Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0682800-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:34860430:34869589:-1 gene:Os04g0682800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Albino midrib 1 description:Potassium efflux antiporter, Chloroplast development, Drought tolerance (Os04t0682800-01);Similar to H0124B04.17 protein. (Os04t0682800-02);Non-protein coding transcript. (Os04t0682800-03);Similar to H0124B04.17 protein. (Os04t0682800-04)
Sequence	ATGGATTTGTCTAGGTTTACTGCCCCGCGGCCGGGCTTGCAGATCGGCGCCGCCGGGAAT GGCTTCCGGGCATGCTCCCTGCGGCGTCTCAGGTATCGTGTCTGCGGCGGGAACCCCATG GGCGCCTCCGCCCTCGGAGGCTGCGGTTCCCGTAGCCTCTTCTACTTGGCTCCAAACCAT GGGAGCCCTCTTGCCCTCCGGACCAGAGGGAGGGCGCTGAGGTGCCAGGGAAATGACTCA CTGGCCTATGTTGATGGCCCTTTGGAAGGTACCAATGGCTCAGTAGTCGATAATACCGAG GACGAAGCAAACAGCTCTGGGTTGGATGAGGAGAAGGGTGATGATGATGCAGAAAATCTC AGGGACTTGCTTCAGAAGGCGAGGAAAGAGCTGGAGGTGGCCAGGTTGAACAGCACCATG TTCGAGGAGAAGGCGCAGCGGATATCCGAGTCGGCCATCGCACTGAAGGATAGGGCAGAT AAAGCTCAGAGCGACGTCTCTTCTGCCGTGACGACCATACAGGAGATCATCAGCAAGGAG GCTGATGCCAAGGAGGCTGTCCGGACAGCTACAATGGCGCTCTCCATGGCTGAGGCCCGC TTGCAGTTGGCGTCAGAAGCTCTGGATGCCAAAAGGGGATCAGTCGGGCCGATGGAAGTT AGCATTGATGATGTGGAGGAGGAGGCCCTTGCGTCCGCGCAAGAGGAGATTAAGGAGTGC CAAGAAAGTCTGTCAAAATGTGAGGAGGAGCTGAGACGTATCCAAGAGAAGAAAATGGAG TTGCAGAAGGAGGTTGATAGATTGACGGAGCTTGCTGAGAGGGCTCTTTTGGATGCTTCA AAAGCTGAGGAGGATGTTGCAAATATAATGGTTTTGGCTGAACAGGCAGTAGCTCTTGAG ATGGAAGCTGCACAGCGAGCAAATGATGCGGAACTAGCATTGCAGAAAGCGGAGAAGGCC ATCTCCTCGGTTGATGCCGTCGTAGAGTTACCAGCACCTGCTGAGGAGCAAGTAAGTGAT GAAGAAGACAATGTTTCTGAAGTGTATGATTACAGCAGTGATGCTATAGATGATATTCCT GAAAGAGACGAGGTGTCAAATGTTGAGCGCCTAACTGTTGGGGACTTAGCTGTAGAAGGC ATTGAGCAACTTGAATCATCCCGTGAAATGTCTGATGACGAAAGCACTGACAAGTTGCTT GTTGAGCCTCAGAAAGAAGCCGAACCTGATATAGATAAGTCAAAGCAAGGGAAAAAACAG GAAATAGAACGAAAGGAGTCTCAGCCATCGAATGCTCCTAAAGCATCACTGAAGAGATCA TCTCGGTTCTTCCCCGCATCTTTCTTCTCCTCCAAAGCGGATGGAGAATTTACACCTACA TCTGTTTTCAAGGGGTTGATGAAATCGACTAGAAAGCATGCGCCAAAGCTTGTTGTTGGG ATAGTGCTTCTTGGAGCAGGAGCATTCTTCTTAAATCGGGCTGAGAAGAGTAGTCAATTA TTTCAGCAGCAAGAAATAACCACAAGTATTGAGGAAGTTACCTCCACTGCAAAGCCCATA GTTCGTGAGATGCGAAAGATCCCACAACGAGTAAAAAAGCTTATTGAGCTCTTACCTCAT