Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0690300-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:35310316:35315659:1 gene:Os04g0690300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0814G11.17 protein. (Os04t0690300-01)
Sequence

ATGGGGAACATGACCCGCTCCGACTCCCCCATCTCCCGCCTCATCGTCCTCTCCTTCCTC
GATTTCCTCAACTCCGTTGAGTTAGCTCCTGGGGCTGATCCTGAAGCTCTTGAGGTTGCC
AGGGAATGTCTGGAATCCATTTTCAGTATCAACTCTTCATCTGTTGTTGAAAGGGTACAT
CCAGGACTTCTACTTGAACTCTTTAGCTCTATGGAAGCTGCTCAACAAGATAACTCTGCA
CCCGGCCCGGTATCCAACAAACCTTCTTGCAGTGCGAGCACTTCAACTATCCAAGAAGAC
CTGACTAAATGTACAACATCAAATAGTGAAGGCCAAAATGAAGATACCTTCGACTTAGAT
CATTCAGGAGATGAACTGTTTGCAAAATTCTATACCTCGCTTGATGAAATCAATTTCTTT
AAAACATCATCTGCTGGAGCTGAAGATCCTGGCCAGCTTTCAAAAGCAACACAATTCTTC
GATGATGCATTGCTGGGGATGCGGAAGTCAGGAAGGAAAAGGGCAAGCTTAGGAGACCTT
GCAGAATTCTTCAAGTCAAAAGGTAATGAATTCATGAGGTCAAAACAACATCTTAAAGCT
GTAGAACTGTACACCTGTGCTATTGCGTTGAGCCGAAATAATGCTATTTACTATTGTAAC
AGGGCTGCTGCATATACCCTTCTTAATATGTTCAATGAAGCTGTTGAGGATTGCCTGAAG
TCAATTGAAATTGACCCTAACTACAGTAAAGCATACAGCCGACTTGGATCTGCTTATTTT
GCTTTGGGAAAATACCACGATGCTTTGTACAAGGGATATTTGAAAGCCTCCGAGCTTGAT
CCTAGTAATGAAAATGTCTGGCAGAATATCGAGGTTACCAAAAAGAAGCTGGCTGAACAG
CGAGGTCCACCAGAAGAACAGAATACATACGCACCCCAAAGTCAAGCATCACATGGACAG
TTTCCTGGTCAATCAAGCAGTGGTGTTCCATTCACGTTTTTTCCTCCTGGAAATTCTCCA
ACTCCTGAGTTCTTCGCCAATATCATCAACCGTGTGTCTGATATCAGTCAACAATCATCT
GAGCATTCCATAAATATAAATTTGAATGACATTTTTAATCATGCAAATGTCAATGGGAAC
AGTCAAGGAACACCTCAGACAGAGACTTCAAGTAACCATACCCCACCTCCTTCTTTTCCA
ACCAATACTGCAGTCCCTCCTCCTTTTTCGTTCACGGGCTCTACTGAAGGAAATCGCCCA
CAACAAACTTCAAGTGGACATGAAGGGGAGCATGGCCAACCAGGCATGCACAGGGATGCT
GGCATCCAAATAAACTTGGCAGGACCAGAGCAGGCTGCAGACGCTATGAGAGCTGTGATG
GAGATGCTCGCGCCCCATATGAGCCAACGTGAAGGTGCACCTGGGTCTGCTAGAGGACCA
GGCTAG

Peptide Sequence

PEP ID

Os04t0690300-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:35310316:35315659:1 gene:Os04g0690300 transcript:Os04t0690300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0814G11.17 protein. (Os04t0690300-01)
Sequence

MGNMTRSDSPISRLIVLSFLDFLNSVELAPGADPEALEVARECLESIFSINSSSVVERVH
PGLLLELFSSMEAAQQDNSAPGPVSNKPSCSASTSTIQEDLTKCTTSNSEGQNEDTFDLD
HSGDELFAKFYTSLDEINFFKTSSAGAEDPGQLSKATQFFDDALLGMRKSGRKRASLGDL
AEFFKSKGNEFMRSKQHLKAVELYTCAIALSRNNAIYYCNRAAAYTLLNMFNEAVEDCLK
SIEIDPNYSKAYSRLGSAYFALGKYHDALYKGYLKASELDPSNENVWQNIEVTKKKLAEQ
RGPPEEQNTYAPQSQASHGQFPGQSSSGVPFTFFPPGNSPTPEFFANIINRVSDISQQSS
EHSININLNDIFNHANVNGNSQGTPQTETSSNHTPPPSFPTNTAVPPPFSFTGSTEGNRP
QQTSSGHEGEHGQPGMHRDAGIQINLAGPEQAADAMRAVMEMLAPHMSQREGAPGSARGP
G

