Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0675000-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:34457427:34463729:-1 gene:Os04g0675000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0103C06.5 protein. (Os04t0675000-01);Hypothetical gene. (Os04t0675000-02);Non-protein coding transcript. (Os04t0675000-03)
Sequence	ATGCTGCGGCAACCTGCAAGCACCTCTGGAGATGTTGATAGAATTGCAAACAGGAAGCAT CGTCACATAGTGCCTAGGCGTTCAACAGAAAAGAAGAACCCTCATAACATCCAGTTTGAA CGTCAAGTAGCTGCGCTTGAATACAGGCAGGAAGAACAGAGGAAGAGAGCCAATGGTGGT CGTTTATTCTTCACATTGTCTTTATCATCCCATCTCGTGGAAAATGGAGATGAACTTGAG ACATCCGCATCACCATCATTGTTACTTTTTCACTTCAATGATCCAGAGGATTTGGCAAGA TGTTTAACTTCATCAAGGGCGTTGCTAGAGGACTCCCAACAATCAGACAAAGCCCCTGAT AATGATTTCTCAGTCAACACCTTCAGCAACGCGAGTGTGGACGTGAAGCGAACTTCACGA AAGAAAAGCAAAAAGAAAAACAAGAGGCACAAAAGAGTGCATGGCAAAAAAGTATCTGAG GCATCTGACACACAGTCTATGCAGAGCAAGGGTGCTTCTCATTGCATCGATGTTGCTGGT GGTGAATCCTTGACACTTTCATCCAACCATGTGGCTCATGCTGGATCTGAAATGCGGTGT AGAAAGGAGACTTTTCCTTCTATGGCTGATGGAGGTGAAACTTTGACACTGCCTCCAAAC CATGTGGCTGACAAATTGTTTGGGGATTTGTCTTCTGATTCTTCAGTGAGAGAAGTTTCT GCGGAGAGACCTGATAGTGAAACTGGTAACGATGGTTCTTTCATAACTCTGATATCAAGT ACATCTTGTAGTGATGAGATAGAATTGTCTAGGCATGCTTCTTATTTTGAATGCTGTGAG CAATCTAACAGCAATAACTCCAGATGTTTGGACAGTGCCTCCACTTCCACTCTTACTGAT TCCTCTTTGGATGGCCATTACACAGATAGCAGTTGGAACTTCAGTGATGATACCGAGAAC TTGTTGATTGACAAAAATGAGTGCCCTCCGTGTGTTCAGTCAAAAGTGACAGATCTCAGG GGTTCTAAATGTGGTGGCAGTGAAGGTTGGCTAAACAAAGCAAATCATGATAAATTCTCC TGTTTCAGAAACAGTGCTGATGCTAGCAGTGGTACACAAGAAATGCAATCATGCAGTAAT GCTAGTAGCGATGGTGATTTCCTCCCAGTAATTTCTAGAAAAAGAGCCCGGAAAAATAGA AAGGTCCAACCTTTGGGGGGTTGTAATGTGGAACATATTTGTGGTGTTGAGCATGGTCAA AGTGGAAAACAATCCAAAATTTCTTCTAGACCAAGTAATTCTTGCACACAAGTTGCATCA AAAGATTCCACTAAGGATTTCATTCACCCAATTAAAGTTCGCACATGGACTCCACATGAA GTTACACTAAATGATTACATGATAGGAGCAAATATGAATCACCTCCAGGATCCAAAACAA AACCGTAGGGGGAAACCACATAAGTACTCTTGTTTGAGTGAAGTGGCAAACTGTGGTTTT ATTGAAGAGAAGAGTGCCTGTACAGCGAAAATGCTTCCTGGAATTACACACTCAACAGAA ACAGGTGTTGGTCAGATAGCATCGAGTTCAGCTTCTGATGTGACGGTCCGAGAGATATCT GAGGAAATTTGTACACCAATAGGTCCTGTGCAGAAAGGAGGGCTGCAGATTTTGCTTCGA GAAGAAAATGTTGTTGGCACAGGTTCTCTTGATGTTTTGAATCATGTTTCTTCTGTTGAT TCCGAAGAACAGAAGAAAGTAGATAATGCTGTAATGAGCAGATCTCATGGCATGGAAGGT CACCATCTACAATCCCAAGATTCAGGTTCTCAGTTCCCTGGATGCACCACAGATTACTGG