CAAGAGGTAAATGAGGAAGAAGCTTCACTCTTCGACATATTATATTTGCTTCTGGCTAGT GTTGTGTTTGTACCATTATTTCAGAAAATACCTGGAGGTAGTCCTGTTCTTGGATATCTG GCTGCTGGTGTCCTAATCGGTCCCTATGGGCTTTCCATCATCCGTCATGTCCATGGAACA AAAGCAATTGCTGAATTTGGAGTTGTTTTCTTGTTGTTCAACATTGGCCTTGAGCTTTCT GTGGAAAGGCTAAGCTCAATGAAGAAGTATGTCTTTGGGTTAGGCTCTGCTCAGGTGCTG GCTACTACAGCAGCTGTTGGTATGATAGCTCACCGTTTTGCAGTGCTACCGGGACCAGCA GCAATTGTTATTGGGAGTGGGTTGGCTCTGTCCTCAACAGCTGTTGTTTTGCAGGTACTA CAAGAACGTGGGGAGAGCACATCACGACATGGACGTGCTACATTTTCTGTGTTATTATTC CAGGATTTGGCTGTGGTGGTCCTGTTGATATTAATACCTCTTATATCACCTAATTCTTCA AAAGGAGGGGTTGGTTTCCAAGCAATAGCAGAAGCTATGGGAATGGCTGCTGTAAAAGCA ATAGCTGCTATAACAGCCATAATCGCTGGAGGTCGTCTGTTGCTTCGTCCAATTTACAAG CAAATTGCTGAAAATAGGAACGCTGAGATATTTTCAGCAAATACTCTCCTTGTTATTTTT GGAACAAGTCTTCTCACAGCTCGGGCTGGATTGTCGATGGCACTGGGAGCATTTTTGGCT GGTCTATTGCTAGCAGAAACAGAATTCTCCTTACAGGTTGAGTCGGATATTGCTCCTTAC CGTGGTCTTCTGTTAGGTCTTTTCTTTATGACGGTTGGAATGTCTATTGACCCCAAGTTG CTTCTGTCAAACTTCCCAGCAATCTCTGTGATATTAGGTCTTTTGATTATTGGAAAGACA ATGTTGGTTACATTTATTGGTAGAGTATTTGGAATTTCCACCATAGCTGCTGTTCGGGTT GGTCTGTTGCTTGCACCTGGTGGGGAGTTTGCTTTTGTTGCCTTCGGAGAAGCTGTCAAT CAGGGTCTTCTATCTCCTCAATTATCGTCATTATTATTTCTAGTGGTTGGCATTTCAATG GCTCTTACACCATGGTTAGCTGCTGGTGGCCAGTTTTTGGCATCAAAATTTGAGCAGCAT GATGTGAGAAGTTTATTACCTGTGGAAAGTGAGACGGATGACTTGCAAGACCATATTATA ATATTGGGATTTGGGCGTGTTGGGCAGATAATCGCACAACTCCTGTCAGAAAGATTAATT CCATTTGTTGCACTTGATGTTCGAAGTGATCGGGTGGCAGTTGGACGCGCGCTTGACCTA CCAGTATATTTCGGGGATGCAGGAAGTAGAGAGGTACTGCACAAAGTTGGGGCTGAGAGG GCCTGCGCAGCTGCTATTACTTTAGATACCCCTGGTGCAAATTATAGAGCTGTCTGGGCT TTGAGCAAATATTTTCCAAATGTGAAGACATTCGTCCGAGCGCATGATGTGGATCATGGT GTTAACTTGGAGAAAGCTGGTGCAACAGCGGTTGTCCCTGAGACCTTGGAACCAAGTCTC CAGTTGGCTGCTGCTGTTCTTGCACAGGCAAAACTCCCAATGTCAGAGATTGCAGCAACT GTCAATGAGTTCAGGAACCGTCATCTGTCAGAGCTCACAGAGTTATGTGCTACAAGTGGA AGTTCTCTGGGCTACGGATACTCGAGAGTCATGTCCATTTCCAAATCAAAGACCGTCACC TCTGATGATGAGAGTGAAACTGTTGATGGAGCATTGGCGATTTGA

Peptide Sequence

