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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0103300-02
CDS Infomation

cds chromosome:IRGSP-1.0:5:189772:190288:1 gene:Os05g0103300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to AT.I.24-5 protein (Fragment). (Os05t0103300-01);Similar to AT.I.24-5 protein (Fragment). (Os05t0103300-02)
Sequence

ATGCAGGACTGGGGTCCGGTGCTGATATCTTGGGTGCTGTTCATCCTGCTGTCGCCGGGG
CTTCTGTTCCAGATACCAGGCAAGTGCAGGTTGATCGAGTTCGGCAAGTTCCAGACCAGC
GTCGTCTCCATCCTCGTCCACACCATCCTCTTCTTCGCCCTCGACGCCATCTTCCTCGTC
GCCATCGGCGTCCAGATCAACCTTGGCTCCTCTCCCTGA

Peptide Sequence

PEP ID

Os05t0103300-02
PEP Infomation

pep chromosome:IRGSP-1.0:5:189772:190288:1 gene:Os05g0103300 transcript:Os05t0103300-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to AT.I.24-5 protein (Fragment). (Os05t0103300-01);Similar to AT.I.24-5 protein (Fragment). (Os05t0103300-02)
Sequence

MQDWGPVLISWVLFILLSPGLLFQIPGKCRLIEFGKFQTSVVSILVHTILFFALDAIFLV
AIGVQINLGSSP

Transcript Sequence

Transcript ID

Os05t0103300-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:189772:190288:1 gene:Os05g0103300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to AT.I.24-5 protein (Fragment). (Os05t0103300-01);Similar to AT.I.24-5 protein (Fragment). (Os05t0103300-02)
Sequence

AAGGAGGAAAGCCTCGAGCATCATCATCAGTAGGAAGAAGAAGAAGAAGAAGAAGAAGAA
GAGCAACAGGAAGAAGCAAGCAAGAAGAGGAAGAAGAAGAAAGCAAGGAGAAGAAGATGC
AGGACTGGGGTCCGGTGCTGATATCTTGGGTGCTGTTCATCCTGCTGTCGCCGGGGCTTC
TGTTCCAGATACCAGGCAAGTGCAGGTTGATCGAGTTCGGCAAGTTCCAGACCAGCGTCG
TCTCCATCCTCGTCCACACCATCCTCTTCTTCGCCCTCGACGCCATCTTCCTCGTCGCCA
TCGGCGTCCAGATCAACCTTGGCTCCTCTCCCTGATTCTCTCTCTTTGTTTCTTCTAGGT
AATCTCAATTGCATATGTATAGCAGTATATATGCACCTCCATCCATCATCTCTACTCACC
TTAGCTCGTTAATTTGTACTACTATTTGTGTGTTCCTTCCAATTCTTGGCATAATATTGT
GACTCAAAGGAATTGATTTCAGAGTTACTCATTACTT