Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0678300-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:34649606:34655208:1 gene:Os04g0678300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-112 description:WD40 repeat-like domain containing protein. (Os04t0678300-01)
Sequence	ATGCCGGAGGCTGCGGCGGCGGCGGCGGGCCACATGGATCCGGTTGGCGACGAGGCGGCG GAGAGGAGGGAGATGGAGGAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGATGAGGAG TTCTACGAGTCGCTGGATCGGATCCTGTCGTCGTCGTGCTCGTCCACGTCCGCCTCCGAC GACGACGACCAGCAGCACCGGCGGAGGCGGCGGCACCACCCGCAGCCGCAGCAGCTGTCG TCGTCCGCGACGTTCTCCGCGTACGAGGTCTGGATCTCCGAGCCGACATCCGTCGAGGAG CGCCGCCGCGTGCTGCTGCGTCGGCTCGGCCTCGCCCACGACTCCGAGCCCCTGCCGCAC CCGTCCCCACGCGTATCATCCTCCTCCCCTCGTTCGCCGACCCCTTCCCCCCCGTCCTCG TCGCCGCCTCGGCCGGCTCCCGTGGTGGCCGCCGCGGAGGAGCCCAGATCCAGCGGCCAC GGGAAGCCGCCGCTTGCGAGGAACCCGAGCGGCGGCGCGGAGCAATGCCGGATCCGGAAC CTGGACGACGGTACGGAGTTCGAGGTCGGGGAGGTTCACGATGAGGTGGTCCGGGAGGTC GGCACTGGCCGGCAGCTCACCTTCGAGGAGTTCGAGCTCTGCATTGGCCGCTCCCCGATC GTCCAAGAGCTCATGCGCCGGGCCACCACAGCCGCATCATCCTCCACCTCCGACCACGCC GCCCCAGCATCCAAGCCACGGAGGAAGCCTGGAGGCTGGCTGCGTGGCATCCGGCACCTG GCGGGAAGCGTTGCATACGGGCGCAGCAGCACCGATGAGAGGGACAAGGAGAAGGAGAAG GAGAAGAAGGAGAGGGAAGCGCGGCGCCTGAGCTCCGCCACCGATGACAGCCTTGACGGC AACGGCTCGCGCAATGCAGGGAGGGTCAGGGTGCGGCAGTATGGGAAGGCGTGCAAGGAG CTCACCGGGCTGTTCATGACACAAGAATTGGCTGCCCATTCGGGCTCAATCTGGTGTATC AACTTCAGCTTGGATGGACGATACCTTGCAAGCGCTGGCGAGGACCGTGTCATCCATGTG TGGGAGGTATCAGAGGGAGAAAGAAAGGGAGAATTGCTCGGGGAAGGTACGGTGGCAAGG GAGAACGGTGGTGGCTGCAGCCCGTTTCTTGCAGCTGTTGGGAATGGATCGCCGGAGCTG GCAACATTGTCATTGAGCTGTGCTGACGGGGGTTTTGTGGAGAAGAAGAGGAGGCCAAGG ATGCAAAGCAGCCGGAAGTCTGTTGGCTCTGATCATCTAGTTGTGCCTGAATGTGTGTTT GGGTTCAGAGATAAACCAGTATGCTCTCTATTGGGTCACGCCGCCGATGTTCTTGATCTA TCATGGTCCAAATCTCAGTACTTGCTTTCATCCTCAATGGACAAAACTGTTAAACTATGG GACATTACTACTAGTACCTGTCTGAAAACATTTTCACACACAGACTATGTGACTTGCATC CAGTTCAATCCCGTGGATGATAACTTCTTCATTAGTGGATCACTGGATGAAAAAGTACGC ATTTGGAATGTACATGATCGTAAGATTGAGGATTGGAATGATCTTCATGAGATGGTCACT GCTGCGTGTTACTCCCCTGATGGACAGGTTGCACTGGTGGGATCACACAAGGGAAGCTGT CATTTATTTGATACAACTGAAAAGAAGCTTCAGTACAAAAGTCAGATAGAACTAAGAATC AGGAAGAAGAAGTCTGGCCAGAAGAAGATAACTGGCTTCCAGTTTGCTCCTGGAAGCTCG TCGGAAGTCCTGATTACCTCTGCAGATTCAAGAATCCGTGTTGTTAATGGTGATGAACTC GTTCACAAATTTAAAGGGTTCCGAAATACAAGTAGCCAAATATCCGCTTCTGTAGCTCCA AACGGGAAATATGTGGTCTGTGCCAGTGAGGACTCCCACGTGTATGTCTGGAGGCATGAC AATACTTCCCATCCGAGCAGAAGCAGGAGTGCAGTTGATGTAACCAACTCATATGAGCAT