AAAACTTCCAGGCCTACTGAAAGTGGTTTGGAGGTTGGCTATCATGGTGTATCAGCTTTT GAAGGGCGCTGTAACACGAACCAGCAAAGATCTGTTAGTTCTAAATTGCAATTAGGTGAG ATGATCAAGGCTGCAAATGATGCCTGCAAAGTGCAAGGTGCATCAGATGTTCATCTGATT TCTGGTCACCCCCTTGCTGATTTTGAGACTTTTATATATTCTGCAAGTCCAGTCATTGCT AAGACATCTTGCATGAGGAATGGCAACTGTTTGCAGGACCCGCAAGCTGGCAGCTCACCA TATCAATATCAGATATCGGATGTCTCCTTGAGAAATGTGTGGGAATGGTATGAGGAACCT GGATCCTATGGATTGGAAGTAGAAATCCATAGAAGTCTCAACTCTACGAGATCAGCTTGT GGTGTCTCAGAGTTCTGTGCTTACTTTTTACCTTCTCTATCTGCTATTCAATTGTTTGAA CAGTGCAAGAATAACTTGGACCATAAGTTTGACAGTGATGATGATTTCTTATTATCCCAA CCAAATGGTGTGTATTTACCAAAACCATCTTTATCTGTACAAGACCATGGGGAACCCCTG TTTGAATATTTTGAATCAGAGCATCCTTCTTCACGTCCTCCACTTTTTGAGAAGATCAAA CAGCTTACCAGTGGTGAAAATCTCTCTACTTGCCAAATATTTGGGGATCCCAAGATGTTG GAAAATCTTAAATTGCGCGATCTTCATCCTGCTTCCTGGTTTTGTGTTGCGTGGTATCCT ATTTGCCGAATTCCTCAAGGAAACTGCCGTGCTGCATTCCTGACTTACCACTCCCTGGGC AAAGTAGTTCCCCAAATTCACTCTCCAGACAAGGCTGATGAACCTACTCATTTGGTTTGT CCAGTTGTTGGTTTCTGGAGTTACAATGACAAGGGAGAGCAATGGTTTCAACTGAGAAAC CCAGAGATCAAGCCAATGTCATTAGACGTTGGCCCCAAAACTGATCGTGCTGAAGTCCTG AAACAGAGGCTGAAGACTTTAAGACATGGTGCATCAGTTATGTCAAGCATGGTGATACCC AAGGCCAACGGGGAGAAGTCTATCAACCGTCATCCAGACTATGAATTCTTCCTATCTCGG TCTAACTGA

Peptide Sequence

PEP ID	Os04t0675000-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:34457427:34463729:-1 gene:Os04g0675000 transcript:Os04t0675000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0103C06.5 protein. (Os04t0675000-01);Hypothetical gene. (Os04t0675000-02);Non-protein coding transcript. (Os04t0675000-03)
Sequence	MLRQPASTSGDVDRIANRKHRHIVPRRSTEKKNPHNIQFERQVAALEYRQEEQRKRANGG RLFFTLSLSSHLVENGDELETSASPSLLLFHFNDPEDLARCLTSSRALLEDSQQSDKAPD NDFSVNTFSNASVDVKRTSRKKSKKKNKRHKRVHGKKVSEASDTQSMQSKGASHCIDVAG GESLTLSSNHVAHAGSEMRCRKETFPSMADGGETLTLPPNHVADKLFGDLSSDSSVREVS AERPDSETGNDGSFITLISSTSCSDEIELSRHASYFECCEQSNSNNSRCLDSASTSTLTD SSLDGHYTDSSWNFSDDTENLLIDKNECPPCVQSKVTDLRGSKCGGSEGWLNKANHDKFS CFRNSADASSGTQEMQSCSNASSDGDFLPVISRKRARKNRKVQPLGGCNVEHICGVEHGQ SGKQSKISSRPSNSCTQVASKDSTKDFIHPIKVRTWTPHEVTLNDYMIGANMNHLQDPKQ NRRGKPHKYSCLSEVANCGFIEEKSACTAKMLPGITHSTETGVGQIASSSASDVTVREIS EEICTPIGPVQKGGLQILLREENVVGTGSLDVLNHVSSVDSEEQKKVDNAVMSRSHGMEG HHLQSQDSGSQFPGCTTDYWKTSRPTESGLEVGYHGVSAFEGRCNTNQQRSVSSKLQLGE MIKAANDACKVQGASDVHLISGHPLADFETFIYSASPVIAKTSCMRNGNCLQDPQAGSSP YQYQISDVSLRNVWEWYEEPGSYGLEVEIHRSLNSTRSACGVSEFCAYFLPSLSAIQLFE QCKNNLDHKFDSDDDFLLSQPNGVYLPKPSLSVQDHGEPLFEYFESEHPSSRPPLFEKIK QLTSGENLSTCQIFGDPKMLENLKLRDLHPASWFCVAWYPICRIPQGNCRAAFLTYHSLG KVVPQIHSPDKADEPTHLVCPVVGFWSYNDKGEQWFQLRNPEIKPMSLDVGPKTDRAEVL KQRLKTLRHGASVMSSMVIPKANGEKSINRHPDYEFFLSRSN

