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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0686600-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:35089396:35091243:-1 gene:Os04g0686600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0723C07.12 protein. (Os04t0686600-01)
Sequence

ATGGCGAGCACGCCGGAGCCGGAGACGACGGTGGGAGGCTACGAGCTGCGGGAGCGGCTG
GGCGGCCGGCCGCCGTCCACGGTGGTGTGGCGCGCCGTGGAGCGGTCGAGCGGATCCCCC
GTGGTGGTGAAGCAGGTGCGGCTGACTGGCCTCCCCAGCACCCTCCGCGACAGCCTCGAC
TGCGAGGTCCGCTTCCTCGCCGCCGTCACCCACCCCAACATCATCCGCCTCCTCGACCTC
ATCCAGACCCAGAGCAACCTGTACCTTGTCCTGGAGCTGTGCGAGGGAGGAGACCTGGCG
GCCTACATCCAGCGCAACGGGAGGGTAGAGGAGCGCGTCGCCAGCAATTTCATGAGACAG
ATCGGTAATTCACCTAGTAATATTTGCCATATCAATTTCATTTCTAGCCCTAGTAGCATC
TCTTTTCTCTTGTTGCCCCCCAATCTATCACATTACCCGCAACCTTAG

Peptide Sequence

PEP ID

Os04t0686600-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:35089396:35091243:-1 gene:Os04g0686600 transcript:Os04t0686600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0723C07.12 protein. (Os04t0686600-01)
Sequence

MASTPEPETTVGGYELRERLGGRPPSTVVWRAVERSSGSPVVVKQVRLTGLPSTLRDSLD
CEVRFLAAVTHPNIIRLLDLIQTQSNLYLVLELCEGGDLAAYIQRNGRVEERVASNFMRQ
IGNSPSNICHINFISSPSSISFLLLPPNLSHYPQP

Transcript Sequence

Transcript ID

Os04t0686600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:35089396:35091243:-1 gene:Os04g0686600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0723C07.12 protein. (Os04t0686600-01)
Sequence

ATTTCCTTTCCAGTGGTTTCGCGATGGCGAGCACGCCGGAGCCGGAGACGACGGTGGGAG
GCTACGAGCTGCGGGAGCGGCTGGGCGGCCGGCCGCCGTCCACGGTGGTGTGGCGCGCCG
TGGAGCGGTCGAGCGGATCCCCCGTGGTGGTGAAGCAGGTGCGGCTGACTGGCCTCCCCA
GCACCCTCCGCGACAGCCTCGACTGCGAGGTCCGCTTCCTCGCCGCCGTCACCCACCCCA
ACATCATCCGCCTCCTCGACCTCATCCAGACCCAGAGCAACCTGTACCTTGTCCTGGAGC
TGTGCGAGGGAGGAGACCTGGCGGCCTACATCCAGCGCAACGGGAGGGTAGAGGAGCGCG
TCGCCAGCAATTTCATGAGACAGATCGGTAATTCACCTAGTAATATTTGCCATATCAATT
TCATTTCTAGCCCTAGTAGCATCTCTTTTCTCTTGTTGCCCCCCAATCTATCACATTACC
CGCAACCTTAGTTAGTTGTGTTACAAATTTTTTTTTTTGGATCAAAGGGCCTTAGTCCTC
CATTTCCATTAAGAGAAATGTCACAGTTTACAGTAGAGTTGTGTTACAATTACAACAAGA
AGATAATCATGTGTAAGAAATTATGCTTGCCCAACACCTTGTGGTAGGAGCTGGCTTGCA
AGTGCTCCGCAGACACCATATCGTCCATAGGGACTTAAAACCCGAGGTCCACAAATCTCT
CTCTTTTCATCTCTTAATTACTTGTGTTATTAAGCTCTAACTGATTTGAGACACCATTGT
TGACTGATAAAACTGTTGTATGCCGCAGAATATCCTGCTCTCTTCTCCTGACAGCAATGC
GATCCTCAAGATATCTGATTTTGGCCTGTCAAGAGTTCTTCGTCCCGGGGAATACACAGA
TACAAATTGTGGCACTTGTTTGTACATGGCCCCAGAAGTTATGCTGTTTCAGAAGTATGA
TGGTGGGGTAGATTTGTGGAGTATCGCCGCGATTCTCTTCGAGCTCTTGAATGGCTATCC
ACCATTCCGTGGTAGAAGCAATGTCCAGCTGCTTCAATGCATAAACCGAACCGTGTCTCT
TCCATTCTCAGAAGTCGTTATTTCCAAGCTACGTCCTGATTCTATTGATATATGCACCAG
ACTTCTGTGTAGCAATCCAGTGAAAAGGTTGTCCTTCCAAGAGTTCTTCAGCCACAGCTT
CCTCAGACCATAGACGCCTTACTGAAGAGCCTATGCAAGCTTAGCAATATCATCTGAAGT
TCAGGATTAGTTGAATTGTTTGTTTGTTGTACTTGGACATATGCAGGTACCTCTTTGTGT
TCAAAACCTTGTTTTCCTGTAGTCTTCTCTGTAGCCTGTAGACTTTTTACACGAAAAATG
TGAATATAAGTTGGGAGTTCTGT