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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0676100-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:34513602:34515261:1 gene:Os04g0676100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Thioredoxin x description:Similar to Thioredoxin X, chloroplast precursor. (Os04t0676100-01)
Sequence

ATGGCGTCCGCACCGAGCACCACCGCGTCCGGCCTCGCGCCGCCGCCGTTCTCCTCGGCG
CGCGGCGCGCGCCTCCTCCCCGGCGCGCTGCTGCGCCTCCCGCCGCCTCCGGCCTCGGTG
GGTAGCTTCCGCGTGGTGGGGCCCGCCGCCGCCCCACCCGGCGGCCGCCGCATCGCCAGC
GCGCGCGTGCGGTGTGGCGCGGCGGTGAGGTTCATCGGGCAGAGCGAGTTCGAGGCGGAG
GTGTTGCAGTCGGACCTGCCCGTGCTCGTCGACTTCGTCGCCGACTGGTGCGGGCCGTGC
CGCCTCATCGCGCCCGTCGTCGACTGGGCCGCCGAGGAATATGAAGGGAGATTAAAGATT
GTCAAGATTGATCATGATGCCAATCCTCAACTGATTGAAGAGTATAAGGTTTATGGTCTC
CCATCTCTTATTCTATTCAAGGATGGGAAAGAGGTACCAGGGAGCAGAAGAGAAGGCGCA
ATTACAAAAGCCAAGTTCAAGGAATACCTCGAACCTCTCTTGTCAACCTCAACAGTTGCT
TAA

Peptide Sequence

PEP ID

Os04t0676100-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:34513602:34515261:1 gene:Os04g0676100 transcript:Os04t0676100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Thioredoxin x description:Similar to Thioredoxin X, chloroplast precursor. (Os04t0676100-01)
Sequence

MASAPSTTASGLAPPPFSSARGARLLPGALLRLPPPPASVGSFRVVGPAAAPPGGRRIAS
ARVRCGAAVRFIGQSEFEAEVLQSDLPVLVDFVADWCGPCRLIAPVVDWAAEEYEGRLKI
VKIDHDANPQLIEEYKVYGLPSLILFKDGKEVPGSRREGAITKAKFKEYLEPLLSTSTVA

Transcript Sequence

Transcript ID

Os04t0676100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:34513602:34515261:1 gene:Os04g0676100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Thioredoxin x description:Similar to Thioredoxin X, chloroplast precursor. (Os04t0676100-01)
Sequence

GAAGATTCCTCATCCCCCTTCCCTTCTCTTCCCTCTCATGGCGTCCGCACCGAGCACCAC
CGCGTCCGGCCTCGCGCCGCCGCCGTTCTCCTCGGCGCGCGGCGCGCGCCTCCTCCCCGG
CGCGCTGCTGCGCCTCCCGCCGCCTCCGGCCTCGGTGGGTAGCTTCCGCGTGGTGGGGCC
CGCCGCCGCCCCACCCGGCGGCCGCCGCATCGCCAGCGCGCGCGTGCGGTGTGGCGCGGC
GGTGAGGTTCATCGGGCAGAGCGAGTTCGAGGCGGAGGTGTTGCAGTCGGACCTGCCCGT
GCTCGTCGACTTCGTCGCCGACTGGTGCGGGCCGTGCCGCCTCATCGCGCCCGTCGTCGA
CTGGGCCGCCGAGGAATATGAAGGGAGATTAAAGATTGTCAAGATTGATCATGATGCCAA
TCCTCAACTGATTGAAGAGTATAAGGTTTATGGTCTCCCATCTCTTATTCTATTCAAGGA
TGGGAAAGAGGTACCAGGGAGCAGAAGAGAAGGCGCAATTACAAAAGCCAAGTTCAAGGA
ATACCTCGAACCTCTCTTGTCAACCTCAACAGTTGCTTAATATCATCATCTGCAGTATGC
ATCACTGAATCTGATGTCTGGAGGGTGCCAATGCACAACACGACCTGCATGTTGAAGTTT
TTTCCCCCCTCCATGAACTCCCCATTCTAATTTGTAATTACCTCAAGATCATGGTTGCAT
ATATTTTTCATTATTGATGGTAAAAATTAGTATGTACGAAGGGCTATCTGAGGTGCAGTT
TGACCTGGCAC