Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0690800-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:35337067:35338179:1 gene:Os04g0690800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOTOSYSTEM II SUBUNIT description:22-kDa Photosystem II protein, Photoprotection (Os04t0690800-01)
Sequence	ATGGCTCTGCAGCAGAGCATGGCGATGCCGATGATGGTAGTGTCTGACCTTGGCACCGCT CCTCGGTCATCGCCGATGGTTCAGCTGCAGAGGATGAAGAAGCATCTGGTGGTGGTGGCG GCGTTCAAGAGCAGAACCAAGGCTTCCCCCAAGGTGGACAAGTCGAACAAGAACAAGTCG ATCGTGGAGGACGGCATCTTCGGCACCTCCGGCGGCATCGGGTTCACCAAGGAGAACGAG CTGTTCGTGGGGAGGGTGGCCATGCTGGGGTTCGCGGCGTCCCTCCTCGGCGAGGCGGTC ACCGGCAAGGGCATCCTGGCGCAGCTCAACCTGGAGACGGGCATCCCCATCTACGAGGCC GAGCCGCTGCTCCTCTTCTTCATCCTCTTCACGCTGCTGGGCGCCATCGGCGCGCTGGGC GACCGGGGGCGCTTCGTGGACGACGCCACCGGGCTGGAGCGCGCCGTGATCCCGCCGGGG AAGGGGTTCCGCGCGGCGCTGGGGCTCAGCGAGGGTGGCCCGCTGTTCGGGTTCACCAAG GCGAACGAGCTCTTCGTGGGTCGCCTCGCGCAGCTGGGGATCGCCTTCTCCCTCATCGGC GAGATCATCACCGGGAAGGGCGCGCTGGCGCAGCTCAACATCGAGACCGGCGTCCCCATC AACGAGATCGAGCCGCTCCTCCTCTTCAACATCCTCTTCTTCTTCTTCGCCGCCATCAAC CCCGGAACCGGCAAGTTCGTCACCGACGACAACGACGACCAATGA

Peptide Sequence

PEP ID	Os04t0690800-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:35337067:35338179:1 gene:Os04g0690800 transcript:Os04t0690800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOTOSYSTEM II SUBUNIT description:22-kDa Photosystem II protein, Photoprotection (Os04t0690800-01)
Sequence	MALQQSMAMPMMVVSDLGTAPRSSPMVQLQRMKKHLVVVAAFKSRTKASPKVDKSNKNKS IVEDGIFGTSGGIGFTKENELFVGRVAMLGFAASLLGEAVTGKGILAQLNLETGIPIYEA EPLLLFFILFTLLGAIGALGDRGRFVDDATGLERAVIPPGKGFRAALGLSEGGPLFGFTK ANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGVPINEIEPLLLFNILFFFFAAIN PGTGKFVTDDNDDQ

Transcript Sequence

Transcript ID	Os04t0690800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:35337067:35338179:1 gene:Os04g0690800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOTOSYSTEM II SUBUNIT description:22-kDa Photosystem II protein, Photoprotection (Os04t0690800-01)
Sequence	ATTCCAAGAGAGCAAGCCAAGATCAAGAGATCGATCATATCGTATTTTGTAGTAATTTAG CAGCTAGCTAGTGCAGCTGCAAGCTATTAGCGACTGCATGCTTTGATCGATCCATCTAGC TAATTGTTGAATCCATCTAAGCTTAATGGCTCTGCAGCAGAGCATGGCGATGCCGATGAT GGTAGTGTCTGACCTTGGCACCGCTCCTCGGTCATCGCCGATGGTTCAGCTGCAGAGGAT GAAGAAGCATCTGGTGGTGGTGGCGGCGTTCAAGAGCAGAACCAAGGCTTCCCCCAAGGT GGACAAGTCGAACAAGAACAAGTCGATCGTGGAGGACGGCATCTTCGGCACCTCCGGCGG CATCGGGTTCACCAAGGAGAACGAGCTGTTCGTGGGGAGGGTGGCCATGCTGGGGTTCGC GGCGTCCCTCCTCGGCGAGGCGGTCACCGGCAAGGGCATCCTGGCGCAGCTCAACCTGGA GACGGGCATCCCCATCTACGAGGCCGAGCCGCTGCTCCTCTTCTTCATCCTCTTCACGCT GCTGGGCGCCATCGGCGCGCTGGGCGACCGGGGGCGCTTCGTGGACGACGCCACCGGGCT GGAGCGCGCCGTGATCCCGCCGGGGAAGGGGTTCCGCGCGGCGCTGGGGCTCAGCGAGGG TGGCCCGCTGTTCGGGTTCACCAAGGCGAACGAGCTCTTCGTGGGTCGCCTCGCGCAGCT GGGGATCGCCTTCTCCCTCATCGGCGAGATCATCACCGGGAAGGGCGCGCTGGCGCAGCT CAACATCGAGACCGGCGTCCCCATCAACGAGATCGAGCCGCTCCTCCTCTTCAACATCCT CTTCTTCTTCTTCGCCGCCATCAACCCCGGAACCGGCAAGTTCGTCACCGACGACAACGA CGACCAATGAGCCCAGCCCACCCCTCATTTTGCTTTTACTCCACTTAATTAAATTAGCTT CTTCTGATAGTAGTAAGGAGACGGTTAAGTGGACTAGCTAGTCAATGTCAATCCTCTCCT CTGTACTGTAGTGGAGTAGTATCTACTTATATGCATATACTAGCAAAAATTCAGGACACA ACAATCAATCGGTACTCCTGAATGCATGATGGG