Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0682000-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:34816665:34820086:-1 gene:Os04g0682000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUTOPHAGY ASSOCIATED GENE 4 description:Similar to Autophagy 4a. (Os04t0682000-01)
Sequence	ATGACGAGCTTGCCTGATAGGGGTGTATCATCGTCTTCATCTGATCCGTTGTGCGAGGGT AACATTGCACCTTGTTCTTCTAGCTCGGAACAGAAGGAGGATTGTAGCCTGAAACAATCG AAAACCTCGATCCTGTCCTGCGTTTTCAATTCACCTTTCAATATCTTTGAGGCGCACCAG GATTCGTCCGCAAACAAGTCGCCGAAATCGTCCTCTGGATCCTATGATTGGTCGAGGGTA TTGAGGAGGATCGTGTGCTCTGGCTCAATGTGGCGTTTTCTGGGCACCTCCAAGGTTCTC ACTTCAAGTGATGTGTGGTTCCTTGGTAAATGTTACAAGCTTTCGTCGGAGGAGTCGTCT AGTGACTCAGATTCCGAAAGTGGGCATGCCACATTTCTTGAGGACTTCTCGTCAAGGATA TGGATCACTTATCGCAGAGGCTTTGATGCCATCTCTGATTCCAAGTATACTAGTGATGTG AACTGGGGCTGCATGGTCAGAAGCAGCCAGATGCTGGTTGCTCAGGCATTGATTTTCCAC CATCTTGGCAGATCTTGGAGAAGGCCCTTGGAGAAGCCATATAACCCAGAATATATAGGG ATCTTACACATGTTTGGTGATTCTGAAGCTTGTGCTTTCTCAATTCACAATTTACTTCAA GCTGGAAATAGTTATGGTCTGGCTGCTGGATCATGGGTGGGTCCATACGCCATGTGTCGG GCATGGCAAACCCTTGTCCGCACCAATAGGGAGCAACATGAAGTTGTTGATGGGAATGAA AGTTTCCCTATGGCTCTTTATGTGGTATCCGGTGATGAAGATGGTGAAAGAGGTGGAGCT CCAGTTGTTTGTATTGATGTTGCTGCTCAGCTTTGCTGTGATTTCAACAAAGGTCAATCA ACTTGGTCACCGATTCTTTTGCTGGTCCCTCTGGTTCTTGGTCTTGACAAAATTAATCCA AGGTACATTCCTTTACTAAAGGAGACGTTCACATTTCCTCAGAGCTTGGGGATTTTGGGT GGAAAGCCTGGAACATCAACCTACATTGCTGGGGTACAGGATGACAGGGCGCTCTACCTA GATCCCCATGAAGTTCAGATGGCAGTTGATATTGCAGCTGATAACATAGAGGCAGACACT TCTTCATACCACTGCAGCACTGTACGAGATTTGGCCCTAGACCTGATAGATCCGTCATTG GCTATTGGTTTTTACTGCCGTGATAAAGATGACTTCGATGATTTCTGTTCTCGCGCCACT GAGCTAGTAGATAAAGCCAATGGAGCACCACTCTTCACTGTTGTGCAGTCGGTTCAACCG TCAAAACAAATGTACAATCAGGACGATGTGTTGGGCATCTCAGGGGATGGCAACATCAAT GTCGAGGACCTCGATGCCTCAGGTGAAACAGGAGAGGAGGAATGGCAGATTCTTTAG

Peptide Sequence

PEP ID	Os04t0682000-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:34816665:34820086:-1 gene:Os04g0682000 transcript:Os04t0682000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUTOPHAGY ASSOCIATED GENE 4 description:Similar to Autophagy 4a. (Os04t0682000-01)
Sequence	MTSLPDRGVSSSSSDPLCEGNIAPCSSSSEQKEDCSLKQSKTSILSCVFNSPFNIFEAHQ DSSANKSPKSSSGSYDWSRVLRRIVCSGSMWRFLGTSKVLTSSDVWFLGKCYKLSSEESS SDSDSESGHATFLEDFSSRIWITYRRGFDAISDSKYTSDVNWGCMVRSSQMLVAQALIFH HLGRSWRRPLEKPYNPEYIGILHMFGDSEACAFSIHNLLQAGNSYGLAAGSWVGPYAMCR AWQTLVRTNREQHEVVDGNESFPMALYVVSGDEDGERGGAPVVCIDVAAQLCCDFNKGQS TWSPILLLVPLVLGLDKINPRYIPLLKETFTFPQSLGILGGKPGTSTYIAGVQDDRALYL DPHEVQMAVDIAADNIEADTSSYHCSTVRDLALDLIDPSLAIGFYCRDKDDFDDFCSRAT ELVDKANGAPLFTVVQSVQPSKQMYNQDDVLGISGDGNINVEDLDASGETGEEEWQIL

