Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0682400-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:34832052:34837342:-1 gene:Os04g0682400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0124B04.13 protein. (Os04t0682400-01)
Sequence	ATGAATCCATTTCCTCATGCTGCTGCTGCTCTCGATCCATCCTCAGTTCTCAACGCACAA TACAAACACACACACACAGAGGGAGAGGGAGACGCAGGGTCACCACCTAATCACCACCAC CACCTCCACCACCTCCTCTCTTCTCGGGATTGTTACTGCTCCACTCACTGCTTGGCCCTT CTCTCACCTTCTTCCAACTTCCCCCTCTCCTTCTACTCCCCTCCAGGATCGAACCCCGCG CGCTGCAACAAGCCTGGCATTTTGAACCTCTTCTTTGTGAACCAGTTGCAGGCACAATTA CGAGGTGGAAAAGTGACTTTGGCTGCTCAGCAGGAGGGTTTCAGTGACAAGATGAATTCT GGTGCTGAATATGAAGATGGCAGTGAGGAAGAAGAACCATATGAACGTGTGTTTTATGAT GATGAAGACGATGGCAATGATGATTCAATATGTGGGGATCCCTGTGATGATTCAGTACCA AAAGAGGAGGTGCACAGGAAGCTTATGCATGAAGCAGAGCCATATGATGATTTGGTGGCT GGTGAGGAGGAATCTGTTGAGAACTCTGCTCTGCAAGCTTTCAAGAAGGAACGAAATGAG CAAGAGCTCAAGCAGGCCCAGAAAATGGGTTACAGCATTAAGCAAAAGGAGATACCAGTG GACATGGAAATGGGAATGAAACCGTTCAAAAAACGGCTTGTCAAGTTTGCTGATGATGTA TCATGTTACACATACAGTACCGAGAGTTTTGCTGCTGCAAAGTTGGAGAAAAGGAAAGCT CAGTTTGATGACCAGGACAAGCACCTCCATAAGAAACAGGAACACACTCCACCTTCGTTT CCTCAGGATGGTGGCAAGCTGAAAGAAGTGGACAACACTAATCTGTATGTGGGCAACCTA CCTGCTTCTGTAGGTTCTCACAAGCTCATCGAGCTATTTCTACCTTTCGGTCAAATTGTC AGATCAAGAGTTGTGGATGATTGTTTCACTGGTTTGAGCCAGGGATATGGCTTTGTGAAG TATTCTGATCCTCGCTGTGCTTCTGAAGCTATTAAGCGCATGAATGGGCGCTTGGTTGAA GGAAGAGCTCTAGAGGTCAGAGTAGCTGGTTTTCCATCATCAGAGGATAATAGCCAGCAG CCTTCAAAGGAAACTGACATGGCTAAATTGTATGTGTGCAACCTTTCCTTGTCCATGAAC ACAGACAGGCTGATTCATCTTTTTCTGCCTTTTGGGGAAGTAACTAATGCAAAGGTGGCC AAAGATCACACAACAGGCTTAAGTAAAGGATATGGCTTTGTGCAGTACTCTAGTCCTCAC CATGCAGCTGAGGCTGTCATCCATTTGAATGGACGTCTTGTCGATGGAAGAAAGATAGAG GTTCGAGTATCTGGCATACCTTCAACACTGCCAAATTCAGCTGTTGAATCACCCAGCACC ACCAGAAATTCAGCTGTTGAATCACCCAGCACCACCAGAACCGTCAAGGAAATTGACATG TCTAATCTGTATGTCTGTAACATGCCATCGTCAATTGACACCAAGAAGTTGGTTGAGCTT TTCCTTCCATTTGGTAAGATCACCCATGCAAGAGTGGTGGCAGATCCTGACACCTTTTCA GCCAAAGGATATGGTTTCATCAAGTTTACTGATTCTGAATCTGCTACCAAAGCTATTGCA GCAATGAATGGAGCATTGGTTGGAGGAGAAATGATAATTGTCAGAGTTGCAGGCCTTTCC CCATCAGCATCCATCTCAGCTGTACAGACCACTCAAGACATCAACAAGTCTAGACTATAC