Transcript Sequence

Transcript ID	Os04t0675000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:34457427:34463729:-1 gene:Os04g0675000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0103C06.5 protein. (Os04t0675000-01);Hypothetical gene. (Os04t0675000-02);Non-protein coding transcript. (Os04t0675000-03)
Sequence	ATTCTCCCCCTCCTCCTCCTCCTCTTCCACCTCCACCCTACCACTCTCCACCACCCACCC GCCCGTCCGCCTCCCTCCGCTCCGCTGCTGCAGCCAGCCAACCCAGCCTTGCTGCCTCGC GGGCGAACAAAAACCCCCAGAATTCTCCGCGTCGATCTCGCCCCGCCGCGTCCCGGCTCG ACGCGGGCCGGCGCCGTGAGGGTGGGGATCGCATGTGAAGCGCATTGGAGCGGATAACTC GTCTCTATTTGGGGGAATTTTTTTTAGTTTTTTGTTTGGGGTTTCCAATCCTTTTTCTTC GGCGGAGCCGCGAGCGTAGCACGATATGCTGCGGCAACCTGCAAGCACCTCTGGAGATGT TGATAGAATTGCAAACAGGAAGCATCGTCACATAGTGCCTAGGCGTTCAACAGAAAAGAA GAACCCTCATAACATCCAGTTTGAACGTCAAGTAGCTGCGCTTGAATACAGGCAGGAAGA ACAGAGGAAGAGAGCCAATGGTGGTCGTTTATTCTTCACATTGTCTTTATCATCCCATCT CGTGGAAAATGGAGATGAACTTGAGACATCCGCATCACCATCATTGTTACTTTTTCACTT CAATGATCCAGAGGATTTGGCAAGATGTTTAACTTCATCAAGGGCGTTGCTAGAGGACTC CCAACAATCAGACAAAGCCCCTGATAATGATTTCTCAGTCAACACCTTCAGCAACGCGAG TGTGGACGTGAAGCGAACTTCACGAAAGAAAAGCAAAAAGAAAAACAAGAGGCACAAAAG AGTGCATGGCAAAAAAGTATCTGAGGCATCTGACACACAGTCTATGCAGAGCAAGGGTGC TTCTCATTGCATCGATGTTGCTGGTGGTGAATCCTTGACACTTTCATCCAACCATGTGGC TCATGCTGGATCTGAAATGCGGTGTAGAAAGGAGACTTTTCCTTCTATGGCTGATGGAGG TGAAACTTTGACACTGCCTCCAAACCATGTGGCTGACAAATTGTTTGGGGATTTGTCTTC TGATTCTTCAGTGAGAGAAGTTTCTGCGGAGAGACCTGATAGTGAAACTGGTAACGATGG TTCTTTCATAACTCTGATATCAAGTACATCTTGTAGTGATGAGATAGAATTGTCTAGGCA TGCTTCTTATTTTGAATGCTGTGAGCAATCTAACAGCAATAACTCCAGATGTTTGGACAG TGCCTCCACTTCCACTCTTACTGATTCCTCTTTGGATGGCCATTACACAGATAGCAGTTG GAACTTCAGTGATGATACCGAGAACTTGTTGATTGACAAAAATGAGTGCCCTCCGTGTGT TCAGTCAAAAGTGACAGATCTCAGGGGTTCTAAATGTGGTGGCAGTGAAGGTTGGCTAAA CAAAGCAAATCATGATAAATTCTCCTGTTTCAGAAACAGTGCTGATGCTAGCAGTGGTAC ACAAGAAATGCAATCATGCAGTAATGCTAGTAGCGATGGTGATTTCCTCCCAGTAATTTC TAGAAAAAGAGCCCGGAAAAATAGAAAGGTCCAACCTTTGGGGGGTTGTAATGTGGAACA