Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0683900-03
CDS Infomation	cds chromosome:IRGSP-1.0:4:34922259:34924938:-1 gene:Os04g0683900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF296 domain containing protein. (Os04t0683900-01);Protein of unknown function DUF296 domain containing protein. (Os04t0683900-02);Protein of unknown function DUF296 domain containing protein. (Os04t0683900-03)
Sequence	ATGGATGGCAAAGAACTCCTCTCACCGTCCGAACTGTCATACTATGCGCACCAGCAGCAT CAGCATCAGCATCAGCAGCATCAGCAGCAACACCGGATGCTCGGGGGCGGAGGAGGCGGC GGCGGGCATAGCGCGTCGCCGCTCGCCGGGATGCACGGCGGCCCGTCGGTCATCCGACCC ATGCCCAACATGGGGATGAGCCCCACCGCGATCCTCCAGTCCATCGGCCCGGGCCCGCTC GCCGGCATGCAGTTCCAGATGGACGCCGCGCCGCCGCCGCCGCCATTGATGCACAACAGC ATGGCCTCCGTCTCCGCCTCCGCCGGCGCCGGCTCACCCACCGTGCCGCCGTCCGCGACG CCCATGGAGCCGGTCAAGAGGAAGCGAGGCCGCCCGCGCAAGTACGGCCCGGACGGGACC ATGAAGGTGTCCACCGCCGCCGCCGCGCAGCACCAGCAGCAGATGCTGAGCGCGCCGCCG AGGATGGGGTCCGTGTCCGGCGCCGACATGGTTGGCGGCGGCTCAGGGATGGACGACTCG GCGCAGAAGAAGCGGCGCGGGCGGCCGCCGGGGACAGGGAAGAAGCAGCAGCTCTCATCA CCGGTTAAGCTTTCAGGGGGCAATGCGTTCAGTGGCTCAGCTGGAACGAGCTTCACCCCT CACATCATCACGGCATCTCCTTCAGAGGACGTTGCAGGGAAGATCGTGGCGTTCGCCAAC CATTCGTCCAGGGCGGTGTGCGTGCTCTCGGCCACCGGCTCCGTCTCCCGGGTGGTCCTC CGCCACCCGGCCGACGGCGCCATGTCAAGGGTTCACGCCTCCTCCCACTACAAGAACCCT GCCATCTACGAGGGGCTGTACGAGATCTTGAGCATGTCGGGGTGTTACAACCTGATGAAC GAGGGGCAGAGCGACGGGCTGAGCGTGACGCTGTGCAGCCCCGAGAGGCATATCATTGGA GGCGTTCTCGGCGGAGCATTGGTAGCTGCCAGCACCGTTCAGGTGGTACTTGGGAGTTTC GTGCAGGGAGGGTCGAAGCCCAAGTCGAAGAAGGCCGGGAAACAGCAGCAGCAACAGGCG GCGGCGGCGGCCTTCAGCTCGGACTCGCTGACCGGAGGAGGGCAGGACGCGTCGCCGAGC TCCGGCCATAACCAAAATCTAACGCCGCCGCCCCCTGTAACAACGACGGGAGGGTGGCCT AGCTCCGGGATATTTGACACGAGAAGTTCCAACATTGATATCAACTCATCTAGAGGCTAG

Peptide Sequence

PEP ID	Os04t0683900-03
PEP Infomation	pep chromosome:IRGSP-1.0:4:34922259:34924938:-1 gene:Os04g0683900 transcript:Os04t0683900-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF296 domain containing protein. (Os04t0683900-01);Protein of unknown function DUF296 domain containing protein. (Os04t0683900-02);Protein of unknown function DUF296 domain containing protein. (Os04t0683900-03)
Sequence	MDGKELLSPSELSYYAHQQHQHQHQQHQQQHRMLGGGGGGGGHSASPLAGMHGGPSVIRP MPNMGMSPTAILQSIGPGPLAGMQFQMDAAPPPPPLMHNSMASVSASAGAGSPTVPPSAT PMEPVKRKRGRPRKYGPDGTMKVSTAAAAQHQQQMLSAPPRMGSVSGADMVGGGSGMDDS AQKKRRGRPPGTGKKQQLSSPVKLSGGNAFSGSAGTSFTPHIITASPSEDVAGKIVAFAN HSSRAVCVLSATGSVSRVVLRHPADGAMSRVHASSHYKNPAIYEGLYEILSMSGCYNLMN EGQSDGLSVTLCSPERHIIGGVLGGALVAASTVQVVLGSFVQGGSKPKSKKAGKQQQQQA AAAAFSSDSLTGGGQDASPSSGHNQNLTPPPPVTTTGGWPSSGIFDTRSSNIDINSSRG