PEP ID	Os04t0682800-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:34860430:34869589:-1 gene:Os04g0682800 transcript:Os04t0682800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Albino midrib 1 description:Potassium efflux antiporter, Chloroplast development, Drought tolerance (Os04t0682800-01);Similar to H0124B04.17 protein. (Os04t0682800-02);Non-protein coding transcript. (Os04t0682800-03);Similar to H0124B04.17 protein. (Os04t0682800-04)
Sequence	MDLSRFTAPRPGLQIGAAGNGFRACSLRRLRYRVCGGNPMGASALGGCGSRSLFYLAPNH GSPLALRTRGRALRCQGNDSLAYVDGPLEGTNGSVVDNTEDEANSSGLDEEKGDDDAENL RDLLQKARKELEVARLNSTMFEEKAQRISESAIALKDRADKAQSDVSSAVTTIQEIISKE ADAKEAVRTATMALSMAEARLQLASEALDAKRGSVGPMEVSIDDVEEEALASAQEEIKEC QESLSKCEEELRRIQEKKMELQKEVDRLTELAERALLDASKAEEDVANIMVLAEQAVALE MEAAQRANDAELALQKAEKAISSVDAVVELPAPAEEQVSDEEDNVSEVYDYSSDAIDDIP ERDEVSNVERLTVGDLAVEGIEQLESSREMSDDESTDKLLVEPQKEAEPDIDKSKQGKKQ EIERKESQPSNAPKASLKRSSRFFPASFFSSKADGEFTPTSVFKGLMKSTRKHAPKLVVG IVLLGAGAFFLNRAEKSSQLFQQQEITTSIEEVTSTAKPIVREMRKIPQRVKKLIELLPH QEVNEEEASLFDILYLLLASVVFVPLFQKIPGGSPVLGYLAAGVLIGPYGLSIIRHVHGT KAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLATTAAVGMIAHRFAVLPGPA AIVIGSGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSS KGGVGFQAIAEAMGMAAVKAIAAITAIIAGGRLLLRPIYKQIAENRNAEIFSANTLLVIF GTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKL LLSNFPAISVILGLLIIGKTMLVTFIGRVFGISTIAAVRVGLLLAPGGEFAFVAFGEAVN QGLLSPQLSSLLFLVVGISMALTPWLAAGGQFLASKFEQHDVRSLLPVESETDDLQDHII ILGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRALDLPVYFGDAGSREVLHKVGAER ACAAAITLDTPGANYRAVWALSKYFPNVKTFVRAHDVDHGVNLEKAGATAVVPETLEPSL QLAAAVLAQAKLPMSEIAATVNEFRNRHLSELTELCATSGSSLGYGYSRVMSISKSKTVT SDDESETVDGALAI

Transcript Sequence

Transcript ID	Os04t0682800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:34860430:34869589:-1 gene:Os04g0682800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Albino midrib 1 description:Potassium efflux antiporter, Chloroplast development, Drought tolerance (Os04t0682800-01);Similar to H0124B04.17 protein. (Os04t0682800-02);Non-protein coding transcript. (Os04t0682800-03);Similar to H0124B04.17 protein. (Os04t0682800-04)
