Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0683800-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:34915815:34919982:1 gene:Os04g0683800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phosphoribosyltransferase (Fragment). (Os04t0683800-01)
Sequence

ATGGCGGCATATAAGTTGGGTGTGGAGGTTGCAAGTGCTCATGACCTGATGCCCAAGGAT
GGGCAAGGTTCAGCAAGTGCCTGTGTCGAGCTTACGTTTGATGGCCAGCGGTTCCGCACG
GCTATCAAGGACAAGGATCTGAACCCAGTGTGGAATGAGCGCTTCTACTTCAACGTTTCG
GATCCGTCTAATCTTCCTGAGCTTGCGCTTGAAGCGTACGTCTACAACATCAACAGATCC
ATTGATGGTTCAAGGTCCTTCCTTGGCAAGGTCAGAATTGCTGGAACCTCATTCGTGCCA
TTCCCTGATGCGGTTGTCATGCATTATCCACTGGAGAAGCGTGGGATGTTCTCACGTGTG
AAAGGGGAACTGGGTCTGAAAGTATACATTACCAATGACCCATCCATCAAAGCTTCAAAC
CCTCTCCCAGCAATGGATCCTGTTTCAAACAATCCTCCCCCAACGCCAGCGGAGCAAATA
GCAACTGATATAACCGGTACAAATCTCAGCACAACTCATGAGCACAGGGCTGAGGTGAAA
ACATTGCACACCATAGCTAAGGAGGTGCAGCATCAGCACCATGGGCATGGCCATCTACCA
GCTTCCTTTCCCGACCAACCTTCCAAGTATGCTGTTGACCAGATGAAACCAGAACCTCAA
CAACCCAAGATTGTAAGAATGTATTCAGCAGCCTCTCAGCAACCCATGGACTATGCACTC
AAAGAAACTAGTCCATTTCTTGGTGGCGGACAGGTTGTTGGAGGCCGGGTTATACGTGCC
GAGAAGCATGCCAGTACATATGACCTAGTGGAGCGAATGCAGTATCTTTTTGTACGTGTG
GTTAAGGCACGGGACTTGCCTGACATGGATGTCACTGGAAGCCTAGATCCTTATGTTGAA
GTGAGAGTTGGCAACTACAGGGGTATAACTAGGCACTTTGAGAAGCAGAAGAATCCAGAG
TGGAATGCGGTCTTTGCTTTTTCCAGAGACCGTATGCAGGCAACTATCCTTGAAGTTGTT
GTCAAAGACAAGGATTTGCTAAAAGATGACTTTGTTGGTCTGGTGCGATTTGATCTGAAT
GATGTTCCGATGCGTGTGCCCCCTGACAGTCCATTGGCCCCAGAATGGTACCGCCTCGTT
CATAAAACTGGGGATAAGTCAAGAGGCGAGCTGATGCTTGCAGTTTGGATCGGCACCCAA
GCCGATGAGGCATTTCCTGACGCATGGCATTCAGATGCTGCAACACTTGAGGATCCATCT
GCTGTAACACACATGAAGTCTAAAGTTTACCATGCTCCAAGACTCTGGTACCTGCGAGTC
AATATAATTGAGGCCCAAGATATTGCCATAACTGATAAGACACGCTATCCAGATGTTTTT
GTAAGGGCACAAGTGGGGCATCAGCACGGGAGGACAAAACCTGTTCAAGCTAGAAATTTC
AACCCATTCTGGAATGAGGATCTAATGTTTGTGGCTGCTGAACCTTTTGAGGATCACCTT
ATTCTTTCCCTTGAAGATCGTGTAGCTCCTAACAAAGACGAGGTGCTTGGCCGTGTAATT
ATACCGTTGACAATGATTGATAGAAGAGCCGATGATCGTATTGTCCATGGGAAATGGTTC
AATCTTGAGAAGCCGGTACTTATTGATGTGGATCAATTGAAGAAGGAGAAGTTCTCTACT
CGGCTTCATCTTCGTCTCTGCCTTGATGGAGGGTACCATGTTCTAGATGAGTCCACTAAC
TACAGCAGTGACCTCAGACCAACAGCCAAGCAACTCTGGAAACCGTCCATTGGTTTGCTT
GAGCTTGGAATCCTGGGTGCTCAAGGGATTGTTCCAATGAAAACACGGGATGGAAAAGGT
TCATCAGACACTTACTGTGTTGCTAAGTATGGTTCAAAGTGGGTACGGACACGTACCATC
GTGAACAACCCGGGCCCCAAATTCAATGAACAATATACCTGGGAAGTTTATGATCCTGCA
ACAGTCCTGACTGTCGGTGTTTTTGACAATGGCCAGCTTGGAGAGAAAGGTGGTGAGAAG
ACGTCCAGTTCTAAAGATGCGAAAATCGGCAAGGTTCGGATTCGTCTTTCCACTCTTGAA
ACTGGCCGTGTCTACACTCACTCATATCCCCTCCTGGTTCTACATCCATCGGGGGTAAAA
AAGATGGGTGAATTGCACTTAGCCATACGATTTTCCTCAACTTCATTAGTAAACATGATG
TACCTGTACTCTCGACCTTTGCTACCAAAGATGCACTATGTACGCCCAATACCAGTCCTT
CAGGTTGACATGCTGCGCCATCAAGCTGTCCAGATTGTGTCTGCCCGACTTAGCCGGATG
GAACCACCTCTGAGAAAGGAAGTTGTTGAGTACATGTCAGATGTTGATTCTCACTTGTGG
AGCATGAGACGAAGCAAAGCCAACTTCTTCAGGCTCATGTCAGTCTTCTCAGGCTTGTTT
GCAGTTAGCAAGTGGTTTAATGGTGTGTGTTCATGGAGGAACCCCATTACCACTGTGCTG
GTTCACATCCTATTTATAATGTTGGTGTGCTTTCCAGAGCTCATACTCCCAACAGTGTTC
TTATACATGTTTCTTATAGGGGTTTGGAACTATCGTTACCGACCTTGCTATCCTCCACAC
ATGAACACTAAGATCTCTCATGCGGAGGCTGTCCACCCAGATGAACTTGACGAAGAGTTC
GATACATTCCCAACAAGCAGGAGTCCTGATGTTATTAGGATGAGGTATGATAGGCTGAGG
AGTGTTGCTGGAAGAATACAGACTGTGGTAGGTGATATAGCAACTCAAGGGGAGAGGGTT
CAAGCACTGCTTAGCTGGAGGGATCCTCGGGCCACAGCAATATTTGTCCTCTTTTGTCTC
ATAGCAGCAATAGTCCTGTATGTTACACCACTCCAAGTTCTTGCAGCATTGGCAGGGTTC
TATGTCATGAGGCACCCGAGGTTCAGATATAGGTTGCCTTCAACGCCAGTGAATTTCTTC
AGACGACTGCCAGCAAGGACCGACAGCATGCTATAA