TTCCATTGCCATGATGTCACTGTGGCTATCACATGGCCCGGCGCTGAATCCCGTGGCTCA TTCGGGTCCCGTAGCAGCAGAAACAGTGATTCAGACGATGCAGTGATGAACACGGGTCGG GATGCCCCTGTAGAGAACAGTGAGCATGATCTGAATGGCACTGTCAATAGATGCACCAAG CGCCCAGTTTGTGAAGGTGTTGCAAGCACAAGCAATCCTCCAGCGGATGGAGTATCAACG TCCTGGCCTGACGAGAAACAATCGTCTGCCAAGAGCAGTCCTGGTCACTGCTCATCCGAC CTTTGCATTGGAGCTTTGGATGTTCAGCGCCGGTCAGCTTGGGGATTGGTGATTGTCACT GCAGGAAGGGGTGGTGAAATTAGGGTGTTCCAGAATTTCGGCTTCCCGGTTCAAGTGTAA

Peptide Sequence

PEP ID	Os04t0678300-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:34649606:34655208:1 gene:Os04g0678300 transcript:Os04t0678300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-112 description:WD40 repeat-like domain containing protein. (Os04t0678300-01)
Sequence	MPEAAAAAAGHMDPVGDEAAERREMEEKEEEEEEEEEDEEFYESLDRILSSSCSSTSASD DDDQQHRRRRRHHPQPQQLSSSATFSAYEVWISEPTSVEERRRVLLRRLGLAHDSEPLPH PSPRVSSSSPRSPTPSPPSSSPPRPAPVVAAAEEPRSSGHGKPPLARNPSGGAEQCRIRN LDDGTEFEVGEVHDEVVREVGTGRQLTFEEFELCIGRSPIVQELMRRATTAASSSTSDHA APASKPRRKPGGWLRGIRHLAGSVAYGRSSTDERDKEKEKEKKEREARRLSSATDDSLDG NGSRNAGRVRVRQYGKACKELTGLFMTQELAAHSGSIWCINFSLDGRYLASAGEDRVIHV WEVSEGERKGELLGEGTVARENGGGCSPFLAAVGNGSPELATLSLSCADGGFVEKKRRPR MQSSRKSVGSDHLVVPECVFGFRDKPVCSLLGHAADVLDLSWSKSQYLLSSSMDKTVKLW DITTSTCLKTFSHTDYVTCIQFNPVDDNFFISGSLDEKVRIWNVHDRKIEDWNDLHEMVT AACYSPDGQVALVGSHKGSCHLFDTTEKKLQYKSQIELRIRKKKSGQKKITGFQFAPGSS SEVLITSADSRIRVVNGDELVHKFKGFRNTSSQISASVAPNGKYVVCASEDSHVYVWRHD NTSHPSRSRSAVDVTNSYEHFHCHDVTVAITWPGAESRGSFGSRSSRNSDSDDAVMNTGR DAPVENSEHDLNGTVNRCTKRPVCEGVASTSNPPADGVSTSWPDEKQSSAKSSPGHCSSD LCIGALDVQRRSAWGLVIVTAGRGGEIRVFQNFGFPVQV

Transcript Sequence

Transcript ID	Os04t0678300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:34649606:34655208:1 gene:Os04g0678300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-112 description:WD40 repeat-like domain containing protein. (Os04t0678300-01)
Sequence	AAAGTCGAGGGAGATGAGAGAGGAGACTTGTTGATCCAAATGGCGCCCTCGTTGTTGTCT TCCCAACTCCAACTGCACGCCGACGACGTCGCACCCCGCACGAACTAGACAAACACCCAC ACCATAATCCAAAACCAAAACCTCCTCGCCACATATAAATCCCCATTTGCGCGCGGCCGC CTCGCCGGAGGGGAGGGTGTCGCAATGCCGGAGGCTGCGGCGGCGGCGGCGGGCCACATG GATCCGGTTGGCGACGAGGCGGCGGAGAGGAGGGAGATGGAGGAGAAGGAGGAGGAGGAG GAGGAGGAGGAGGAGGATGAGGAGTTCTACGAGTCGCTGGATCGGATCCTGTCGTCGTCG TGCTCGTCCACGTCCGCCTCCGACGACGACGACCAGCAGCACCGGCGGAGGCGGCGGCAC CACCCGCAGCCGCAGCAGCTGTCGTCGTCCGCGACGTTCTCCGCGTACGAGGTCTGGATC TCCGAGCCGACATCCGTCGAGGAGCGCCGCCGCGTGCTGCTGCGTCGGCTCGGCCTCGCC CACGACTCCGAGCCCCTGCCGCACCCGTCCCCACGCGTATCATCCTCCTCCCCTCGTTCG