Transcript Sequence

Transcript ID	Os04t0683900-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:34922259:34924938:-1 gene:Os04g0683900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF296 domain containing protein. (Os04t0683900-01);Protein of unknown function DUF296 domain containing protein. (Os04t0683900-02);Protein of unknown function DUF296 domain containing protein. (Os04t0683900-03)
Sequence	ATCATTTCATCTGATCTAGTATCTCATCTCCTCCTCCCCTCCTTTTCCTTCTCCCCCAAC CAACTCACTCTTCATCTTCAACACCTTGCTGTTCGTCCTCGTCTCGTCGTGCTGATTGTT CAAGAACAGGAGAAAGAAAGGAAGAAGCAGTTTGATTGATCTGTTTCTGTTGGGGGGAGC TCGGTGATCCATGCATGGATGGCAAAGAACTCCTCTCACCGTCCGAACTGTCATACTATG CGCACCAGCAGCATCAGCATCAGCATCAGCAGCATCAGCAGCAACACCGGATGCTCGGGG GCGGAGGAGGCGGCGGCGGGCATAGCGCGTCGCCGCTCGCCGGGATGCACGGCGGCCCGT CGGTCATCCGACCCATGCCCAACATGGGGATGAGCCCCACCGCGATCCTCCAGTCCATCG GCCCGGGCCCGCTCGCCGGCATGCAGTTCCAGATGGACGCCGCGCCGCCGCCGCCGCCAT TGATGCACAACAGCATGGCCTCCGTCTCCGCCTCCGCCGGCGCCGGCTCACCCACCGTGC CGCCGTCCGCGACGCCCATGGAGCCGGTCAAGAGGAAGCGAGGCCGCCCGCGCAAGTACG GCCCGGACGGGACCATGAAGGTGTCCACCGCCGCCGCCGCGCAGCACCAGCAGCAGATGC TGAGCGCGCCGCCGAGGATGGGGTCCGTGTCCGGCGCCGACATGGTTGGCGGCGGCTCAG GGATGGACGACTCGGCGCAGAAGAAGCGGCGCGGGCGGCCGCCGGGGACAGGGAAGAAGC AGCAGCTCTCATCACCGGTTAAGCTTTCAGGGGGCAATGCGTTCAGTGGCTCAGCTGGAA CGAGCTTCACCCCTCACATCATCACGGCATCTCCTTCAGAGGACGTTGCAGGGAAGATCG TGGCGTTCGCCAACCATTCGTCCAGGGCGGTGTGCGTGCTCTCGGCCACCGGCTCCGTCT CCCGGGTGGTCCTCCGCCACCCGGCCGACGGCGCCATGTCAAGGGTTCACGCCTCCTCCC ACTACAAGAACCCTGCCATCTACGAGGGGCTGTACGAGATCTTGAGCATGTCGGGGTGTT ACAACCTGATGAACGAGGGGCAGAGCGACGGGCTGAGCGTGACGCTGTGCAGCCCCGAGA GGCATATCATTGGAGGCGTTCTCGGCGGAGCATTGGTAGCTGCCAGCACCGTTCAGGTGG TACTTGGGAGTTTCGTGCAGGGAGGGTCGAAGCCCAAGTCGAAGAAGGCCGGGAAACAGC AGCAGCAACAGGCGGCGGCGGCGGCCTTCAGCTCGGACTCGCTGACCGGAGGAGGGCAGG ACGCGTCGCCGAGCTCCGGCCATAACCAAAATCTAACGCCGCCGCCCCCTGTAACAACGA CGGGAGGGTGGCCTAGCTCCGGGATATTTGACACGAGAAGTTCCAACATTGATATCAACT CATCTAGAGGCTAGCTTCATCTCTCAATTTGTCGACTCTTCCATATGTGCTCCAGAAATT TGTTTTTCTGATTCCCAAAGAATTACCCCCAAAATTGTACTCCTCTCTGTAATAGCCTGT TCAGTTTTTGAGCCGTTAATTCTTATAGATTATTATTATTCACTAGGCAACGTTGCATTC ATGCATGCATGCATGCTCAGAGTTGTGTAATCCCAACAGGATAATCTTGCTTTTCTTTCA GCGAC