ATCACTAATCTTCCACGGTCGATGACTGCCGATAAGATGGTTAATCTTTTCGCGCCCTTT GGTCAGATCACTAAAGTCCTGATGAATCTGGAGTATAGTCTAGTGTGGTATGCAGATGCA CCCTCAGCTACCAAAGCTGTCCAACACATGGATGGATACATGGTTGAAGGAAAGAGGTTA GTGGTCAAGAGATCAGAGTTATGTACAACCAACGCTTCACAAGCAGGTGGCAAGCCAATC AAGGAAATCGACATGGCCAATCTCTATGTTGGCAGGGTTCCATCAAGTTTAACTGAAGAT CAATTCATCGATCTCTTCCGCCCATTTGGACGAGTTGTTCAAGCTAGAATGTTTCGATTT CAGAGGTATGGCATGGTTAGGTTTGATAATCCTTCATGTGCTGCTGCAGCAATTGATCAT TTGGATGGCTACCAGATTGGTGGAAGCATACTGGCTGTGAGAGTCGCGGGGCTTCCAGCA GAATCCAATGCAGCCAAGGGTGCTCTGACATCACAGATGTCTTCTAATGAGCAGGGACAA ATCGACATGACTAACCTTTATGTGAGCCATCTCCCGAGCTATGTTAACAACGAAAGACTT ATCGACCTCTTCCTACCATGTGGCCAAATCACTCAAGCAAAAGTAGTTGTTGAGAGATAC ACTGGTGTGAGCAAAGGATTTGGATTTGTCAAGTTTGCTGATGCTTACTCTGCTGCTGTG GCTCTCACTCACATGAATGGTTACCCTCTGGATGGGCATGTGTTGGAGGTTAGGATAGCT GGTGTTCATCCAGATGCTATGAGCAGTTACATGGCGCATTTCTACTCCCACTTCACAATG CATGATCCCGCAAAGGCGGCTGTCGGAATACCTACGTCCTATTGGCCGCACTATTACGAT GAATCCGCATACAATACAACAGCTGAGAACCTGGGCCAAGTCACCACTACATCTGCAACC GATGCTTCTGCTGCTCAAACATCTCAGAAGGAAAGGTTGCCTGGATCTAAATCAGTCGAT TTGGTTGCTGAGAAAGATTGCTCTTCTGCGTCGAACAAAGTTGCCAATTGTTCTGAGTCA CAGCCAACAGCTTGGGCTGGTCCACCTGGCTTTGAGCCTCATGCCATCTCCAAGAAATGT ACTGCTGGGTCCAATGCTTCTCAAGCTTGTTCAAAGGATCATTTTGCACAGTCAGGAGGT GGCCACAAAAGGCGTTCAATCGTCTAG

Peptide Sequence

PEP ID	Os04t0682400-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:34832052:34837342:-1 gene:Os04g0682400 transcript:Os04t0682400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0124B04.13 protein. (Os04t0682400-01)
Sequence	MNPFPHAAAALDPSSVLNAQYKHTHTEGEGDAGSPPNHHHHLHHLLSSRDCYCSTHCLAL LSPSSNFPLSFYSPPGSNPARCNKPGILNLFFVNQLQAQLRGGKVTLAAQQEGFSDKMNS GAEYEDGSEEEEPYERVFYDDEDDGNDDSICGDPCDDSVPKEEVHRKLMHEAEPYDDLVA GEEESVENSALQAFKKERNEQELKQAQKMGYSIKQKEIPVDMEMGMKPFKKRLVKFADDV SCYTYSTESFAAAKLEKRKAQFDDQDKHLHKKQEHTPPSFPQDGGKLKEVDNTNLYVGNL PASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAIKRMNGRLVE GRALEVRVAGFPSSEDNSQQPSKETDMAKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVA KDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVSGIPSTLPNSAVESPST TRNSAVESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFS