Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0681400-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:34780497:34785123:-1 gene:Os04g0681400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF580 family protein. (Os04t0681400-01)
Sequence	ATGGGAGGGCCACTCGGCGCCATCATAGGCAGGCACCCGGCGGCGGCGGGCGGCGGCGGG GGGGATGAGCTGGGAGGTGTCGGCGGCGGCGGCGGCGGGGATGGCATCATTCGGCACAAC CGGAGGTGCCGGGATTTGGCCTTCCTCGTGCTCTTCGCGGCCTTCTGGGTCGCCATGATC GTCAACTCCAGCTTCGGATTCAACCAGGGCAACCCACTCAGGCTTACTTATGAACTAGAC TACAAAGGGAACATTTGTGGCAGTAGGCATGGTGACCCGGATTTGCATGAGCTTGATGTT AGATATTGGATGAACCCAAACCAGGTGTACCAAAGTGGGGTCAAGGACAACAAGATTAAC CTTGCTGATGCCAAAGCCATCTGCCTGATGGAGTGCCCCATGCCAGCAGCAGACGGATTA AACTTTGTTTGTGATTATCCAGAAGGGGACATTCGCCTGTCTGTCGATGATTGGATCGAC AGGGACTATGACTATTTTGAGTTTCTCACACCAGATATGAGAAATAGTTCTCTTCAACTG CAGGGTCCATGCTACCCTGTTATATTTCCAAGTGTGAATGTCTACTGGAGCTGCCAATTT ATTGCGCGAGCATCAAATGTCTCTTTGAAGCATTGGCAACAGATGGGTGGTATCAACATC GACGAAAATATTCTCATAGATAAAACAATCCACAAGGCCATCAATTCTAAATCTTCAGTC CTGAAGAGATACGTTGCTGACATTGGGAAGTCATGGCCTGTGTTAATTGTTTGCGGTGGA CTGCTCCCTCTTTTCTTGTCAGTTATCTGGTTGCTTCTGATTCGTTATTTTGTTGTTGCC ACGCCATGGATAACTGTAGTGGTTTTCAATGCTCTAGTAATCTCTGTTACCATGTTTTTT TATATTAAAGCTGGCTGGTTAGGCAATGATCCCTTAACAGTTGTAATTGGCGAAAGTGAT CCATATGTCCACATAACTGGGCGGGAAATAAGCCACCTTCATGCTGCTACAGTGGTGATG ACAGTAGTAATGATTATTGCATTTCTGACCTCCATAGCTATTATCCGTCGTATACTGATA GCAACACCTGTCCTGAAGGTTGCTGCGAAGGTCATTGGTGAAGTTCAGGCACTAATTATT TTCCCAGTTGTGCCATACTTTATCCTCGCTATCTTTTATATGTTCTGGTTTTCTGCCACA CTCCATCTCTTCAGCTCTGGTCAAGTTCTCCGAAATGACTGCAATACAGATTGTTGCTCA TATGATCTGAAGTTGGGCAAAGTAAACTGTGACAACTGCTGTGGGTACAGCATCCATTAC ACCCCTCATATTGGTATTGCCATTCTTTTCCACTTATTTGGCTGTTACTGGGCAACCCAA TTCTTTATTGCTTGCTCTTCAACCGTGATTGCTGGATCAGTTGCTTCATACTATTGGGCA CGTGGTGAAATATCTCATGACATACCATTTGTTACAGTTGTTTCTTCAATGAAGCGGTTG TTGCGTTACAGCCTTGGTTCAGTTGCTATAGGTTCACTTGTTGTATCTGCTGTTGAGTGG GTGCGGTTTATACTAGAATGCCTCAGACGCAAGTTGAAGCTAGTTGATTCCGCTCGCGAA AGCTGCTTTGGGAAAATGACATCATCCTCTTCTCAATGCTGCCTGGGCTGCATAGACTGG ACCCTCAAGTCTGTGAATCGAAATGCCTATATAATGATCGCCATTACCGGGAAAGGGTTC TTCAAAGCTTCTGTTCTTGCAACTGGTTTGATCATGAATAACATACTGCGCATTGGAAAA