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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0101300-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:95909:96901:-1 gene:Os05g0101300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os05t0101300-01)
Sequence

ATGAGTATGGAGATATCCATGGAGAAGAATTTGGAGAAGCGGTCGCGCAAGAGGAGCAGG
TACCTCTCCCCTCCCTACACCTTCCCCTTCACTACAGTCACTGTCCAAGACGACGTGTCC
GTATCCGATTCCGATCAGTCGGAGGACCTCACCAATGTCGCCGTGGCGGACATGCTGTCG
GCGCTCCACGCCGCCGCGCTCTTGGACATGGATGCTGCCAATGTCCACCTGCTCCGCCGC
TTCTTTACCCTGCACAAGACCACCTCCCCTTCTTCCTCCTCAACCCGTATCAACGCTCAA
GCTGAATTCAATCCAAGCAGCAGCCGCCAAAAGGAGGAGGAGACTACTAGTAAAACCAAG
AAGAAGAAGAAGAAAGAAGCAGCAGCAGCAGCTTCTACTCCAACAACAACAATCAGGCTC
CCACTCACGGATGTTAGGAACAATCTCCAGAAGATGATCTCCTCACTGCTGGGCCGCTCG
CCTACAGCTACTGCTACCGCTAGCCATGACCATGGAGCAAAGCTTGCGCTTGCGGGAGAG
ATGCGAGGCCTTTTGGCCAAAGTTGACAAGATGCTCTCTGCCACTACCCCTGCCAATCGC
CACTAA

Peptide Sequence

PEP ID

Os05t0101300-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:95909:96901:-1 gene:Os05g0101300 transcript:Os05t0101300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os05t0101300-01)
Sequence

MSMEISMEKNLEKRSRKRSRYLSPPYTFPFTTVTVQDDVSVSDSDQSEDLTNVAVADMLS
ALHAAALLDMDAANVHLLRRFFTLHKTTSPSSSSTRINAQAEFNPSSSRQKEEETTSKTK
KKKKKEAAAAASTPTTTIRLPLTDVRNNLQKMISSLLGRSPTATATASHDHGAKLALAGE
MRGLLAKVDKMLSATTPANRH

Transcript Sequence

Transcript ID

Os05t0101300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:95909:96901:-1 gene:Os05g0101300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os05t0101300-01)
Sequence

AGTCGACGTCTCCTCCCAAGTCCAAACGGTGCCATTGAGATCGAACTCGAAGAGAGATAC
TAGTAGTCGATGAGTATGGAGATATCCATGGAGAAGAATTTGGAGAAGCGGTCGCGCAAG
AGGAGCAGGTACCTCTCCCCTCCCTACACCTTCCCCTTCACTACAGTCACTGTCCAAGAC
GACGTGTCCGTATCCGATTCCGATCAGTCGGAGGACCTCACCAATGTCGCCGTGGCGGAC
ATGCTGTCGGCGCTCCACGCCGCCGCGCTCTTGGACATGGATGCTGCCAATGTCCACCTG
CTCCGCCGCTTCTTTACCCTGCACAAGACCACCTCCCCTTCTTCCTCCTCAACCCGTATC
AACGCTCAAGCTGAATTCAATCCAAGCAGCAGCCGCCAAAAGGAGGAGGAGACTACTAGT
AAAACCAAGAAGAAGAAGAAGAAAGAAGCAGCAGCAGCAGCTTCTACTCCAACAACAACA
ATCAGGCTCCCACTCACGGATGTTAGGAACAATCTCCAGAAGATGATCTCCTCACTGCTG
GGCCGCTCGCCTACAGCTACTGCTACCGCTAGCCATGACCATGGAGCAAAGCTTGCGCTT
GCGGGAGAGATGCGAGGCCTTTTGGCCAAAGTTGACAAGATGCTCTCTGCCACTACCCCT
GCCAATCGCCACTAAGCTCCATCTGCTTCCCCACTGTGGAGTACTCACTCCTCCTACCTT
AGGAGTATCTACTAATTAAGGTAGCTAGCTGCTGCTAATCTCCGCATCATCTCATGTTAA
CCACTCCACTTGTTAATGTATGGCTCTAGAGTTGCATGAATGTATGGATCTATGCTTATA
TGCACCTCCTCACTAGTCTGCCTCT