Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0686800-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:35111460:35112512:1 gene:Os04g0686800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0701F11.2 protein. (Os04t0686800-01)
Sequence

ATGGCGGCCATGATGAACAACGAGAGATCAAGCAGCAACAAGCTGCAGGTTGACGCCGAG
AACCCGGCGGCGGTGGGCGACGAGCTGGACCTGGCGGCGCGCGCCAACTGGCTGCGGGCG
GCGGTGCTGGGCGCGAACGACGGGCTGGTGTCGACGGCGTCGCTGATGCTGGGGGTGGGC
GCCGTGAAGGCGGAGGCGCGCGCCATGGTCATCTCCGGCTTCGCGGGCCTCCTGGCGGGC
GCCTGCAGCATGGCCATCGGGGAGTTCGTGTCCGTGTGCTCGCAGCGCGATGTGGAGCTG
GCGCAGCTGGAGCGCGATGGCAAGCGCGGCGGGGAGGAGGAGAAGGCCCTGCCGAGCCCC
GCGCAGGCGGCGGCGGCGTCGGCCATGGCGTTCTCGGTGGGCGCCGTGGTGCCGCTGCTG
GCGGCCGGGTTCATCGTCAACTACAGGCTGCGGATCGCGGTGGTGGTGGCGGTGGCGAGC
GTGGCGCTGGCGGCGTTCGGGTGCGTGGGCGCGGTGCTGGGGCGGGCGGCGGTGGCGCGG
TCGAGCGCGAGGGTGGTGCTCGGTGGGTGGGCCGCCATGGGCATCACCTTCGGCCTCATG
AGGCTCTTCAAGGCCAGCGGCATATGA

Peptide Sequence

PEP ID

Os04t0686800-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:35111460:35112512:1 gene:Os04g0686800 transcript:Os04t0686800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0701F11.2 protein. (Os04t0686800-01)
Sequence

MAAMMNNERSSSNKLQVDAENPAAVGDELDLAARANWLRAAVLGANDGLVSTASLMLGVG
AVKAEARAMVISGFAGLLAGACSMAIGEFVSVCSQRDVELAQLERDGKRGGEEEKALPSP
AQAAAASAMAFSVGAVVPLLAAGFIVNYRLRIAVVVAVASVALAAFGCVGAVLGRAAVAR
SSARVVLGGWAAMGITFGLMRLFKASGI

Transcript Sequence

Transcript ID

Os04t0686800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:35111460:35112512:1 gene:Os04g0686800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0701F11.2 protein. (Os04t0686800-01)
Sequence

GCCCATCCATCCACTCGATCGATCTCAGCTAATTAATTAAGCTAACAGGCCAGCCAATCA
GCCATGGCGGCCATGATGAACAACGAGAGATCAAGCAGCAACAAGCTGCAGGTTGACGCC
GAGAACCCGGCGGCGGTGGGCGACGAGCTGGACCTGGCGGCGCGCGCCAACTGGCTGCGG
GCGGCGGTGCTGGGCGCGAACGACGGGCTGGTGTCGACGGCGTCGCTGATGCTGGGGGTG
GGCGCCGTGAAGGCGGAGGCGCGCGCCATGGTCATCTCCGGCTTCGCGGGCCTCCTGGCG
GGCGCCTGCAGCATGGCCATCGGGGAGTTCGTGTCCGTGTGCTCGCAGCGCGATGTGGAG
CTGGCGCAGCTGGAGCGCGATGGCAAGCGCGGCGGGGAGGAGGAGAAGGCCCTGCCGAGC
CCCGCGCAGGCGGCGGCGGCGTCGGCCATGGCGTTCTCGGTGGGCGCCGTGGTGCCGCTG
CTGGCGGCCGGGTTCATCGTCAACTACAGGCTGCGGATCGCGGTGGTGGTGGCGGTGGCG
AGCGTGGCGCTGGCGGCGTTCGGGTGCGTGGGCGCGGTGCTGGGGCGGGCGGCGGTGGCG
CGGTCGAGCGCGAGGGTGGTGCTCGGTGGGTGGGCCGCCATGGGCATCACCTTCGGCCTC
ATGAGGCTCTTCAAGGCCAGCGGCATATGATCGATCGATCACTAGCTAGTTAATTAAGCT
CTCTGCTCTACTACTAAGTTCATTTTTTTTTAAAACTTACTGCATTAATTAAACTAAACT
AAAACTGCATATGCATGTGGACGACGATGATGTTTTGGCGCCATGAGCGCATGATATATA
CGAGCGCACATGCACGCGTTCTTCGTGTTCGATCTTTCCTCTCCTCCTCGATCTCCTCTG
CTTACAAGAGATTGCTTGTCTAGCTGCTCCGGCTGCCTATCGAGGCTAACTAATAGTCGA
TCGACGACTTTACGTAGCAAAAGTAAAACCATTAAGCCTTGTACTCAGCTCCATACATAT
ATATAATAATAATAATAATAATAATAATCCATG