GTTAACGTCATTGGAGATGTCATCCTCTTTCTGGGGAAGCTCTGTGTGAGCTTGTTCTGT GCGCTCTTTGCGTTCCTTATGTTAGACACACACAAATACAAGTCCGCACATAACAAGATA TCATCTCCTCTTGTTCCTGTAGTGGTATCATGGGCCCTTGGTTTCATAGTTGCCAAGCTT TTCTTCCAGGTCGTCGAGATGTCGATTGACACCATAATCCTCTCATTCTGCCAAGATGCA GAAGAGCACCAAGGGAACGCGCAGTACGCTCCCCCTCTCCTCATGGAGACACTGGATGAA CAGAGTGAACTCCAAAGACTAACTCAAGGACCTTGA

Peptide Sequence

PEP ID	Os04t0681400-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:34780497:34785123:-1 gene:Os04g0681400 transcript:Os04t0681400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF580 family protein. (Os04t0681400-01)
Sequence	MGGPLGAIIGRHPAAAGGGGGDELGGVGGGGGGDGIIRHNRRCRDLAFLVLFAAFWVAMI VNSSFGFNQGNPLRLTYELDYKGNICGSRHGDPDLHELDVRYWMNPNQVYQSGVKDNKIN LADAKAICLMECPMPAADGLNFVCDYPEGDIRLSVDDWIDRDYDYFEFLTPDMRNSSLQL QGPCYPVIFPSVNVYWSCQFIARASNVSLKHWQQMGGINIDENILIDKTIHKAINSKSSV LKRYVADIGKSWPVLIVCGGLLPLFLSVIWLLLIRYFVVATPWITVVVFNALVISVTMFF YIKAGWLGNDPLTVVIGESDPYVHITGREISHLHAATVVMTVVMIIAFLTSIAIIRRILI ATPVLKVAAKVIGEVQALIIFPVVPYFILAIFYMFWFSATLHLFSSGQVLRNDCNTDCCS YDLKLGKVNCDNCCGYSIHYTPHIGIAILFHLFGCYWATQFFIACSSTVIAGSVASYYWA RGEISHDIPFVTVVSSMKRLLRYSLGSVAIGSLVVSAVEWVRFILECLRRKLKLVDSARE SCFGKMTSSSSQCCLGCIDWTLKSVNRNAYIMIAITGKGFFKASVLATGLIMNNILRIGK VNVIGDVILFLGKLCVSLFCALFAFLMLDTHKYKSAHNKISSPLVPVVVSWALGFIVAKL FFQVVEMSIDTIILSFCQDAEEHQGNAQYAPPLLMETLDEQSELQRLTQGP

Transcript Sequence

Transcript ID	Os04t0681400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:34780497:34785123:-1 gene:Os04g0681400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF580 family protein. (Os04t0681400-01)
Sequence	AGCTGCACACACTGACAAGCTCATCACTCCACCAGCCAGCTTGAGCTCGCCCACTTCCGC TCACAAGAAGCACAACCGCGAGCTACCACAGCATCGGATCGAGGGCGAGCGGCGGCGGAG GCGGCGGAATGGGAGGGCCACTCGGCGCCATCATAGGCAGGCACCCGGCGGCGGCGGGCG GCGGCGGGGGGGATGAGCTGGGAGGTGTCGGCGGCGGCGGCGGCGGGGATGGCATCATTC GGCACAACCGGAGGTGCCGGGATTTGGCCTTCCTCGTGCTCTTCGCGGCCTTCTGGGTCG CCATGATCGTCAACTCCAGCTTCGGATTCAACCAGGGCAACCCACTCAGGCTTACTTATG AACTAGACTACAAAGGGAACATTTGTGGCAGTAGGCATGGTGACCCGGATTTGCATGAGC TTGATGTTAGATATTGGATGAACCCAAACCAGGTGTACCAAAGTGGGGTCAAGGACAACA