AKGYGFIKFTDSESATKAIAAMNGALVGGEMIIVRVAGLSPSASISAVQTTQDINKSRLY ITNLPRSMTADKMVNLFAPFGQITKVLMNLEYSLVWYADAPSATKAVQHMDGYMVEGKRL VVKRSELCTTNASQAGGKPIKEIDMANLYVGRVPSSLTEDQFIDLFRPFGRVVQARMFRF QRYGMVRFDNPSCAAAAIDHLDGYQIGGSILAVRVAGLPAESNAAKGALTSQMSSNEQGQ IDMTNLYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAV ALTHMNGYPLDGHVLEVRIAGVHPDAMSSYMAHFYSHFTMHDPAKAAVGIPTSYWPHYYD ESAYNTTAENLGQVTTTSATDASAAQTSQKERLPGSKSVDLVAEKDCSSASNKVANCSES QPTAWAGPPGFEPHAISKKCTAGSNASQACSKDHFAQSGGGHKRRSIV

Transcript Sequence

Transcript ID	Os04t0682400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:34832052:34837342:-1 gene:Os04g0682400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0124B04.13 protein. (Os04t0682400-01)
Sequence	TGCGAAAGAAAATGAATCCATTTCCTCATGCTGCTGCTGCTCTCGATCCATCCTCAGTTC TCAACGCACAATACAAACACACACACACAGAGGGAGAGGGAGACGCAGGGTCACCACCTA ATCACCACCACCACCTCCACCACCTCCTCTCTTCTCGGGATTGTTACTGCTCCACTCACT GCTTGGCCCTTCTCTCACCTTCTTCCAACTTCCCCCTCTCCTTCTACTCCCCTCCAGGAT CGAACCCCGCGCGCTGCAACAAGCCTGGCATTTTGAACCTCTTCTTTGTGAACCAGTTGC AGGCACAATTACGAGGTGGAAAAGTGACTTTGGCTGCTCAGCAGGAGGGTTTCAGTGACA AGATGAATTCTGGTGCTGAATATGAAGATGGCAGTGAGGAAGAAGAACCATATGAACGTG TGTTTTATGATGATGAAGACGATGGCAATGATGATTCAATATGTGGGGATCCCTGTGATG ATTCAGTACCAAAAGAGGAGGTGCACAGGAAGCTTATGCATGAAGCAGAGCCATATGATG ATTTGGTGGCTGGTGAGGAGGAATCTGTTGAGAACTCTGCTCTGCAAGCTTTCAAGAAGG AACGAAATGAGCAAGAGCTCAAGCAGGCCCAGAAAATGGGTTACAGCATTAAGCAAAAGG AGATACCAGTGGACATGGAAATGGGAATGAAACCGTTCAAAAAACGGCTTGTCAAGTTTG CTGATGATGTATCATGTTACACATACAGTACCGAGAGTTTTGCTGCTGCAAAGTTGGAGA AAAGGAAAGCTCAGTTTGATGACCAGGACAAGCACCTCCATAAGAAACAGGAACACACTC CACCTTCGTTTCCTCAGGATGGTGGCAAGCTGAAAGAAGTGGACAACACTAATCTGTATG TGGGCAACCTACCTGCTTCTGTAGGTTCTCACAAGCTCATCGAGCTATTTCTACCTTTCG GTCAAATTGTCAGATCAAGAGTTGTGGATGATTGTTTCACTGGTTTGAGCCAGGGATATG GCTTTGTGAAGTATTCTGATCCTCGCTGTGCTTCTGAAGCTATTAAGCGCATGAATGGGC GCTTGGTTGAAGGAAGAGCTCTAGAGGTCAGAGTAGCTGGTTTTCCATCATCAGAGGATA ATAGCCAGCAGCCTTCAAAGGAAACTGACATGGCTAAATTGTATGTGTGCAACCTTTCCT TGTCCATGAACACAGACAGGCTGATTCATCTTTTTCTGCCTTTTGGGGAAGTAACTAATG CAAAGGTGGCCAAAGATCACACAACAGGCTTAAGTAAAGGATATGGCTTTGTGCAGTACT