Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0103200-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:185688:188469:1 gene:Os05g0103200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLOPHILIN 20-2 description:Cyclophilin-like domain containing protein. (Os05t0103200-01);Cyclophilin-like domain containing protein. (Os05t0103200-02)
Sequence	ATGGCGGTCGCAACCTCCTTCGCCACACTCGCCATCGCGCGGCCGGCGGCGGAGCGGGCC CTCCTCGCCTCCAAAACCCCCTCGCCGCTCCTCTCCATCCGCACCGGCACCGGCACCGCA CGCCTCCCCTCATCGGCCGTCTTTGGAGGTTTCACTCCTGCGCTTTCCGCTGCTCACAGC CGCGCGCGCTTCGTCTCCTCCGCCACCGCTGACCCCAAGGAAGTGGACCTCCAGTCCAAA ATCACAAACAAGGTGTACTTTGACATAAGCATCGGAAACCCTGTTGGGAAGAACGTTGGG AGGGTCGTTATTGGCCTATACGGGGATGATGTTCCCCAGACCGCAGAGAACTTCCGTGCT CTTTGCACTGGAGAAAAAGGGTTTGGTTACAAGGGGTCCAGTTTCCACCGTGTCATTAAG GACTTCATGATTCAGGGAGGAGACTTTGACAAGGGCAACGGTACTGGAGGGAAAAGCATA TATGGCCGGACCTTCAAAGACGAGAACTTCAAATTGGTTCATACTGGACCTGGAGTGGTC AGCATGGCCAATGCTGGGCCAAACACCAATGGCAGCCAGTTCTTCATCTGCACTGTCAAG ACACCTTGGTTGGATGGGAGGCACGTCGTGTTTGGGCAGGTTATTGAAGGCATGGACATC GTTAAGATGATCGAATCGCAGGAGACTGACAGAGGGGACCGCCCGAAGAAGAAGGTGGTC ATCAGTGAGTGTGGGGAGCTTCCAGTGGTCTAA

Peptide Sequence

PEP ID	Os05t0103200-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:185688:188469:1 gene:Os05g0103200 transcript:Os05t0103200-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLOPHILIN 20-2 description:Cyclophilin-like domain containing protein. (Os05t0103200-01);Cyclophilin-like domain containing protein. (Os05t0103200-02)
Sequence	MAVATSFATLAIARPAAERALLASKTPSPLLSIRTGTGTARLPSSAVFGGFTPALSAAHS RARFVSSATADPKEVDLQSKITNKVYFDISIGNPVGKNVGRVVIGLYGDDVPQTAENFRA LCTGEKGFGYKGSSFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLVHTGPGVV SMANAGPNTNGSQFFICTVKTPWLDGRHVVFGQVIEGMDIVKMIESQETDRGDRPKKKVV ISECGELPVV

Transcript Sequence

Transcript ID	Os05t0103200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:185688:188469:1 gene:Os05g0103200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLOPHILIN 20-2 description:Cyclophilin-like domain containing protein. (Os05t0103200-01);Cyclophilin-like domain containing protein. (Os05t0103200-02)
Sequence	AATCCCAATCCACCTGAGCGAGAGAGAGAGAAAGGGTCTCCTCCTCAACATCAACAATGG CGGTCGCAACCTCCTTCGCCACACTCGCCATCGCGCGGCCGGCGGCGGAGCGGGCCCTCC TCGCCTCCAAAACCCCCTCGCCGCTCCTCTCCATCCGCACCGGCACCGGCACCGCACGCC TCCCCTCATCGGCCGTCTTTGGAGGTTTCACTCCTGCGCTTTCCGCTGCTCACAGCCGCG CGCGCTTCGTCTCCTCCGCCACCGCTGACCCCAAGGAAGTGGACCTCCAGTCCAAAATCA CAAACAAGGTGTACTTTGACATAAGCATCGGAAACCCTGTTGGGAAGAACGTTGGGAGGG TCGTTATTGGCCTATACGGGGATGATGTTCCCCAGACCGCAGAGAACTTCCGTGCTCTTT GCACTGGAGAAAAAGGGTTTGGTTACAAGGGGTCCAGTTTCCACCGTGTCATTAAGGACT TCATGATTCAGGGAGGAGACTTTGACAAGGGCAACGGTACTGGAGGGAAAAGCATATATG GCCGGACCTTCAAAGACGAGAACTTCAAATTGGTTCATACTGGACCTGGAGTGGTCAGCA TGGCCAATGCTGGGCCAAACACCAATGGCAGCCAGTTCTTCATCTGCACTGTCAAGACAC CTTGGTTGGATGGGAGGCACGTCGTGTTTGGGCAGGTTATTGAAGGCATGGACATCGTTA AGATGATCGAATCGCAGGAGACTGACAGAGGGGACCGCCCGAAGAAGAAGGTGGTCATCA GTGAGTGTGGGGAGCTTCCAGTGGTCTAATAGGTGCCAGAGGGCTAATCTTCTTCCCCCG GAGACTTTGCTGTTTTTGGTTTCATAGTAAGCTGTGAACTTATCGCATGTTCTCCGCGCA GTCAGAGATCATGCTGAGTTGAGGCCAAGATTTCTAAGTTGAGAAGAATCCTCTATTGTT CGGCTGGAATAAAACGTTCTTACCTGTCGAGGGTCAGGAAATAATGTTGTGGTTCATGAA AGATCAAATGTCTGTCTTTTCGTGCATACGCAGACTAAAGTTACTCCTTTCCCAAT