Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0686200-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:35067307:35074531:-1 gene:Os04g0686200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Chromosome condensation regulator protein (Fragment). (Os04t0686200-01)
Sequence	ATGGCAGATCCCGTCGATATCGACAAGGCACTTATTGCTTTAAAGAAAGGCACCCAACTG CTTAAATATGGTCGCAAGGGGAAGCCAAAATTTACTCCCTTCAGACTATCAAATGATGAA TCAACACTAATTTGGGTCTCAAATAACAAAGAGAAAAGTTTGAAGCTATCATCTGTGTCT AGAGTTCTCTCGGGACAAAGAACATTGGTTTTTCAACGTTTTCTGCTCCCTGAGAAGGAC CATTTATCCTTCTCACTCATATATAATGATGGCAAGCGGTCTCTTGATCTGATCTGCAAG GATAAAGTTGAGGCAGAAGTATGGTTTGCAGGCCTTAATGTATTGATATCTCCTGGACAG CATGGATCCCAACACCAACACATTGATGGAATACGCAACGGTGCCCTGTCTTTTGAGTGT GGCAGAGATAGTAGCCTAAGCAGTAGCTCTGCTTATACAACGGATTCCTTTGAGAATAAG TTGAGCTCAGCGAATTCTGCCAAGGATCGTTCTTCAGGAGAATTTACATATTCAGAAAGG ACAGATGTGTCAGATATGCAAGTGAAAGGTGCTTCTTCAGACATTCGAATCAGTGTTTCC AGTGCTCTCAGCACATCCAGCCATGGTTCTGGAGATGATTCTGAATCTTTTGGAGATGTT TATGTATGGGGGGAAGTCATGTGTGACACTACTTGTAGGCAAGGATCTGACAGTAATGCT TACTCTGCTACTGCAGCTACTGATATTCTTGTACCGAAGCCCTTAGAGTCAAATGTAATG CTTGATGTCAGTTATGTGGCTTGTGGTGTGAAGCACGCGGCACTGGTTACTCGACAGGCA GAGGTATTTACATGGGGAGAAGAATGCAGTGGCCGTCTTGGTCATGGGGCCGGCACAAGC ATTTTTCAACCACGTCTTGTTGAGTCATTGTCTATCTGCAATGTCGAAACAATTGCCTGT GGTGAATTCCATACTTGTGCTATCACTGCAACTGGTGACCTTTACACCTGGGGAGATGGT ACCCACAACGCTGGACTCCTTGGTCATGGAAGTAACGTGAGCCACTGGATTCCAAAAAGA GTTTCAGGTCCTTTGGAGGGCCTTCAGGTGTCAGCTGTTTCTTGTGGCACATGGCATACT GCTTTGATAACCAGTTCTGGAAAATTGTACACGTTTGGTGATGGCACATTTGGAGTCTTA GGTCATGGAAATAGAGAAACTATTTCATACCCGAAAGAAGTGGAGTCATTGAAGGGTTTG AGGACAATTTCTGTTTCATGTGGGGTGTGGCATACTGCTGCTGTTGTTGAGGTTATCATG GCACAGTCAAATACTTCATCTGGAAAGCTATTTACATGGGGTGATGGAGATAAATATCGC CTTGGGCATGGTGACAGGTCTTCAAAACTGAAACCAACCTGTGTGCCTTCATTAATAGAT TACAATTTCCATAAGGCTGTGTGTGGTCATACTCTAACAATTGGATTGACTACTTCAGGC CATATATTTACTGCTGGGAGCTCTGTGTATGGACAGCTTGGCAATCCCAATAATGATGGA AGGTATCCACGCCTAGTTGAAGAGAAGCTTGGTGGTGGTGGTGTTGTGGAAGTTGCGTGT GGAGCTTATCATGTTGCGGTATTGACACAGAGCGGTGAAGTCTACACATGGGGTAAGGGT GCAAATGGAAGATTGGGTCATGGTGATATTGCAGATCGTAAGACACCTACATTTGTTGAG GCTTTAAGGGATAGGTCTGTAAAACGCATCGCTTGTGGATCAGGCTTCACAGCTGCAATT TGTCAACATAAATCGGTGTCTGGGATGGAGCAGTCTCAGTGCTCATCATGCAGACAGCCA TTTGGGTTCACCCGAAAGAGGCACAACTGTTATAACTGTGGATTAGTACACTGCCATTCC