CCGACCCCTTCCCCCCCGTCCTCGTCGCCGCCTCGGCCGGCTCCCGTGGTGGCCGCCGCG GAGGAGCCCAGATCCAGCGGCCACGGGAAGCCGCCGCTTGCGAGGAACCCGAGCGGCGGC GCGGAGCAATGCCGGATCCGGAACCTGGACGACGGTACGGAGTTCGAGGTCGGGGAGGTT CACGATGAGGTGGTCCGGGAGGTCGGCACTGGCCGGCAGCTCACCTTCGAGGAGTTCGAG CTCTGCATTGGCCGCTCCCCGATCGTCCAAGAGCTCATGCGCCGGGCCACCACAGCCGCA TCATCCTCCACCTCCGACCACGCCGCCCCAGCATCCAAGCCACGGAGGAAGCCTGGAGGC TGGCTGCGTGGCATCCGGCACCTGGCGGGAAGCGTTGCATACGGGCGCAGCAGCACCGAT GAGAGGGACAAGGAGAAGGAGAAGGAGAAGAAGGAGAGGGAAGCGCGGCGCCTGAGCTCC GCCACCGATGACAGCCTTGACGGCAACGGCTCGCGCAATGCAGGGAGGGTCAGGGTGCGG CAGTATGGGAAGGCGTGCAAGGAGCTCACCGGGCTGTTCATGACACAAGAATTGGCTGCC CATTCGGGCTCAATCTGGTGTATCAACTTCAGCTTGGATGGACGATACCTTGCAAGCGCT GGCGAGGACCGTGTCATCCATGTGTGGGAGGTATCAGAGGGAGAAAGAAAGGGAGAATTG CTCGGGGAAGGTACGGTGGCAAGGGAGAACGGTGGTGGCTGCAGCCCGTTTCTTGCAGCT GTTGGGAATGGATCGCCGGAGCTGGCAACATTGTCATTGAGCTGTGCTGACGGGGGTTTT GTGGAGAAGAAGAGGAGGCCAAGGATGCAAAGCAGCCGGAAGTCTGTTGGCTCTGATCAT CTAGTTGTGCCTGAATGTGTGTTTGGGTTCAGAGATAAACCAGTATGCTCTCTATTGGGT CACGCCGCCGATGTTCTTGATCTATCATGGTCCAAATCTCAGTACTTGCTTTCATCCTCA ATGGACAAAACTGTTAAACTATGGGACATTACTACTAGTACCTGTCTGAAAACATTTTCA CACACAGACTATGTGACTTGCATCCAGTTCAATCCCGTGGATGATAACTTCTTCATTAGT GGATCACTGGATGAAAAAGTACGCATTTGGAATGTACATGATCGTAAGATTGAGGATTGG AATGATCTTCATGAGATGGTCACTGCTGCGTGTTACTCCCCTGATGGACAGGTTGCACTG GTGGGATCACACAAGGGAAGCTGTCATTTATTTGATACAACTGAAAAGAAGCTTCAGTAC AAAAGTCAGATAGAACTAAGAATCAGGAAGAAGAAGTCTGGCCAGAAGAAGATAACTGGC TTCCAGTTTGCTCCTGGAAGCTCGTCGGAAGTCCTGATTACCTCTGCAGATTCAAGAATC CGTGTTGTTAATGGTGATGAACTCGTTCACAAATTTAAAGGGTTCCGAAATACAAGTAGC CAAATATCCGCTTCTGTAGCTCCAAACGGGAAATATGTGGTCTGTGCCAGTGAGGACTCC CACGTGTATGTCTGGAGGCATGACAATACTTCCCATCCGAGCAGAAGCAGGAGTGCAGTT GATGTAACCAACTCATATGAGCATTTCCATTGCCATGATGTCACTGTGGCTATCACATGG CCCGGCGCTGAATCCCGTGGCTCATTCGGGTCCCGTAGCAGCAGAAACAGTGATTCAGAC GATGCAGTGATGAACACGGGTCGGGATGCCCCTGTAGAGAACAGTGAGCATGATCTGAAT GGCACTGTCAATAGATGCACCAAGCGCCCAGTTTGTGAAGGTGTTGCAAGCACAAGCAAT CCTCCAGCGGATGGAGTATCAACGTCCTGGCCTGACGAGAAACAATCGTCTGCCAAGAGC AGTCCTGGTCACTGCTCATCCGACCTTTGCATTGGAGCTTTGGATGTTCAGCGCCGGTCA GCTTGGGGATTGGTGATTGTCACTGCAGGAAGGGGTGGTGAAATTAGGGTGTTCCAGAAT TTCGGCTTCCCGGTTCAAGTGTAAAGCTAGTGTGAGAATATTCAGAGATGTCCGTTTGTT TACTGTATAGATATCGTTAGTTTTTTCTCCATTTCACCTAGTTCTTTTACTAGCTAAAAG ATTTCCCTGTTTCGCTGTCAGGTTGGGAGCCCCAGTAGCTCAATCCAACTTGCTAAGCAC CACACTATTTTTTACCCTCTGTTGATACAAGGCTTTGTGTAATTGTATGGTTAACAACCA ATACATCGATTTGTTTGTTCATATATTGTTTCTTGGTTATACACTGATTGATATATGAAG ATAATTTCTAACTC