Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0685000-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:34988985:34989978:1 gene:Os04g0685000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OVATE family protein 12, ovate family protein 17, OVATE-domain containing protein 17 description:Protein of unknown function DUF623, plant domain containing protein. (Os04t0685000-01)
Sequence	ATGGTTCGGAAGCTTGTTGCCTCTCTCTTCCTCGGCGGCGGCGGCGGCGGCGGCGGCGGC AATGATGCCTGTAGCCTGTCGTCGTCGTCGAGCACGGCGTCGTCGTGGCAATGGCCTTCG TGCACGCAGGCGAGGACGCTCTCCTTCGCCAGGCACGACGCCCCAGCAAGCGCAGACGAC GACGACAGCAAGCGGCGGCGGCAGCAGGAGGAGGAGGAAGACGACTACTGCGTCTACAAG ACGAGCGTGATGAACCCGGCCTTCTTCCTCGACGACCACTCCACCTGCCGCTCCTACTCC TCCGCCGCCTCCGCCGTCAACGACGTCGTCGACGACGACGACGAGGTGATCATCCGCGGG CTCCGGTCGTCGAACCGCCGCCTCTTCTTCGAGCCCGAGTCGACGAGCTCCATCGTCGTC AAGGGACGCGCCGTCGACGCCGACGCGGCGGCGTTCGACGGGGCGACGGCGATGTCCATC GACTCGGCCGACCCGTACGGAGACTTCCGGCGGTCGATGGAGGAGATGGTGATGAGCCAC ATGAGTGGCGGGGGCCATGACTGGGGGTGGCTGGAGGAGATGCTCGGCTGGTACCTGAGG GCCAACGGCAAGAAGACCCATGGCTTCATCGTCGGAGCATTCGTCGACTTGGTCGTGGCG CTCGCGTCTTCTCCTTCCTCCGCCACCGCCTCCTCCTCCGCCTTCCAGCTGCCTCTCCAG AAAGGCAGCCAGATTAACTAA

Peptide Sequence

PEP ID	Os04t0685000-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:34988985:34989978:1 gene:Os04g0685000 transcript:Os04t0685000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OVATE family protein 12, ovate family protein 17, OVATE-domain containing protein 17 description:Protein of unknown function DUF623, plant domain containing protein. (Os04t0685000-01)
Sequence	MVRKLVASLFLGGGGGGGGGNDACSLSSSSSTASSWQWPSCTQARTLSFARHDAPASADD DDSKRRRQQEEEEDDYCVYKTSVMNPAFFLDDHSTCRSYSSAASAVNDVVDDDDEVIIRG LRSSNRRLFFEPESTSSIVVKGRAVDADAAAFDGATAMSIDSADPYGDFRRSMEEMVMSH MSGGGHDWGWLEEMLGWYLRANGKKTHGFIVGAFVDLVVALASSPSSATASSSAFQLPLQ KGSQIN

Transcript Sequence

Transcript ID	Os04t0685000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:34988985:34989978:1 gene:Os04g0685000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OVATE family protein 12, ovate family protein 17, OVATE-domain containing protein 17 description:Protein of unknown function DUF623, plant domain containing protein. (Os04t0685000-01)
Sequence	AAAAGGCCAACTCAGTTTACAGCGACATCCGACATAGCCTAGCTTAAGCTTCATCCATTG ATCGATCACTCTCACACAGCTAGCTGCACGTAAGCTAGCTAGGAGTTAGCTAGCCATGGT TCGGAAGCTTGTTGCCTCTCTCTTCCTCGGCGGCGGCGGCGGCGGCGGCGGCGGCAATGA TGCCTGTAGCCTGTCGTCGTCGTCGAGCACGGCGTCGTCGTGGCAATGGCCTTCGTGCAC GCAGGCGAGGACGCTCTCCTTCGCCAGGCACGACGCCCCAGCAAGCGCAGACGACGACGA CAGCAAGCGGCGGCGGCAGCAGGAGGAGGAGGAAGACGACTACTGCGTCTACAAGACGAG CGTGATGAACCCGGCCTTCTTCCTCGACGACCACTCCACCTGCCGCTCCTACTCCTCCGC CGCCTCCGCCGTCAACGACGTCGTCGACGACGACGACGAGGTGATCATCCGCGGGCTCCG GTCGTCGAACCGCCGCCTCTTCTTCGAGCCCGAGTCGACGAGCTCCATCGTCGTCAAGGG ACGCGCCGTCGACGCCGACGCGGCGGCGTTCGACGGGGCGACGGCGATGTCCATCGACTC GGCCGACCCGTACGGAGACTTCCGGCGGTCGATGGAGGAGATGGTGATGAGCCACATGAG TGGCGGGGGCCATGACTGGGGGTGGCTGGAGGAGATGCTCGGCTGGTACCTGAGGGCCAA CGGCAAGAAGACCCATGGCTTCATCGTCGGAGCATTCGTCGACTTGGTCGTGGCGCTCGC GTCTTCTCCTTCCTCCGCCACCGCCTCCTCCTCCGCCTTCCAGCTGCCTCTCCAGAAAGG CAGCCAGATTAACTAAGCTAAGGCTATAGCTCATCCATGAGCACAATAATTACTACTGTA TTAGCTAGCTAGGTAGAGCAATTAAGCGAGAGACTACGTTTGATTGATTGATCTTGGAAG CATGCATAATGTATGCCATGGCCATGGTATGATT