AGATTAACCTTGCTGATGCCAAAGCCATCTGCCTGATGGAGTGCCCCATGCCAGCAGCAG ACGGATTAAACTTTGTTTGTGATTATCCAGAAGGGGACATTCGCCTGTCTGTCGATGATT GGATCGACAGGGACTATGACTATTTTGAGTTTCTCACACCAGATATGAGAAATAGTTCTC TTCAACTGCAGGGTCCATGCTACCCTGTTATATTTCCAAGTGTGAATGTCTACTGGAGCT GCCAATTTATTGCGCGAGCATCAAATGTCTCTTTGAAGCATTGGCAACAGATGGGTGGTA TCAACATCGACGAAAATATTCTCATAGATAAAACAATCCACAAGGCCATCAATTCTAAAT CTTCAGTCCTGAAGAGATACGTTGCTGACATTGGGAAGTCATGGCCTGTGTTAATTGTTT GCGGTGGACTGCTCCCTCTTTTCTTGTCAGTTATCTGGTTGCTTCTGATTCGTTATTTTG TTGTTGCCACGCCATGGATAACTGTAGTGGTTTTCAATGCTCTAGTAATCTCTGTTACCA TGTTTTTTTATATTAAAGCTGGCTGGTTAGGCAATGATCCCTTAACAGTTGTAATTGGCG AAAGTGATCCATATGTCCACATAACTGGGCGGGAAATAAGCCACCTTCATGCTGCTACAG TGGTGATGACAGTAGTAATGATTATTGCATTTCTGACCTCCATAGCTATTATCCGTCGTA TACTGATAGCAACACCTGTCCTGAAGGTTGCTGCGAAGGTCATTGGTGAAGTTCAGGCAC TAATTATTTTCCCAGTTGTGCCATACTTTATCCTCGCTATCTTTTATATGTTCTGGTTTT CTGCCACACTCCATCTCTTCAGCTCTGGTCAAGTTCTCCGAAATGACTGCAATACAGATT GTTGCTCATATGATCTGAAGTTGGGCAAAGTAAACTGTGACAACTGCTGTGGGTACAGCA TCCATTACACCCCTCATATTGGTATTGCCATTCTTTTCCACTTATTTGGCTGTTACTGGG CAACCCAATTCTTTATTGCTTGCTCTTCAACCGTGATTGCTGGATCAGTTGCTTCATACT ATTGGGCACGTGGTGAAATATCTCATGACATACCATTTGTTACAGTTGTTTCTTCAATGA AGCGGTTGTTGCGTTACAGCCTTGGTTCAGTTGCTATAGGTTCACTTGTTGTATCTGCTG TTGAGTGGGTGCGGTTTATACTAGAATGCCTCAGACGCAAGTTGAAGCTAGTTGATTCCG CTCGCGAAAGCTGCTTTGGGAAAATGACATCATCCTCTTCTCAATGCTGCCTGGGCTGCA TAGACTGGACCCTCAAGTCTGTGAATCGAAATGCCTATATAATGATCGCCATTACCGGGA AAGGGTTCTTCAAAGCTTCTGTTCTTGCAACTGGTTTGATCATGAATAACATACTGCGCA TTGGAAAAGTTAACGTCATTGGAGATGTCATCCTCTTTCTGGGGAAGCTCTGTGTGAGCT TGTTCTGTGCGCTCTTTGCGTTCCTTATGTTAGACACACACAAATACAAGTCCGCACATA ACAAGATATCATCTCCTCTTGTTCCTGTAGTGGTATCATGGGCCCTTGGTTTCATAGTTG CCAAGCTTTTCTTCCAGGTCGTCGAGATGTCGATTGACACCATAATCCTCTCATTCTGCC AAGATGCAGAAGAGCACCAAGGGAACGCGCAGTACGCTCCCCCTCTCCTCATGGAGACAC TGGATGAACAGAGTGAACTCCAAAGACTAACTCAAGGACCTTGATCTTTTCTTTATTTTT TTTTCTTCTTGCAAGTAGAATTAAGTCGAAATGAAGAAATCAAGTAGAAGCCTGGTTATT ATGTAATCATGTTCCATGTTGCTGGGTAGTGGGTAATTTCACCATTTTAGTAGTGCACTC TGATGCTGAATGTCTGGTCTCTAGCGTGACCAATACCCTTGGCTTGGTCTAACGTATGTA CTACTTTTACTTAGTTAAGTACAATGTTAGTGAAGAAGGTTATATCTCACCTGAATGTC