Peptide Sequence

PEP ID

Os04t0683800-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:34915815:34919982:1 gene:Os04g0683800 transcript:Os04t0683800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phosphoribosyltransferase (Fragment). (Os04t0683800-01)
Sequence

MAAYKLGVEVASAHDLMPKDGQGSASACVELTFDGQRFRTAIKDKDLNPVWNERFYFNVS
DPSNLPELALEAYVYNINRSIDGSRSFLGKVRIAGTSFVPFPDAVVMHYPLEKRGMFSRV
KGELGLKVYITNDPSIKASNPLPAMDPVSNNPPPTPAEQIATDITGTNLSTTHEHRAEVK
TLHTIAKEVQHQHHGHGHLPASFPDQPSKYAVDQMKPEPQQPKIVRMYSAASQQPMDYAL
KETSPFLGGGQVVGGRVIRAEKHASTYDLVERMQYLFVRVVKARDLPDMDVTGSLDPYVE
VRVGNYRGITRHFEKQKNPEWNAVFAFSRDRMQATILEVVVKDKDLLKDDFVGLVRFDLN
DVPMRVPPDSPLAPEWYRLVHKTGDKSRGELMLAVWIGTQADEAFPDAWHSDAATLEDPS
AVTHMKSKVYHAPRLWYLRVNIIEAQDIAITDKTRYPDVFVRAQVGHQHGRTKPVQARNF
NPFWNEDLMFVAAEPFEDHLILSLEDRVAPNKDEVLGRVIIPLTMIDRRADDRIVHGKWF
NLEKPVLIDVDQLKKEKFSTRLHLRLCLDGGYHVLDESTNYSSDLRPTAKQLWKPSIGLL
ELGILGAQGIVPMKTRDGKGSSDTYCVAKYGSKWVRTRTIVNNPGPKFNEQYTWEVYDPA
TVLTVGVFDNGQLGEKGGEKTSSSKDAKIGKVRIRLSTLETGRVYTHSYPLLVLHPSGVK
KMGELHLAIRFSSTSLVNMMYLYSRPLLPKMHYVRPIPVLQVDMLRHQAVQIVSARLSRM
EPPLRKEVVEYMSDVDSHLWSMRRSKANFFRLMSVFSGLFAVSKWFNGVCSWRNPITTVL
VHILFIMLVCFPELILPTVFLYMFLIGVWNYRYRPCYPPHMNTKISHAEAVHPDELDEEF
DTFPTSRSPDVIRMRYDRLRSVAGRIQTVVGDIATQGERVQALLSWRDPRATAIFVLFCL
IAAIVLYVTPLQVLAALAGFYVMRHPRFRYRLPSTPVNFFRRLPARTDSML