TGCAGTTCAAAAAAGGCTCTAAGAGCAGCATTGTCCCCTAATCCTGGAAAGCCATATCGC GTATGTGATTCATGTTACCTGAAACTAAGTAAAGTTTTGGATTCTGGAATCGGTCATAAC AAGAACAATACGCCTCGCATACCAGGTGATTCCAAGGCTGATAAAATGGACTCAAAGGGA AACAGAGTTGCATCCGCTAATAGCTCAGATATGATCAAGAACTTGGATGTGAAGGCAGCA AAGCAGACAAAGAAGTATGACTATCCACCACAGTTCCCTGCGATTTTGCAGCTGAAGGAC ATCCCTTTCATTGGGGCTGCTGACCAGCAACCTAATGACTCCACATATAGTTCACCTTTG TTGAGGCTGCCAAATCTGAATTCTTCTAGTTCCTTGTCCTCAGAAAGCTTTGATATTCTT AGAGATGCAAATGAACTTCTGAAGCAAGAGGTTCAAAAACTAAAAGAAGAGGTTAACAGC TTGAGGCAGCAACGTGAACAGCAAGATGCAGATTTGCAGAAATCAGAGGCAAAAGCTCAT GAGGCCATGACCCTGGCCTCTGAAGAAGCATCCAAATCGAAGGCTGCAAAGGATGTTATT AAATCACTAACAGCACAGCTAAAAGAAATGGCTGAAAGGCTTCCTCCAGCATCATGTGAC ACGAAGCAAACACGGCAGCCTTATCTACCTGGTGGTGCAGTTTCTCCTGATACAGGGAGA GAAAACCAAAAGAGATATGAGCCAGGCAGCTTCCAGTACCCACAAACACCTACTTCTGTT GCATCGGCCCGGTTTAATGGGTTCCTTGCTCAAGCCCATCAAATAAGTGAACCCAATGGT AACACGATGGTTCCACATGACAGCAGGCATGAAAACAATGGCAACACTAAGGAGTTCCCA GTTGCGCAGCAGATGACCAATGGTGGGATGACGGGGTATCGCCCAAGAACAGAAGATCAT GATCGGCGGGAAACAGAAAGGTTCCAAATAAACCTCCATGGTTTCAACATGAGAGGTTCT AGCTCACCCAGCAACCAAGTCGAAGCTGAATGGATAGAACAATACGAACCAGGGGTATAC TTAACACTAGTTTCTCTTCGTGATGGAACCAAGGAGCTGAAAAGAGTGCGGTTCAGCCGG AGAAGATTTGGAGAGCATCAGGCGGAATCATGGTGGAATGACAACCGTGAAAAAGTGTAC GACAAATACAACGTGCGGGGAACTGATCGGATTTCTTCAGTGATGACAGCGTAG

Peptide Sequence

PEP ID	Os04t0686200-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:35067307:35074531:-1 gene:Os04g0686200 transcript:Os04t0686200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Chromosome condensation regulator protein (Fragment). (Os04t0686200-01)
Sequence	MADPVDIDKALIALKKGTQLLKYGRKGKPKFTPFRLSNDESTLIWVSNNKEKSLKLSSVS RVLSGQRTLVFQRFLLPEKDHLSFSLIYNDGKRSLDLICKDKVEAEVWFAGLNVLISPGQ HGSQHQHIDGIRNGALSFECGRDSSLSSSSAYTTDSFENKLSSANSAKDRSSGEFTYSER TDVSDMQVKGASSDIRISVSSALSTSSHGSGDDSESFGDVYVWGEVMCDTTCRQGSDSNA YSATAATDILVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTS IFQPRLVESLSICNVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKR VSGPLEGLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVESLKGL RTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLID YNFHKAVCGHTLTIGLTTSGHIFTAGSSVYGQLGNPNNDGRYPRLVEEKLGGGGVVEVAC GAYHVAVLTQSGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSGFTAAI CQHKSVSGMEQSQCSSCRQPFGFTRKRHNCYNCGLVHCHSCSSKKALRAALSPNPGKPYR