Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0689900-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:35287781:35289153:1 gene:Os04g0689900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pathogenesis-related protein 5 precursor (PR-5). (Os04t0689900-01)
Sequence	GATGCATGCTCCGATCCTACGTACAATCAAGCTAGGAGCTGTAATTTGATCGATCGATCG ATCCAATTGGTACCTAATAAAGTAAGAATGGCAAGAGGTGGTGTTGTGTGGTTGGCTGTG GCCCTCCTGTGCTGCTGCTTTGTGAGGCATTGTGAGTCGGCCCGCGTGTTCACCATCATC AACCAGTGCAAGACGATGGTCTGGCCGGCGGTGACGCCCGGCGAGAGCTTCGGCGGCGGA GGGTTCGCGCTGAAGCCGGGGCAATCGATGGTGTTCACGGCGCCGGTGGGGTGGTCGGGG CGCATCTGGGGTCGGACGGAGTGCGACTTCGACCAGGCGGGCAACGGCTCCTGCGCCACG GGGTCCTGCGGGTCGGAGCTCAAGTGCGGCGGCTCCGGCGCCACCCCGGCCACGCTCGCC GAGTTCACCCTCGCCACCAAGGACTTCTACGACGTCAGCCTCGTGGACGGCTTCAACCTC CCCATGGTGGTGCGCCCTCTCAACGGGGAGGGCAACTGCTCGGTGGCCGGGTGCGACGGC GACCTGCGGGACAGCTGCCCGTCGGAGCTGTCGAAGAAGGTGAACGGGAGGACGGTGGCG TGCCGGAGCGCCTGCGACGTCTTCGACACCGACCAGTACTGCTGCAGGGGGATGTACGGC AACCCGTCGACGTGCCAGCCCACCTTCTACTCCAAGAAGTTCAAGGCCGCCTGCCCCACC GCCTACAGCTACGCCTACGACGATCCCACCAGCATCTTCACCTGCTCCAACGCCGACTAC ACCATCACCTTCTGCTCCACCAGGAAGCGACCTGTGTGCACGTACCACAACAATCGCCTT ATCTGCAGCGCCTCCACCCGATCTTGGCCTAGTGTCATTTCTGCGCTGCTCTTCACTTTT CTGGCTTTGCAGTTTTCGCTCTAA

Peptide Sequence

PEP ID	Os04t0689900-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:35287781:35289153:1 gene:Os04g0689900 transcript:Os04t0689900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pathogenesis-related protein 5 precursor (PR-5). (Os04t0689900-01)
Sequence	DACSDPTYNQARSCNLIDRSIQLVPNKVRMARGGVVWLAVALLCCCFVRHCESARVFTII NQCKTMVWPAVTPGESFGGGGFALKPGQSMVFTAPVGWSGRIWGRTECDFDQAGNGSCAT GSCGSELKCGGSGATPATLAEFTLATKDFYDVSLVDGFNLPMVVRPLNGEGNCSVAGCDG DLRDSCPSELSKKVNGRTVACRSACDVFDTDQYCCRGMYGNPSTCQPTFYSKKFKAACPT AYSYAYDDPTSIFTCSNADYTITFCSTRKRPVCTYHNNRLICSASTRSWPSVISALLFTF LALQFSL

Transcript Sequence

Transcript ID	Os04t0689900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:35287781:35289153:1 gene:Os04g0689900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pathogenesis-related protein 5 precursor (PR-5). (Os04t0689900-01)
Sequence	GATGCATGCTCCGATCCTACGTACAATCAAGCTAGGAGCTGTAATTTGATCGATCGATCG ATCCAATTGGTACCTAATAAAGTAAGAATGGCAAGAGGTGGTGTTGTGTGGTTGGCTGTG GCCCTCCTGTGCTGCTGCTTTGTGAGGCATTGTGAGTCGGCCCGCGTGTTCACCATCATC AACCAGTGCAAGACGATGGTCTGGCCGGCGGTGACGCCCGGCGAGAGCTTCGGCGGCGGA GGGTTCGCGCTGAAGCCGGGGCAATCGATGGTGTTCACGGCGCCGGTGGGGTGGTCGGGG CGCATCTGGGGTCGGACGGAGTGCGACTTCGACCAGGCGGGCAACGGCTCCTGCGCCACG GGGTCCTGCGGGTCGGAGCTCAAGTGCGGCGGCTCCGGCGCCACCCCGGCCACGCTCGCC GAGTTCACCCTCGCCACCAAGGACTTCTACGACGTCAGCCTCGTGGACGGCTTCAACCTC CCCATGGTGGTGCGCCCTCTCAACGGGGAGGGCAACTGCTCGGTGGCCGGGTGCGACGGC GACCTGCGGGACAGCTGCCCGTCGGAGCTGTCGAAGAAGGTGAACGGGAGGACGGTGGCG TGCCGGAGCGCCTGCGACGTCTTCGACACCGACCAGTACTGCTGCAGGGGGATGTACGGC AACCCGTCGACGTGCCAGCCCACCTTCTACTCCAAGAAGTTCAAGGCCGCCTGCCCCACC GCCTACAGCTACGCCTACGACGATCCCACCAGCATCTTCACCTGCTCCAACGCCGACTAC ACCATCACCTTCTGCTCCACCAGGAAGCGACCTGTGTGCACGTACCACAACAATCGCCTT ATCTGCAGCGCCTCCACCCGATCTTGGCCTAGTGTCATTTCTGCGCTGCTCTTCACTTTT CTGGCTTTGCAGTTTTCGCTCTAATTAATTAATTGATTATTGGCATGGATGAGAAAACCA ACCTGACATATATGCTAGTACTCTAGTCTTCTTGCCTGGACGATCCATCTGAGAAGCAAA CGGTACGCGCGCGCTACAGCTGGTGCTTGCTTGTACGTTTCATCACATCACACGCATGAG ATTTGTTCATTCACATGTGAATACAGTACTACTGTATATATATACGTATATCATTCAGTA GAGAGAGACAACAGTAGTAGCATAAGTGGATGTGCCTTTTCCTCTGTTTTTTTCTCAATC ATATATATGTACCCTGCGGGCCAGTCCAATGGAGACAACAGTACGCACCCCTCATGAATC ATGATATGATATGATCCATTTCTCCGAGTCC