Sequence	GCTCTCCTGCCCTGCCTCGTCTCCTCCGCTCAGCTCAGCTCCGGTCCAAACCAAAACACA CACACAACATAAGAGGCGGCGGCCCTAACAAATCCCAAGAGACTTCCACTGCACAACCAA CCTAGAGCAGCTTTGAGACTTGAGAGTGAGAGCTCGCGAGTCGCGCACAGACTCAAACAG AGGCAGAGAGAGATGGGAAGGGAATGAGGCGGCGGCTCCTCTCCCCTTCTCCGGTGACGT GACGACGCCCCTCTCCTCCTCCTCCGCTGCCGCATCCGAGTTCATAAACCTTCGTCCCTT CCGCCCCGCCATCCGTCTTCCCGGAATCCCGGGGGCGCGTGGGGATGGATTTGTCTAGGT TTACTGCCCCGCGGCCGGGCTTGCAGATCGGCGCCGCCGGGAATGGCTTCCGGGCATGCT CCCTGCGGCGTCTCAGGTATCGTGTCTGCGGCGGGAACCCCATGGGCGCCTCCGCCCTCG GAGGCTGCGGTTCCCGTAGCCTCTTCTACTTGGCTCCAAACCATGGGAGCCCTCTTGCCC TCCGGACCAGAGGGAGGGCGCTGAGGTGCCAGGGAAATGACTCACTGGCCTATGTTGATG GCCCTTTGGAAGGTACCAATGGCTCAGTAGTCGATAATACCGAGGACGAAGCAAACAGCT CTGGGTTGGATGAGGAGAAGGGTGATGATGATGCAGAAAATCTCAGGGACTTGCTTCAGA AGGCGAGGAAAGAGCTGGAGGTGGCCAGGTTGAACAGCACCATGTTCGAGGAGAAGGCGC AGCGGATATCCGAGTCGGCCATCGCACTGAAGGATAGGGCAGATAAAGCTCAGAGCGACG TCTCTTCTGCCGTGACGACCATACAGGAGATCATCAGCAAGGAGGCTGATGCCAAGGAGG CTGTCCGGACAGCTACAATGGCGCTCTCCATGGCTGAGGCCCGCTTGCAGTTGGCGTCAG AAGCTCTGGATGCCAAAAGGGGATCAGTCGGGCCGATGGAAGTTAGCATTGATGATGTGG AGGAGGAGGCCCTTGCGTCCGCGCAAGAGGAGATTAAGGAGTGCCAAGAAAGTCTGTCAA AATGTGAGGAGGAGCTGAGACGTATCCAAGAGAAGAAAATGGAGTTGCAGAAGGAGGTTG ATAGATTGACGGAGCTTGCTGAGAGGGCTCTTTTGGATGCTTCAAAAGCTGAGGAGGATG TTGCAAATATAATGGTTTTGGCTGAACAGGCAGTAGCTCTTGAGATGGAAGCTGCACAGC GAGCAAATGATGCGGAACTAGCATTGCAGAAAGCGGAGAAGGCCATCTCCTCGGTTGATG CCGTCGTAGAGTTACCAGCACCTGCTGAGGAGCAAGTAAGTGATGAAGAAGACAATGTTT CTGAAGTGTATGATTACAGCAGTGATGCTATAGATGATATTCCTGAAAGAGACGAGGTGT CAAATGTTGAGCGCCTAACTGTTGGGGACTTAGCTGTAGAAGGCATTGAGCAACTTGAAT CATCCCGTGAAATGTCTGATGACGAAAGCACTGACAAGTTGCTTGTTGAGCCTCAGAAAG AAGCCGAACCTGATATAGATAAGTCAAAGCAAGGGAAAAAACAGGAAATAGAACGAAAGG AGTCTCAGCCATCGAATGCTCCTAAAGCATCACTGAAGAGATCATCTCGGTTCTTCCCCG CATCTTTCTTCTCCTCCAAAGCGGATGGAGAATTTACACCTACATCTGTTTTCAAGGGGT TGATGAAATCGACTAGAAAGCATGCGCCAAAGCTTGTTGTTGGGATAGTGCTTCTTGGAG CAGGAGCATTCTTCTTAAATCGGGCTGAGAAGAGTAGTCAATTATTTCAGCAGCAAGAAA TAACCACAAGTATTGAGGAAGTTACCTCCACTGCAAAGCCCATAGTTCGTGAGATGCGAA AGATCCCACAACGAGTAAAAAAGCTTATTGAGCTCTTACCTCATCAAGAGGTAAATGAGG AAGAAGCTTCACTCTTCGACATATTATATTTGCTTCTGGCTAGTGTTGTGTTTGTACCAT TATTTCAGAAAATACCTGGAGGTAGTCCTGTTCTTGGATATCTGGCTGCTGGTGTCCTAA TCGGTCCCTATGGGCTTTCCATCATCCGTCATGTCCATGGAACAAAAGCAATTGCTGAAT TTGGAGTTGTTTTCTTGTTGTTCAACATTGGCCTTGAGCTTTCTGTGGAAAGGCTAAGCT