VCDSCYLKLSKVLDSGIGHNKNNTPRIPGDSKADKMDSKGNRVASANSSDMIKNLDVKAA KQTKKYDYPPQFPAILQLKDIPFIGAADQQPNDSTYSSPLLRLPNLNSSSSLSSESFDIL RDANELLKQEVQKLKEEVNSLRQQREQQDADLQKSEAKAHEAMTLASEEASKSKAAKDVI KSLTAQLKEMAERLPPASCDTKQTRQPYLPGGAVSPDTGRENQKRYEPGSFQYPQTPTSV ASARFNGFLAQAHQISEPNGNTMVPHDSRHENNGNTKEFPVAQQMTNGGMTGYRPRTEDH DRRETERFQINLHGFNMRGSSSPSNQVEAEWIEQYEPGVYLTLVSLRDGTKELKRVRFSR RRFGEHQAESWWNDNREKVYDKYNVRGTDRISSVMTA

Transcript Sequence

Transcript ID	Os04t0686200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:35067307:35074531:-1 gene:Os04g0686200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Chromosome condensation regulator protein (Fragment). (Os04t0686200-01)
Sequence	ACTCCCTGCACGACCCCACTCCCTCTCCACTCCACCACCTCCTCCTCCTCCACTCCCCAC CTCGCCGCCGCAAGCGCCCGGCCGCCACCACCACCGCCGCCGCCCTCTTCGTCTCTCTAT CTTCAATCTTCGCCTACCTTGTCTCCTCCATTCTTCAACCTTGGCTTCCTTCCATTTCGG CGCCACTATTCTTTCTTTTTCTTTTCTTTTCCTTTCTTTTCTGAGTCGCTGTGTTGGAAG CCAGCCTTGGAGGCATTCATGAGCGCCCGACGACCAGCTCCATGATGACCGGAGGCCGCC GATGGAATGGCAGATCCCGTCGATATCGACAAGGCACTTATTGCTTTAAAGAAAGGCACC CAACTGCTTAAATATGGTCGCAAGGGGAAGCCAAAATTTACTCCCTTCAGACTATCAAAT GATGAATCAACACTAATTTGGGTCTCAAATAACAAAGAGAAAAGTTTGAAGCTATCATCT GTGTCTAGAGTTCTCTCGGGACAAAGAACATTGGTTTTTCAACGTTTTCTGCTCCCTGAG AAGGACCATTTATCCTTCTCACTCATATATAATGATGGCAAGCGGTCTCTTGATCTGATC TGCAAGGATAAAGTTGAGGCAGAAGTATGGTTTGCAGGCCTTAATGTATTGATATCTCCT GGACAGCATGGATCCCAACACCAACACATTGATGGAATACGCAACGGTGCCCTGTCTTTT GAGTGTGGCAGAGATAGTAGCCTAAGCAGTAGCTCTGCTTATACAACGGATTCCTTTGAG AATAAGTTGAGCTCAGCGAATTCTGCCAAGGATCGTTCTTCAGGAGAATTTACATATTCA GAAAGGACAGATGTGTCAGATATGCAAGTGAAAGGTGCTTCTTCAGACATTCGAATCAGT GTTTCCAGTGCTCTCAGCACATCCAGCCATGGTTCTGGAGATGATTCTGAATCTTTTGGA GATGTTTATGTATGGGGGGAAGTCATGTGTGACACTACTTGTAGGCAAGGATCTGACAGT AATGCTTACTCTGCTACTGCAGCTACTGATATTCTTGTACCGAAGCCCTTAGAGTCAAAT GTAATGCTTGATGTCAGTTATGTGGCTTGTGGTGTGAAGCACGCGGCACTGGTTACTCGA CAGGCAGAGGTATTTACATGGGGAGAAGAATGCAGTGGCCGTCTTGGTCATGGGGCCGGC ACAAGCATTTTTCAACCACGTCTTGTTGAGTCATTGTCTATCTGCAATGTCGAAACAATT GCCTGTGGTGAATTCCATACTTGTGCTATCACTGCAACTGGTGACCTTTACACCTGGGGA GATGGTACCCACAACGCTGGACTCCTTGGTCATGGAAGTAACGTGAGCCACTGGATTCCA AAAAGAGTTTCAGGTCCTTTGGAGGGCCTTCAGGTGTCAGCTGTTTCTTGTGGCACATGG CATACTGCTTTGATAACCAGTTCTGGAAAATTGTACACGTTTGGTGATGGCACATTTGGA GTCTTAGGTCATGGAAATAGAGAAACTATTTCATACCCGAAAGAAGTGGAGTCATTGAAG