TATTTGTGGTGTTGAGCATGGTCAAAGTGGAAAACAATCCAAAATTTCTTCTAGACCAAG TAATTCTTGCACACAAGTTGCATCAAAAGATTCCACTAAGGATTTCATTCACCCAATTAA AGTTCGCACATGGACTCCACATGAAGTTACACTAAATGATTACATGATAGGAGCAAATAT GAATCACCTCCAGGATCCAAAACAAAACCGTAGGGGGAAACCACATAAGTACTCTTGTTT GAGTGAAGTGGCAAACTGTGGTTTTATTGAAGAGAAGAGTGCCTGTACAGCGAAAATGCT TCCTGGAATTACACACTCAACAGAAACAGGTGTTGGTCAGATAGCATCGAGTTCAGCTTC TGATGTGACGGTCCGAGAGATATCTGAGGAAATTTGTACACCAATAGGTCCTGTGCAGAA AGGAGGGCTGCAGATTTTGCTTCGAGAAGAAAATGTTGTTGGCACAGGTTCTCTTGATGT TTTGAATCATGTTTCTTCTGTTGATTCCGAAGAACAGAAGAAAGTAGATAATGCTGTAAT GAGCAGATCTCATGGCATGGAAGGTCACCATCTACAATCCCAAGATTCAGGTTCTCAGTT CCCTGGATGCACCACAGATTACTGGAAAACTTCCAGGCCTACTGAAAGTGGTTTGGAGGT TGGCTATCATGGTGTATCAGCTTTTGAAGGGCGCTGTAACACGAACCAGCAAAGATCTGT TAGTTCTAAATTGCAATTAGGTGAGATGATCAAGGCTGCAAATGATGCCTGCAAAGTGCA AGGTGCATCAGATGTTCATCTGATTTCTGGTCACCCCCTTGCTGATTTTGAGACTTTTAT ATATTCTGCAAGTCCAGTCATTGCTAAGACATCTTGCATGAGGAATGGCAACTGTTTGCA GGACCCGCAAGCTGGCAGCTCACCATATCAATATCAGATATCGGATGTCTCCTTGAGAAA TGTGTGGGAATGGTATGAGGAACCTGGATCCTATGGATTGGAAGTAGAAATCCATAGAAG TCTCAACTCTACGAGATCAGCTTGTGGTGTCTCAGAGTTCTGTGCTTACTTTTTACCTTC TCTATCTGCTATTCAATTGTTTGAACAGTGCAAGAATAACTTGGACCATAAGTTTGACAG TGATGATGATTTCTTATTATCCCAACCAAATGGTGTGTATTTACCAAAACCATCTTTATC TGTACAAGACCATGGGGAACCCCTGTTTGAATATTTTGAATCAGAGCATCCTTCTTCACG TCCTCCACTTTTTGAGAAGATCAAACAGCTTACCAGTGGTGAAAATCTCTCTACTTGCCA AATATTTGGGGATCCCAAGATGTTGGAAAATCTTAAATTGCGCGATCTTCATCCTGCTTC CTGGTTTTGTGTTGCGTGGTATCCTATTTGCCGAATTCCTCAAGGAAACTGCCGTGCTGC ATTCCTGACTTACCACTCCCTGGGCAAAGTAGTTCCCCAAATTCACTCTCCAGACAAGGC TGATGAACCTACTCATTTGGTTTGTCCAGTTGTTGGTTTCTGGAGTTACAATGACAAGGG AGAGCAATGGTTTCAACTGAGAAACCCAGAGATCAAGCCAATGTCATTAGACGTTGGCCC CAAAACTGATCGTGCTGAAGTCCTGAAACAGAGGCTGAAGACTTTAAGACATGGTGCATC AGTTATGTCAAGCATGGTGATACCCAAGGCCAACGGGGAGAAGTCTATCAACCGTCATCC AGACTATGAATTCTTCCTATCTCGGTCTAACTGAATGGTTGCATGATCTCCACGGCATCG AAATACATCATGTTCTCTCCATTACCTGTACTGTATGGGTCCTAGAACCAGAAGCACCTC CATAGTCCCAACATTCAGAGTTTCAGACTATGCTCTAGCGCGGTACCATCATACCAAGGC TGGAAGTTGATGAGCTTTAGCTCTTTCTAGTAGTAGACTGGTAGCAGAACACCCGAAGGG TTTTTTTTTTTGGTTTTTTGAAAGAGCGACTCGGCCCGTGGGTTTTCGACTTCAGATGCT TGCCCCTTTAAGTAAATCCTTTAAGACTTAGAGCGTTGCTTCTGGGTACCTGCAGATGGG TTCAAGGCCTGTAGTGTATGCTGTTGCTTGCTTGAAATGGGAATTTTTGTCCATGC