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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0678200-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:34642807:34644512:1 gene:Os04g0678200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1218 family protein. (Os04t0678200-01)
Sequence

ATGGCGTCCATAATCCTCGTGGTGGTCGTGTTCGTCCTCGACGCCCTCGCCTTCGTCCTC
GCCATCGGCGCCGAGAAGCGCCGGAGCACGGCCACCTTTAGCGAGGACACGAGCGGCAGG
CAGTACTGCGTGTACAGCTCCGACGCGGCGACGGGGTACGGCATCGGGGCGCTGCTGCTG
CTGCTCGCCGGGCAGGCCGTCGTCATGGTGGTCACCCGCTGCTTCTGCTGCGGCCGCGCG
CTGTCCCCCGGCCGGTGGCGCGCCTTCTCCGGATTCTGCTTCATCGTCTGCTGGTTCACG
TTCGTGATCGCGGAGCTGTGCCTGCTGGCGGGGTCGGTGCGGAACGCGTACCACACCAAG
TACAGCACGCTGGTGATTAGCGGGCCACCGCGCTGCGCGATGCTGCGCAAGGGCGTGTTC
GCCGCCGGCGCCGCCTTCACCTTCCTCACCGCGCTCTTCGCCGAGCTCCACTACCTCTTC
TTCGCCAAGGCCCGCCACGCCGCCGCCGTGCCCCCGCCCATTGTCGGCGGCATCGGCATG
ACCCGCATGTAG

Peptide Sequence

PEP ID

Os04t0678200-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:34642807:34644512:1 gene:Os04g0678200 transcript:Os04t0678200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1218 family protein. (Os04t0678200-01)
Sequence

MASIILVVVVFVLDALAFVLAIGAEKRRSTATFSEDTSGRQYCVYSSDAATGYGIGALLL
LLAGQAVVMVVTRCFCCGRALSPGRWRAFSGFCFIVCWFTFVIAELCLLAGSVRNAYHTK
YSTLVISGPPRCAMLRKGVFAAGAAFTFLTALFAELHYLFFAKARHAAAVPPPIVGGIGM
TRM

Transcript Sequence

Transcript ID

Os04t0678200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:34642807:34644512:1 gene:Os04g0678200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1218 family protein. (Os04t0678200-01)
Sequence

ATCTCCCTCGACTTGCTGCTAAGCTTTCCTCTCGTCTTTGACGCCCCCATCTTTCCCTAG
CTCGCTTGTCCTAATCCTCCTCTCTTTCTGCAACAAGAGGAAAGTGAGAGCTCCTCTTGG
CTCGCTCGCTGCACGAATCAGTAGTCCAAGTTGGATTAATTAAGGGAGGTACGTAAATTA
GTTCGAATCCATCCATGGCGTCCATAATCCTCGTGGTGGTCGTGTTCGTCCTCGACGCCC
TCGCCTTCGTCCTCGCCATCGGCGCCGAGAAGCGCCGGAGCACGGCCACCTTTAGCGAGG
ACACGAGCGGCAGGCAGTACTGCGTGTACAGCTCCGACGCGGCGACGGGGTACGGCATCG
GGGCGCTGCTGCTGCTGCTCGCCGGGCAGGCCGTCGTCATGGTGGTCACCCGCTGCTTCT
GCTGCGGCCGCGCGCTGTCCCCCGGCCGGTGGCGCGCCTTCTCCGGATTCTGCTTCATCG
TCTGCTGGTTCACGTTCGTGATCGCGGAGCTGTGCCTGCTGGCGGGGTCGGTGCGGAACG
CGTACCACACCAAGTACAGCACGCTGGTGATTAGCGGGCCACCGCGCTGCGCGATGCTGC
GCAAGGGCGTGTTCGCCGCCGGCGCCGCCTTCACCTTCCTCACCGCGCTCTTCGCCGAGC
TCCACTACCTCTTCTTCGCCAAGGCCCGCCACGCCGCCGCCGTGCCCCCGCCCATTGTCG
GCGGCATCGGCATGACCCGCATGTAGACAGAGTGACAGACAGCACCTTGGTTCTCAATCC
ATTTGCCATTTGCATCCCCCCTGACTTCGACGCCCGCGTTGATACCTCGATTGCTCTACT
CTGTACATTTCATTCTCATTGCTCAGTATCTGTAGTATATGGAGTATATCTGTAACTGCG
TGGCTCATGTCTCTGTATTTTGGTATTCTAGTTGAGTGCGTTCATGGTCATTAATTGATC
GGCCACCTGACCTGAAGTTTCTGTGTGAGATCGGCCACATTGACATGAAGTTTTTCTGTG
TAATTTGGGGATCG