Transcript Sequence

Transcript ID

Os04t0683800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:34915815:34919982:1 gene:Os04g0683800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phosphoribosyltransferase (Fragment). (Os04t0683800-01)
Sequence

TAGGTGTATCAGTTGTGTGCCATTCTCGTCTCTTCTCCGCGACGCGTTCGCTTTCTCTCC
CACCCAAAACCCCCAGAGAGGGAAGAGAAACGCCTCCCTCCCCTCTCCTGCCCCCGACCC
ACCCTGCACCTCCTTCCTCGTCGACGCCATGGCAGCACCGGAGTGAAGCAGCCAGCCAGC
CGCCCGGATTTCACCATTTGGTCCCGGGTTTCGCCCGGATCTGGGTCTCTCTTCAACCGT
CTTCTCCAATCTGGCGGTGCTATAGCTCGCCGCGCCCGGTTGGGGACAAGGCCCAGTAGG
CGCTAGCCAAACAGTGTTGAGCGCCTCCTCCCCTCCTCGCGCCTCGGCGCACGGCCGGCG
AGAAGGTTTTGAGGGGCGGCGAGCTTCTTCAATCTGCCTCCATCTCGGTTTGAATCGAGT
GGTGTAGCAAATAACATCATTTTCGGAGGCAATGGCGGCATATAAGTTGGGTGTGGAGGT
TGCAAGTGCTCATGACCTGATGCCCAAGGATGGGCAAGGTTCAGCAAGTGCCTGTGTCGA
GCTTACGTTTGATGGCCAGCGGTTCCGCACGGCTATCAAGGACAAGGATCTGAACCCAGT
GTGGAATGAGCGCTTCTACTTCAACGTTTCGGATCCGTCTAATCTTCCTGAGCTTGCGCT
TGAAGCGTACGTCTACAACATCAACAGATCCATTGATGGTTCAAGGTCCTTCCTTGGCAA
GGTCAGAATTGCTGGAACCTCATTCGTGCCATTCCCTGATGCGGTTGTCATGCATTATCC
ACTGGAGAAGCGTGGGATGTTCTCACGTGTGAAAGGGGAACTGGGTCTGAAAGTATACAT
TACCAATGACCCATCCATCAAAGCTTCAAACCCTCTCCCAGCAATGGATCCTGTTTCAAA
CAATCCTCCCCCAACGCCAGCGGAGCAAATAGCAACTGATATAACCGGTACAAATCTCAG
CACAACTCATGAGCACAGGGCTGAGGTGAAAACATTGCACACCATAGCTAAGGAGGTGCA
GCATCAGCACCATGGGCATGGCCATCTACCAGCTTCCTTTCCCGACCAACCTTCCAAGTA
TGCTGTTGACCAGATGAAACCAGAACCTCAACAACCCAAGATTGTAAGAATGTATTCAGC
AGCCTCTCAGCAACCCATGGACTATGCACTCAAAGAAACTAGTCCATTTCTTGGTGGCGG
ACAGGTTGTTGGAGGCCGGGTTATACGTGCCGAGAAGCATGCCAGTACATATGACCTAGT
GGAGCGAATGCAGTATCTTTTTGTACGTGTGGTTAAGGCACGGGACTTGCCTGACATGGA
TGTCACTGGAAGCCTAGATCCTTATGTTGAAGTGAGAGTTGGCAACTACAGGGGTATAAC
TAGGCACTTTGAGAAGCAGAAGAATCCAGAGTGGAATGCGGTCTTTGCTTTTTCCAGAGA
CCGTATGCAGGCAACTATCCTTGAAGTTGTTGTCAAAGACAAGGATTTGCTAAAAGATGA
CTTTGTTGGTCTGGTGCGATTTGATCTGAATGATGTTCCGATGCGTGTGCCCCCTGACAG
TCCATTGGCCCCAGAATGGTACCGCCTCGTTCATAAAACTGGGGATAAGTCAAGAGGCGA
GCTGATGCTTGCAGTTTGGATCGGCACCCAAGCCGATGAGGCATTTCCTGACGCATGGCA
TTCAGATGCTGCAACACTTGAGGATCCATCTGCTGTAACACACATGAAGTCTAAAGTTTA