CAATGAAGAAGTATGTCTTTGGGTTAGGCTCTGCTCAGGTGCTGGCTACTACAGCAGCTG TTGGTATGATAGCTCACCGTTTTGCAGTGCTACCGGGACCAGCAGCAATTGTTATTGGGA GTGGGTTGGCTCTGTCCTCAACAGCTGTTGTTTTGCAGGTACTACAAGAACGTGGGGAGA GCACATCACGACATGGACGTGCTACATTTTCTGTGTTATTATTCCAGGATTTGGCTGTGG TGGTCCTGTTGATATTAATACCTCTTATATCACCTAATTCTTCAAAAGGAGGGGTTGGTT TCCAAGCAATAGCAGAAGCTATGGGAATGGCTGCTGTAAAAGCAATAGCTGCTATAACAG CCATAATCGCTGGAGGTCGTCTGTTGCTTCGTCCAATTTACAAGCAAATTGCTGAAAATA GGAACGCTGAGATATTTTCAGCAAATACTCTCCTTGTTATTTTTGGAACAAGTCTTCTCA CAGCTCGGGCTGGATTGTCGATGGCACTGGGAGCATTTTTGGCTGGTCTATTGCTAGCAG AAACAGAATTCTCCTTACAGGTTGAGTCGGATATTGCTCCTTACCGTGGTCTTCTGTTAG GTCTTTTCTTTATGACGGTTGGAATGTCTATTGACCCCAAGTTGCTTCTGTCAAACTTCC CAGCAATCTCTGTGATATTAGGTCTTTTGATTATTGGAAAGACAATGTTGGTTACATTTA TTGGTAGAGTATTTGGAATTTCCACCATAGCTGCTGTTCGGGTTGGTCTGTTGCTTGCAC CTGGTGGGGAGTTTGCTTTTGTTGCCTTCGGAGAAGCTGTCAATCAGGGTCTTCTATCTC CTCAATTATCGTCATTATTATTTCTAGTGGTTGGCATTTCAATGGCTCTTACACCATGGT TAGCTGCTGGTGGCCAGTTTTTGGCATCAAAATTTGAGCAGCATGATGTGAGAAGTTTAT TACCTGTGGAAAGTGAGACGGATGACTTGCAAGACCATATTATAATATTGGGATTTGGGC GTGTTGGGCAGATAATCGCACAACTCCTGTCAGAAAGATTAATTCCATTTGTTGCACTTG ATGTTCGAAGTGATCGGGTGGCAGTTGGACGCGCGCTTGACCTACCAGTATATTTCGGGG ATGCAGGAAGTAGAGAGGTACTGCACAAAGTTGGGGCTGAGAGGGCCTGCGCAGCTGCTA TTACTTTAGATACCCCTGGTGCAAATTATAGAGCTGTCTGGGCTTTGAGCAAATATTTTC CAAATGTGAAGACATTCGTCCGAGCGCATGATGTGGATCATGGTGTTAACTTGGAGAAAG CTGGTGCAACAGCGGTTGTCCCTGAGACCTTGGAACCAAGTCTCCAGTTGGCTGCTGCTG TTCTTGCACAGGCAAAACTCCCAATGTCAGAGATTGCAGCAACTGTCAATGAGTTCAGGA ACCGTCATCTGTCAGAGCTCACAGAGTTATGTGCTACAAGTGGAAGTTCTCTGGGCTACG GATACTCGAGAGTCATGTCCATTTCCAAATCAAAGACCGTCACCTCTGATGATGAGAGTG AAACTGTTGATGGAGCATTGGCGATTTGAGCTGATGCGTTAGTCACCTCCCTTAGACTGT ACAGTAGATAATCTGTCATCAAAGATAATTTGCGTATAGAAAAGTAGTAGCAAAATAATT CACGCAATGACGATTCCCATTTTTGAAAACTTAGCATTACCCCTTTTTTTAATGTATGGT AGGACATAGGATATTACTTATCTTCTACCATCAGTTCATTTATTTGTAGCCCTTTTACTC CGTTAGCAAGTAATTTCTTGATGGAGAACTAGGACGATGCTTGCACCTTACATGGAGAAC ACTGAGAATTTCACAAGTGGCCTCCAAATGGCGCATGATGGATAAGTCGTAGTCGTCTCT TATGAGGAATCCATACAACCAAGATTTTGGGTTCAGAACTAAATATTATGATTTTGTTAG TACTCAGAGCTGATGTTGGAAACAAGTGGTGTCGGGTTTCTTTTGATATTGCATTATATT TTT