Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0687100-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:35120757:35124119:-1 gene:Os04g0687100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Soluble inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho- hydrolase) (PPase). (Os04t0687100-01)
Sequence	ATGAGTGAAGAGGACACCAATGCTGCTGCTGGGCAGCCCAGGCGCGCCCCTAAGCTCAAC GAGAGGATCCTGTCCTCCTTGTCGAGGAGATCAGTAGCTGCACATCCGTGGCATGATCTT GAGATCGGCCCTGGTGCTCCTGCTGTCTTCAACGTTGTTGTTGAGATCACCAAGGGAAGC AAAGTGAAATATGAGCTTGACAAGAAAACTGGACTGATTAAGGTCGACCGTGTCCTATAC TCATCAGTTGTGTATCCCCATAATTATGGTTTCATTCCAAGGACACTTTGTGAAGACAAT GATCCAATGGATGTTCTGGTCCTGATGCAGGAGCCTGTTATTCCTGGTTCCTTCCTCCGT GCTAGAGCAATTGGCCTTATGCCCATGATTGACCAGGGTGAGAAGGATGACAAGATAATA GCAGTATGTGCTGATGATCCTGAATACCGTCATTACAATGACATCAGTGAGCTGTCTCCT CACCGCCTCCAAGAGATTAAACGCTTCTTTGAAGACTACAAGAAGAATGAGAACAAGGAG GTTGCTGTTGATGCATTCTTGCCTGCCAACACTGCTCGTGACGCCATTCAGTACTCCATG GACCTGTATGCGCAATATATCTTGCAAAGCTTGAGGCAGTAG

Peptide Sequence

PEP ID	Os04t0687100-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:35120757:35124119:-1 gene:Os04g0687100 transcript:Os04t0687100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Soluble inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho- hydrolase) (PPase). (Os04t0687100-01)
Sequence	MSEEDTNAAAGQPRRAPKLNERILSSLSRRSVAAHPWHDLEIGPGAPAVFNVVVEITKGS KVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPMDVLVLMQEPVIPGSFLR ARAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDISELSPHRLQEIKRFFEDYKKNENKE VAVDAFLPANTARDAIQYSMDLYAQYILQSLRQ

Transcript Sequence

Transcript ID	Os04t0687100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:35120757:35124119:-1 gene:Os04g0687100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Soluble inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho- hydrolase) (PPase). (Os04t0687100-01)
Sequence	AGTGCAGTGCAGGGAATCATTTCATTTCTTCTTCTTCTTCGCCGCCGCCGCCACCTTCCA CCCCTTCAGCCGCCACTCCAATCCAAGGAGGATGAGTGAAGAGGACACCAATGCTGCTGC TGGGCAGCCCAGGCGCGCCCCTAAGCTCAACGAGAGGATCCTGTCCTCCTTGTCGAGGAG ATCAGTAGCTGCACATCCGTGGCATGATCTTGAGATCGGCCCTGGTGCTCCTGCTGTCTT CAACGTTGTTGTTGAGATCACCAAGGGAAGCAAAGTGAAATATGAGCTTGACAAGAAAAC TGGACTGATTAAGGTCGACCGTGTCCTATACTCATCAGTTGTGTATCCCCATAATTATGG TTTCATTCCAAGGACACTTTGTGAAGACAATGATCCAATGGATGTTCTGGTCCTGATGCA GGAGCCTGTTATTCCTGGTTCCTTCCTCCGTGCTAGAGCAATTGGCCTTATGCCCATGAT TGACCAGGGTGAGAAGGATGACAAGATAATAGCAGTATGTGCTGATGATCCTGAATACCG TCATTACAATGACATCAGTGAGCTGTCTCCTCACCGCCTCCAAGAGATTAAACGCTTCTT TGAAGACTACAAGAAGAATGAGAACAAGGAGGTTGCTGTTGATGCATTCTTGCCTGCCAA CACTGCTCGTGACGCCATTCAGTACTCCATGGACCTGTATGCGCAATATATCTTGCAAAG CTTGAGGCAGTAGAGTGCTACCCGATCTTTATCGTGAAAATATTGTATTTGTGCCAACTG CAAAACTGGAGTAGAGACTTTGTTCACAAAAATGGAGTGCTATGGGGCTGGCTATGATTT CCTTTACCCTCCAGCTGTGTATCAATTTGCATGTGGTTTCATACTTACAAATTATGAATA AGTGAAGTTTGGGCAGACATGAATTTGTTCTGTGTC