CTAGTCCTCACCATGCAGCTGAGGCTGTCATCCATTTGAATGGACGTCTTGTCGATGGAA GAAAGATAGAGGTTCGAGTATCTGGCATACCTTCAACACTGCCAAATTCAGCTGTTGAAT CACCCAGCACCACCAGAAATTCAGCTGTTGAATCACCCAGCACCACCAGAACCGTCAAGG AAATTGACATGTCTAATCTGTATGTCTGTAACATGCCATCGTCAATTGACACCAAGAAGT TGGTTGAGCTTTTCCTTCCATTTGGTAAGATCACCCATGCAAGAGTGGTGGCAGATCCTG ACACCTTTTCAGCCAAAGGATATGGTTTCATCAAGTTTACTGATTCTGAATCTGCTACCA AAGCTATTGCAGCAATGAATGGAGCATTGGTTGGAGGAGAAATGATAATTGTCAGAGTTG CAGGCCTTTCCCCATCAGCATCCATCTCAGCTGTACAGACCACTCAAGACATCAACAAGT CTAGACTATACATCACTAATCTTCCACGGTCGATGACTGCCGATAAGATGGTTAATCTTT TCGCGCCCTTTGGTCAGATCACTAAAGTCCTGATGAATCTGGAGTATAGTCTAGTGTGGT ATGCAGATGCACCCTCAGCTACCAAAGCTGTCCAACACATGGATGGATACATGGTTGAAG GAAAGAGGTTAGTGGTCAAGAGATCAGAGTTATGTACAACCAACGCTTCACAAGCAGGTG GCAAGCCAATCAAGGAAATCGACATGGCCAATCTCTATGTTGGCAGGGTTCCATCAAGTT TAACTGAAGATCAATTCATCGATCTCTTCCGCCCATTTGGACGAGTTGTTCAAGCTAGAA TGTTTCGATTTCAGAGGTATGGCATGGTTAGGTTTGATAATCCTTCATGTGCTGCTGCAG CAATTGATCATTTGGATGGCTACCAGATTGGTGGAAGCATACTGGCTGTGAGAGTCGCGG GGCTTCCAGCAGAATCCAATGCAGCCAAGGGTGCTCTGACATCACAGATGTCTTCTAATG AGCAGGGACAAATCGACATGACTAACCTTTATGTGAGCCATCTCCCGAGCTATGTTAACA ACGAAAGACTTATCGACCTCTTCCTACCATGTGGCCAAATCACTCAAGCAAAAGTAGTTG TTGAGAGATACACTGGTGTGAGCAAAGGATTTGGATTTGTCAAGTTTGCTGATGCTTACT CTGCTGCTGTGGCTCTCACTCACATGAATGGTTACCCTCTGGATGGGCATGTGTTGGAGG TTAGGATAGCTGGTGTTCATCCAGATGCTATGAGCAGTTACATGGCGCATTTCTACTCCC ACTTCACAATGCATGATCCCGCAAAGGCGGCTGTCGGAATACCTACGTCCTATTGGCCGC ACTATTACGATGAATCCGCATACAATACAACAGCTGAGAACCTGGGCCAAGTCACCACTA CATCTGCAACCGATGCTTCTGCTGCTCAAACATCTCAGAAGGAAAGGTTGCCTGGATCTA AATCAGTCGATTTGGTTGCTGAGAAAGATTGCTCTTCTGCGTCGAACAAAGTTGCCAATT GTTCTGAGTCACAGCCAACAGCTTGGGCTGGTCCACCTGGCTTTGAGCCTCATGCCATCT CCAAGAAATGTACTGCTGGGTCCAATGCTTCTCAAGCTTGTTCAAAGGATCATTTTGCAC AGTCAGGAGGTGGCCACAAAAGGCGTTCAATCGTCTAGCACCATTCACTTCAGGCCACTT GTGGCTTGATCTAACTTGATGGAAGAATCTACCTAAGTTTCCCATCACTTAAGAATTATT AGTCGTCAACGTTTTCTTTTGTAGGGAGATTTCTCTTTAATTGACTGGTTTTCCCATTTG GAGAAAAGACCATGTCCTAACTTTATTGGGTCAGTACAGTACTTCTTAGAGGTCAGGTTA TCTGAGCTAGATGGTAGATGAAAACAATGTCAGTGCAATGTAATGGTAAAAACCTCTATG TGGAACCATTGCATGTTTGTTTATGAATCATGATGCCAACTGATGACCACTCTGATGAGT GAGAGATGCTTGGTTGGAGCTTCATGCTATCTGAACTTGTTAAGGT