Transcript Sequence

Transcript ID

Os04t0690300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:35310316:35315659:1 gene:Os04g0690300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0814G11.17 protein. (Os04t0690300-01)
Sequence

AAAGGTAAACAGGAGGCAGGCAGTCGCGCGTCTCCGGTCGCCGCCGTCGTCTCCGGCCGG
GCGGCGATGGGGAACATGACCCGCTCCGACTCCCCCATCTCCCGCCTCATCGTCCTCTCC
TTCCTCGATTTCCTCAACTCCGTTGAGTTAGCTCCTGGGGCTGATCCTGAAGCTCTTGAG
GTTGCCAGGGAATGTCTGGAATCCATTTTCAGTATCAACTCTTCATCTGTTGTTGAAAGG
GTACATCCAGGACTTCTACTTGAACTCTTTAGCTCTATGGAAGCTGCTCAACAAGATAAC
TCTGCACCCGGCCCGGTATCCAACAAACCTTCTTGCAGTGCGAGCACTTCAACTATCCAA
GAAGACCTGACTAAATGTACAACATCAAATAGTGAAGGCCAAAATGAAGATACCTTCGAC
TTAGATCATTCAGGAGATGAACTGTTTGCAAAATTCTATACCTCGCTTGATGAAATCAAT
TTCTTTAAAACATCATCTGCTGGAGCTGAAGATCCTGGCCAGCTTTCAAAAGCAACACAA
TTCTTCGATGATGCATTGCTGGGGATGCGGAAGTCAGGAAGGAAAAGGGCAAGCTTAGGA
GACCTTGCAGAATTCTTCAAGTCAAAAGGTAATGAATTCATGAGGTCAAAACAACATCTT
AAAGCTGTAGAACTGTACACCTGTGCTATTGCGTTGAGCCGAAATAATGCTATTTACTAT
TGTAACAGGGCTGCTGCATATACCCTTCTTAATATGTTCAATGAAGCTGTTGAGGATTGC
CTGAAGTCAATTGAAATTGACCCTAACTACAGTAAAGCATACAGCCGACTTGGATCTGCT
TATTTTGCTTTGGGAAAATACCACGATGCTTTGTACAAGGGATATTTGAAAGCCTCCGAG
CTTGATCCTAGTAATGAAAATGTCTGGCAGAATATCGAGGTTACCAAAAAGAAGCTGGCT
GAACAGCGAGGTCCACCAGAAGAACAGAATACATACGCACCCCAAAGTCAAGCATCACAT
GGACAGTTTCCTGGTCAATCAAGCAGTGGTGTTCCATTCACGTTTTTTCCTCCTGGAAAT
TCTCCAACTCCTGAGTTCTTCGCCAATATCATCAACCGTGTGTCTGATATCAGTCAACAA
TCATCTGAGCATTCCATAAATATAAATTTGAATGACATTTTTAATCATGCAAATGTCAAT
GGGAACAGTCAAGGAACACCTCAGACAGAGACTTCAAGTAACCATACCCCACCTCCTTCT
TTTCCAACCAATACTGCAGTCCCTCCTCCTTTTTCGTTCACGGGCTCTACTGAAGGAAAT
CGCCCACAACAAACTTCAAGTGGACATGAAGGGGAGCATGGCCAACCAGGCATGCACAGG
GATGCTGGCATCCAAATAAACTTGGCAGGACCAGAGCAGGCTGCAGACGCTATGAGAGCT
GTGATGGAGATGCTCGCGCCCCATATGAGCCAACGTGAAGGTGCACCTGGGTCTGCTAGA
GGACCAGGCTAGACCTGAGGAACAAGACGAGTGTAACAGTTCAATTCTTGACTTTGGTAA
CAGTTTAGTAGGAGTACGGGTATATTCTCATGTTCTTTTTGGTACTTTTGTTTGCCAACC
AACCATGGAAGCTCATATCGGGATTGGGCACGTTATATCTGTTTATTGGCATCTTAATTT
CTTGCTGTATCTTCTATGCTTGCATTCTCTCTGCATATAAGCATTGATGTAGTATCATGA
ATTCATGATAAGCCTATGTTGGTCATGTTTGGTGAAGTATATTATGCTAAAATTTTGGAG
GGAATTGAGTACT