CCATGCTCCAAGACTCTGGTACCTGCGAGTCAATATAATTGAGGCCCAAGATATTGCCAT
AACTGATAAGACACGCTATCCAGATGTTTTTGTAAGGGCACAAGTGGGGCATCAGCACGG
GAGGACAAAACCTGTTCAAGCTAGAAATTTCAACCCATTCTGGAATGAGGATCTAATGTT
TGTGGCTGCTGAACCTTTTGAGGATCACCTTATTCTTTCCCTTGAAGATCGTGTAGCTCC
TAACAAAGACGAGGTGCTTGGCCGTGTAATTATACCGTTGACAATGATTGATAGAAGAGC
CGATGATCGTATTGTCCATGGGAAATGGTTCAATCTTGAGAAGCCGGTACTTATTGATGT
GGATCAATTGAAGAAGGAGAAGTTCTCTACTCGGCTTCATCTTCGTCTCTGCCTTGATGG
AGGGTACCATGTTCTAGATGAGTCCACTAACTACAGCAGTGACCTCAGACCAACAGCCAA
GCAACTCTGGAAACCGTCCATTGGTTTGCTTGAGCTTGGAATCCTGGGTGCTCAAGGGAT
TGTTCCAATGAAAACACGGGATGGAAAAGGTTCATCAGACACTTACTGTGTTGCTAAGTA
TGGTTCAAAGTGGGTACGGACACGTACCATCGTGAACAACCCGGGCCCCAAATTCAATGA
ACAATATACCTGGGAAGTTTATGATCCTGCAACAGTCCTGACTGTCGGTGTTTTTGACAA
TGGCCAGCTTGGAGAGAAAGGTGGTGAGAAGACGTCCAGTTCTAAAGATGCGAAAATCGG
CAAGGTTCGGATTCGTCTTTCCACTCTTGAAACTGGCCGTGTCTACACTCACTCATATCC
CCTCCTGGTTCTACATCCATCGGGGGTAAAAAAGATGGGTGAATTGCACTTAGCCATACG
ATTTTCCTCAACTTCATTAGTAAACATGATGTACCTGTACTCTCGACCTTTGCTACCAAA
GATGCACTATGTACGCCCAATACCAGTCCTTCAGGTTGACATGCTGCGCCATCAAGCTGT
CCAGATTGTGTCTGCCCGACTTAGCCGGATGGAACCACCTCTGAGAAAGGAAGTTGTTGA
GTACATGTCAGATGTTGATTCTCACTTGTGGAGCATGAGACGAAGCAAAGCCAACTTCTT
CAGGCTCATGTCAGTCTTCTCAGGCTTGTTTGCAGTTAGCAAGTGGTTTAATGGTGTGTG
TTCATGGAGGAACCCCATTACCACTGTGCTGGTTCACATCCTATTTATAATGTTGGTGTG
CTTTCCAGAGCTCATACTCCCAACAGTGTTCTTATACATGTTTCTTATAGGGGTTTGGAA
CTATCGTTACCGACCTTGCTATCCTCCACACATGAACACTAAGATCTCTCATGCGGAGGC
TGTCCACCCAGATGAACTTGACGAAGAGTTCGATACATTCCCAACAAGCAGGAGTCCTGA
TGTTATTAGGATGAGGTATGATAGGCTGAGGAGTGTTGCTGGAAGAATACAGACTGTGGT
AGGTGATATAGCAACTCAAGGGGAGAGGGTTCAAGCACTGCTTAGCTGGAGGGATCCTCG
GGCCACAGCAATATTTGTCCTCTTTTGTCTCATAGCAGCAATAGTCCTGTATGTTACACC
ACTCCAAGTTCTTGCAGCATTGGCAGGGTTCTATGTCATGAGGCACCCGAGGTTCAGATA
TAGGTTGCCTTCAACGCCAGTGAATTTCTTCAGACGACTGCCAGCAAGGACCGACAGCAT
GCTATAAAATAGCTGCCATCTGGTGGCCTTATCATTGTGATAAATTGGATGGAGTACTCC
ATGCCGATTACTGTAGTCTGGCTTCGTTTTGTTGTTATTGTAACTGTGTGTTCTTAGTAC
TTGAGAGCCTGTATATCGTATTAGCTTCTGAATGCAGGGAATAATGTGTTTAAGGCTTCT
TGTGAACTATCAGATTTTGGAGTTGTACTGGTCATTTTAAATATCTAGTTGCCCAATATA
TAGTACTTT