Transcript Sequence

Transcript ID	Os04t0682000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:34816665:34820086:-1 gene:Os04g0682000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUTOPHAGY ASSOCIATED GENE 4 description:Similar to Autophagy 4a. (Os04t0682000-01)
Sequence	CGCGATTCGCCGTCTCCATCTCGTCTCCCGCTTCCTCCCCGCGTCCGCCACGCCACCCCC CACCTCGCCGCCTCGCCGTGGCTGCTCCTCCCCTCCCCTCCCCTCCCCGCCGCCGGTGCT CCGGCCTTCGCTGCCGCCGTGCTTTCTCTATCTATCCTCTTCCCCCACGCGGACGGGGGT GCGGCGATTCGGGCTCTCCGCCGGACACGCGTCGCTTCGGCCTCAACTGAAGAGCCACGC TTCGGTCTCGACTCTCGAACCCCCAAGTTTGTTGCGTTGCAGAAGATTCGTTTGATGCGT GCTGAAGTACAATCGTGAAAGGAAGGAACTGTGCCAACACCACCTGATTGGTACTCCTGT CGTTCTTGGACAGGAGATTGATTTTGCTTCGGTAGGAGACCCAATTGCGGATGGAATATG CACACGTGCGTTGTTAGGTAATGACGAGCTTGCCTGATAGGGGTGTATCATCGTCTTCAT CTGATCCGTTGTGCGAGGGTAACATTGCACCTTGTTCTTCTAGCTCGGAACAGAAGGAGG ATTGTAGCCTGAAACAATCGAAAACCTCGATCCTGTCCTGCGTTTTCAATTCACCTTTCA ATATCTTTGAGGCGCACCAGGATTCGTCCGCAAACAAGTCGCCGAAATCGTCCTCTGGAT CCTATGATTGGTCGAGGGTATTGAGGAGGATCGTGTGCTCTGGCTCAATGTGGCGTTTTC TGGGCACCTCCAAGGTTCTCACTTCAAGTGATGTGTGGTTCCTTGGTAAATGTTACAAGC TTTCGTCGGAGGAGTCGTCTAGTGACTCAGATTCCGAAAGTGGGCATGCCACATTTCTTG AGGACTTCTCGTCAAGGATATGGATCACTTATCGCAGAGGCTTTGATGCCATCTCTGATT CCAAGTATACTAGTGATGTGAACTGGGGCTGCATGGTCAGAAGCAGCCAGATGCTGGTTG CTCAGGCATTGATTTTCCACCATCTTGGCAGATCTTGGAGAAGGCCCTTGGAGAAGCCAT ATAACCCAGAATATATAGGGATCTTACACATGTTTGGTGATTCTGAAGCTTGTGCTTTCT CAATTCACAATTTACTTCAAGCTGGAAATAGTTATGGTCTGGCTGCTGGATCATGGGTGG GTCCATACGCCATGTGTCGGGCATGGCAAACCCTTGTCCGCACCAATAGGGAGCAACATG AAGTTGTTGATGGGAATGAAAGTTTCCCTATGGCTCTTTATGTGGTATCCGGTGATGAAG ATGGTGAAAGAGGTGGAGCTCCAGTTGTTTGTATTGATGTTGCTGCTCAGCTTTGCTGTG ATTTCAACAAAGGTCAATCAACTTGGTCACCGATTCTTTTGCTGGTCCCTCTGGTTCTTG GTCTTGACAAAATTAATCCAAGGTACATTCCTTTACTAAAGGAGACGTTCACATTTCCTC AGAGCTTGGGGATTTTGGGTGGAAAGCCTGGAACATCAACCTACATTGCTGGGGTACAGG ATGACAGGGCGCTCTACCTAGATCCCCATGAAGTTCAGATGGCAGTTGATATTGCAGCTG ATAACATAGAGGCAGACACTTCTTCATACCACTGCAGCACTGTACGAGATTTGGCCCTAG ACCTGATAGATCCGTCATTGGCTATTGGTTTTTACTGCCGTGATAAAGATGACTTCGATG ATTTCTGTTCTCGCGCCACTGAGCTAGTAGATAAAGCCAATGGAGCACCACTCTTCACTG TTGTGCAGTCGGTTCAACCGTCAAAACAAATGTACAATCAGGACGATGTGTTGGGCATCT CAGGGGATGGCAACATCAATGTCGAGGACCTCGATGCCTCAGGTGAAACAGGAGAGGAGG AATGGCAGATTCTTTAGTGAAGGAACAAAACTGACCTCATGAGGTACAGAAAACGTTGCG TCCAACACGTCGGTCGAATGCCCTTGTTTATGTGTGGGTGAATAGAAATGACTCGTTGTG TTGTCTACAGAACAAGCTGGCACTGTCTCGATACCCCAGGGGGTTGGGTCTTGGGAGAAT CAGCTTTAGGTGCTACCGATGTAAAAATGTGATCAGTTCATCGCTCATTCGTTGGAAATC TCCTTGTATCATACATGCTCTTGTGGTTGGCTATAACTCAAAATTTATTATACGTTCTGT T