GGTTTGAGGACAATTTCTGTTTCATGTGGGGTGTGGCATACTGCTGCTGTTGTTGAGGTT ATCATGGCACAGTCAAATACTTCATCTGGAAAGCTATTTACATGGGGTGATGGAGATAAA TATCGCCTTGGGCATGGTGACAGGTCTTCAAAACTGAAACCAACCTGTGTGCCTTCATTA ATAGATTACAATTTCCATAAGGCTGTGTGTGGTCATACTCTAACAATTGGATTGACTACT TCAGGCCATATATTTACTGCTGGGAGCTCTGTGTATGGACAGCTTGGCAATCCCAATAAT GATGGAAGGTATCCACGCCTAGTTGAAGAGAAGCTTGGTGGTGGTGGTGTTGTGGAAGTT GCGTGTGGAGCTTATCATGTTGCGGTATTGACACAGAGCGGTGAAGTCTACACATGGGGT AAGGGTGCAAATGGAAGATTGGGTCATGGTGATATTGCAGATCGTAAGACACCTACATTT GTTGAGGCTTTAAGGGATAGGTCTGTAAAACGCATCGCTTGTGGATCAGGCTTCACAGCT GCAATTTGTCAACATAAATCGGTGTCTGGGATGGAGCAGTCTCAGTGCTCATCATGCAGA CAGCCATTTGGGTTCACCCGAAAGAGGCACAACTGTTATAACTGTGGATTAGTACACTGC CATTCCTGCAGTTCAAAAAAGGCTCTAAGAGCAGCATTGTCCCCTAATCCTGGAAAGCCA TATCGCGTATGTGATTCATGTTACCTGAAACTAAGTAAAGTTTTGGATTCTGGAATCGGT CATAACAAGAACAATACGCCTCGCATACCAGGTGATTCCAAGGCTGATAAAATGGACTCA AAGGGAAACAGAGTTGCATCCGCTAATAGCTCAGATATGATCAAGAACTTGGATGTGAAG GCAGCAAAGCAGACAAAGAAGTATGACTATCCACCACAGTTCCCTGCGATTTTGCAGCTG AAGGACATCCCTTTCATTGGGGCTGCTGACCAGCAACCTAATGACTCCACATATAGTTCA CCTTTGTTGAGGCTGCCAAATCTGAATTCTTCTAGTTCCTTGTCCTCAGAAAGCTTTGAT ATTCTTAGAGATGCAAATGAACTTCTGAAGCAAGAGGTTCAAAAACTAAAAGAAGAGGTT AACAGCTTGAGGCAGCAACGTGAACAGCAAGATGCAGATTTGCAGAAATCAGAGGCAAAA GCTCATGAGGCCATGACCCTGGCCTCTGAAGAAGCATCCAAATCGAAGGCTGCAAAGGAT GTTATTAAATCACTAACAGCACAGCTAAAAGAAATGGCTGAAAGGCTTCCTCCAGCATCA TGTGACACGAAGCAAACACGGCAGCCTTATCTACCTGGTGGTGCAGTTTCTCCTGATACA GGGAGAGAAAACCAAAAGAGATATGAGCCAGGCAGCTTCCAGTACCCACAAACACCTACT TCTGTTGCATCGGCCCGGTTTAATGGGTTCCTTGCTCAAGCCCATCAAATAAGTGAACCC AATGGTAACACGATGGTTCCACATGACAGCAGGCATGAAAACAATGGCAACACTAAGGAG TTCCCAGTTGCGCAGCAGATGACCAATGGTGGGATGACGGGGTATCGCCCAAGAACAGAA GATCATGATCGGCGGGAAACAGAAAGGTTCCAAATAAACCTCCATGGTTTCAACATGAGA GGTTCTAGCTCACCCAGCAACCAAGTCGAAGCTGAATGGATAGAACAATACGAACCAGGG GTATACTTAACACTAGTTTCTCTTCGTGATGGAACCAAGGAGCTGAAAAGAGTGCGGTTC AGCCGGAGAAGATTTGGAGAGCATCAGGCGGAATCATGGTGGAATGACAACCGTGAAAAA GTGTACGACAAATACAACGTGCGGGGAACTGATCGGATTTCTTCAGTGATGACAGCGTAG TGTGATAATACCAGCTAGAAGCTAAATTCTCAAACTGATTCAGATCTCAGAAGAGATCTT TTTTTCCCTCGCCTAAATGTATTTGATGATGCTCTCTTCCTGACTATCTTCTCCTGTACT ATTGTTGTATAGAAGGAATCAGAATTGATGATGTGTCGTATGAATAGGGTAATACAGTGC AGTGAGGTTGCTCTGTTGACCATGATACGAGGCTGTGTATGTCTGTATGTATATTCGTGG GAGTTAGTGGACGAGTCTTGAGCAAAAGCTCCTTCATTTACATGAATGAAACGGAATGCT CTTGG