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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0102500-02
CDS Infomation

cds chromosome:IRGSP-1.0:5:149964:152021:-1 gene:Os05g0102500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0102500-01);Conserved hypothetical protein. (Os05t0102500-02)
Sequence

CGCGGTCGCAGTGGTGGTGTGCCGGCGGCGGTGGAAGAGGAAGAGGAAGACGAAGAAGCA
GCAGCCAGCAGCAGGTCTCTGCTACACACTACACTCAAGAGAGCGAGAGGCATGGAACAC
TACTCGACCAAGTTCAGCAATGGAGGAGGGAGACTAGTAGACCCCATGCCCGACCGAAGG
TCAAGATTTTGGCAGATGGATTCCCAACCCACCGAGCTCATCTGTCCCATGCCTCGCCGC
CCGTCACCCCGCCCTCCTTTCCTATCCGACTCCATCAACAGGACATTACCGGTGTACAGA
GCTGACTCTGCTTCTGATGTCCTCGACCTCATCCTCAGTAAGAATGACCCTGATGTTGAT
ACTGATTCGAGCACCCAGGTGGGCTTTTTCTGTGGCTCACCTCCTGTGCGCGCTAACAAC
CCCATTGTCCATGATCCACAGTTTGGTAAAAACATACCTTCCTTTTCTCCTTTAGGGAGT
TCTTTCGGCAAAAAGTCTGCTGGAAGAGCTGAAGTAGGTTCTCCATCTTGCGGGGCAAGC
AGCCCAAAAGTTAGAATTGAAGGTTTTGCTTGTGGGAACAAGGAGCCCCACTGTGCAGTC
ACCTTTGCCTGA

Peptide Sequence

PEP ID

Os05t0102500-02
PEP Infomation

pep chromosome:IRGSP-1.0:5:149964:152021:-1 gene:Os05g0102500 transcript:Os05t0102500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0102500-01);Conserved hypothetical protein. (Os05t0102500-02)
Sequence

RGRSGGVPAAVEEEEEDEEAAASSRSLLHTTLKRARGMEHYSTKFSNGGGRLVDPMPDRR
SRFWQMDSQPTELICPMPRRPSPRPPFLSDSINRTLPVYRADSASDVLDLILSKNDPDVD
TDSSTQVGFFCGSPPVRANNPIVHDPQFGKNIPSFSPLGSSFGKKSAGRAEVGSPSCGAS
SPKVRIEGFACGNKEPHCAVTFA

Transcript Sequence

Transcript ID

Os05t0102500-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:149964:152021:-1 gene:Os05g0102500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0102500-01);Conserved hypothetical protein. (Os05t0102500-02)
Sequence

ATCGCGGTCGCAGTGGTGGTGTGCCGGCGGCGGTGGAAGAGGAAGAGGAAGACGAAGAAG
CAGCAGCCAGCAGCAGGTCTCTGCTACACACTACACTCAAGAGAGCGAGAGGCATGGAAC
ACTACTCGACCAAGTTCAGCAATGGAGGAGGGAGACTAGTAGACCCCATGCCCGACCGAA
GGTCAAGATTTTGGCAGATGGATTCCCAACCCACCGAGCTCATCTGTCCCATGCCTCGCC
GCCCGTCACCCCGCCCTCCTTTCCTATCCGACTCCATCAACAGGACATTACCGGTGTACA
GAGCTGACTCTGCTTCTGATGTCCTCGACCTCATCCTCAGTAAGAATGACCCTGATGTTG
ATACTGATTCGAGCACCCAGGTGGGCTTTTTCTGTGGCTCACCTCCTGTGCGCGCTAACA
ACCCCATTGTCCATGATCCACAGTTTGGTAAAAACATACCTTCCTTTTCTCCTTTAGGGA
GTTCTTTCGGCAAAAAGTCTGCTGGAAGAGCTGAAGTAGGTTCTCCATCTTGCGGGGCAA
GCAGCCCAAAAGTTAGAATTGAAGGTTTTGCTTGTGGGAACAAGGAGCCCCACTGTGCAG
TCACCTTTGCCTGAGCATTCTCATTGACCCTAACGCTATCCTGCCACCAAAACTTGTAAA
TTTTCCGTGTGCTGAGGAGGGCATAAATTAGTTTATTTTGGGCTTCTTTTTGTCGAGTTG
AGTTGGCATTGCCCTTCTGATTGTGGCTTTTGAAACTGCACAATCGCAGAGAGCTTTCGG
ATGTACATAAATGAGGTCTCCCGTCTGTAGCTATATCATCTTGTGTGTGTACAAAAGGTA
GTAACATCCAGGTCCATGGTGTCGGTCAGTCTGTAAATATGTGTCGGTCAGTCTGTAAAT
ACTGTAGTGTACTGGCATGTAAGATGCAATCAATCGATCAATTAATGTGAAAAATCCTCA
TTAGTCTGCT