Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0689700-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:35280703:35282692:1 gene:Os04g0689700 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA recognition motif, RNP-1 domain containing protein. (Os04t0689700-01)
Sequence

ATGGTGACATCCGATGAAGATGCTAAGAAGGCGTATGCTGATTTCGAGAAGAAGGTCAAG
AGGACGATCTATATTGATCATCTTTCCCCTCAAGTCACGAGCTCAGTAATTAAAGCAGCT
CTTGCCCAATGTCCAAATGTTGTCGATGTGGAGTTCATTGTTAATTACACAGTCCCGTAT
GACATTCCTTCTGCTGCATTGGTGGAATTGGATGACGAAATACAAGCTAAGGCTGCACTA
GACTTGATGAATGATTTCCCTTTCATAATTGGCGGGATGCCAAGGCCTGTAAGAGCTATA
TGTGCAAAGCCCGAGATGTTTCGGGAGCGCCCTCCTCACCCTGGCATCAGGAAAGAGTTC
CGGTGGGTAAAACAAGAAGATGGAACAGAGTATCAAGGAATGAAGAAATTGAGGATCCTA
GCAAAAAGGCAAGAAGTAGAAAATATGGCACTCATAAAGAATCAATTGGAAGAGGAGAAG
GAGCTGGCAAAGCAGCAACAGGAATTACTCGATGGAAATTACAATAAGTACGACATGCTG
GAGAATGTCGTACAGAACGGAAACATGAAGAGCCTAGCTCAGCATTATGGAGTCAGCCTG
GCCGATGAGTTTTGA

Peptide Sequence

PEP ID

Os04t0689700-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:35280703:35282692:1 gene:Os04g0689700 transcript:Os04t0689700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA recognition motif, RNP-1 domain containing protein. (Os04t0689700-01)
Sequence

MVTSDEDAKKAYADFEKKVKRTIYIDHLSPQVTSSVIKAALAQCPNVVDVEFIVNYTVPY
DIPSAALVELDDEIQAKAALDLMNDFPFIIGGMPRPVRAICAKPEMFRERPPHPGIRKEF
RWVKQEDGTEYQGMKKLRILAKRQEVENMALIKNQLEEEKELAKQQQELLDGNYNKYDML
ENVVQNGNMKSLAQHYGVSLADEF

Transcript Sequence

Transcript ID

Os04t0689700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:35280703:35282692:1 gene:Os04g0689700 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA recognition motif, RNP-1 domain containing protein. (Os04t0689700-01)
Sequence

GCAATCTCCGCTGCTTCCCTCCCATCGCTCCTTCTCATCGGCATCGGCATCGCCATCGCT
ATTCTCCGAGTATCTTCTCCTTACCTTGGCGGCATAAAAGAAGGAAAATCTGTCTCCTCC
GCTCCTTGCGCCGCCAAGACGAGTCGCAGCTGAACAAAACAAGGGAGGAGAGGCGCCTTT
CTGATTCATCTTTCTCTCCCATCGGGACTACTTTTGTCTGGATAATTCTTGCGTTCGTTC
GTTAACCCTAGCTTCTCTTCTAGATCTGGAAGAGACTCTTCTTTTAATTTCAGAATACAA
GTAACAGTTTGGGGGTTCTCAAGTTGGATCCGCCCCTGCTCCCATGGTGACATCCGATGA
AGATGCTAAGAAGGCGTATGCTGATTTCGAGAAGAAGGTCAAGAGGACGATCTATATTGA
TCATCTTTCCCCTCAAGTCACGAGCTCAGTAATTAAAGCAGCTCTTGCCCAATGTCCAAA
TGTTGTCGATGTGGAGTTCATTGTTAATTACACAGTCCCGTATGACATTCCTTCTGCTGC
ATTGGTGGAATTGGATGACGAAATACAAGCTAAGGCTGCACTAGACTTGATGAATGATTT
CCCTTTCATAATTGGCGGGATGCCAAGGCCTGTAAGAGCTATATGTGCAAAGCCCGAGAT
GTTTCGGGAGCGCCCTCCTCACCCTGGCATCAGGAAAGAGTTCCGGTGGGTAAAACAAGA
AGATGGAACAGAGTATCAAGGAATGAAGAAATTGAGGATCCTAGCAAAAAGGCAAGAAGT
AGAAAATATGGCACTCATAAAGAATCAATTGGAAGAGGAGAAGGAGCTGGCAAAGCAGCA
ACAGGAATTACTCGATGGAAATTACAATAAGTACGACATGCTGGAGAATGTCGTACAGAA
CGGAAACATGAAGAGCCTAGCTCAGCATTATGGAGTCAGCCTGGCCGATGAGTTTTGACA
ATCCAATCCATGAGCTGCTCGCTCACTCATAAGTCCGGTCTAGTTCCCGCCTTCCCGGTG
CAGCAACATGCCTAATAACCTTTTTTTTTTCTCTCTCCCTCTCCCTCTCCCTCCCCACCT
CTCTCTCTCGGCCTTTAGGGCAGTGATAAATCATGTCAATGTGTGAGATGAAGTAATAAT
CCAATGACTGGTTTGAGGCACGCATTAGGCGTGATCAAAGGCATATCCTTTGTGTAAAGA
TAGTTGCCTGCCTGCTATAATTTATCTGGAGGGGCTATTGACAACAGCACTGGTTTCTTC
CTTGTGATTCTCTGACGTCCTGCGAGATGGTTACCATAATTTCAGAGACTCGTGGATGTA
TTGATAAGTTATTTCGAGGAGGAGAAGGCGTCTGTTGTAGGCCTGACTGAAGTTAGCTGT
AGAGTGTATGGAACTGGAAGTCTTAAAATTTTGGCCTTGTTTACTTCCTTGCCATTCTCA
ACTATTCGAAATTTTGGTGATACC