Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0674400-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:34423647:34426231:1 gene:Os04g0674400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Anamorsin (Cytokine induced apoptosis inhibitor 1) (CUA001). Splice isoform 2. (Os04t0674400-01)
Sequence	ATGGCGGCGACGGTGGCGGAGGCGCTCGCGGTGACGGACGAACTGGCCTTGCCGCTTCGC GCGGTGGGGGATCTGGCGGCCGCCGCGGGGGTCTCGCGGGAGGAGGTGGTGGTCATCACG CAGTGCGCCTCGCTTGGTGGGAAGTTACCTTTTGATGATGCATCAGTTGGTTCTGTTCTT GCTGTCATTAAGAAAGTGGAAAACTTGGGCGATCTGTTCATAACTGAAATAAGCAGGGTT CTTAAAGCTGGAGGCATGGTGCTTATACAGAGTTCCCCCTCTGATCAGGATCCCAATAAC TCTATTCAGCGCAAGCTACTGTTAGGAGGATTTGTTGACGTGCAAGCTTCTGCTGCAAGT TCCCAGGATAGCGAGCATTCTGTTACTATTAAGGCAAAGAAGGTCTCTTGGAGCTTGGGC TCTTCCTTCCCCCTCAAGAAAGCCACAAAGGGTCTTCCAAAGATTCAGATTGATGATGAT TCTGAACTGATTGATGAAGACAGCCTCTTGACTGAAGACGACTTGAAGAAACCAGAACTT CCAGTTGTTGGGGATTGTGAGGTGGGAGCCACAAGGAAGGCATGCAAGAACTGTACTTGT GGCCGGGCTGAGGCTGAGGAGAAGGTGGAGAAGCTAAATCTCACATCAGAACAGATCAAT AACCCTCAGTCCGCTTGTGGCAATTGTGGGTTGGGCGATGCATTTCGATGTGGTACTTGC CCATACAGAGGTCTACCAGCATTCAAGCCAGGCGAGAAGATTGCCCTACCTGGCAACTTC CTTGCGGCTGACATGTGA

Peptide Sequence

PEP ID	Os04t0674400-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:34423647:34426231:1 gene:Os04g0674400 transcript:Os04t0674400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Anamorsin (Cytokine induced apoptosis inhibitor 1) (CUA001). Splice isoform 2. (Os04t0674400-01)
Sequence	MAATVAEALAVTDELALPLRAVGDLAAAAGVSREEVVVITQCASLGGKLPFDDASVGSVL AVIKKVENLGDLFITEISRVLKAGGMVLIQSSPSDQDPNNSIQRKLLLGGFVDVQASAAS SQDSEHSVTIKAKKVSWSLGSSFPLKKATKGLPKIQIDDDSELIDEDSLLTEDDLKKPEL PVVGDCEVGATRKACKNCTCGRAEAEEKVEKLNLTSEQINNPQSACGNCGLGDAFRCGTC PYRGLPAFKPGEKIALPGNFLAADM

Transcript Sequence

Transcript ID	Os04t0674400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:34423647:34426231:1 gene:Os04g0674400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Anamorsin (Cytokine induced apoptosis inhibitor 1) (CUA001). Splice isoform 2. (Os04t0674400-01)
Sequence	GCTCTTGCGGCGCCGCGGATTCTTCGTCTCCACCACCGCCCTCGACGTCAGATCAGGTGG TGCGGTCGATTTGAATCCATGGCGGCGACGGTGGCGGAGGCGCTCGCGGTGACGGACGAA CTGGCCTTGCCGCTTCGCGCGGTGGGGGATCTGGCGGCCGCCGCGGGGGTCTCGCGGGAG GAGGTGGTGGTCATCACGCAGTGCGCCTCGCTTGGTGGGAAGTTACCTTTTGATGATGCA TCAGTTGGTTCTGTTCTTGCTGTCATTAAGAAAGTGGAAAACTTGGGCGATCTGTTCATA ACTGAAATAAGCAGGGTTCTTAAAGCTGGAGGCATGGTGCTTATACAGAGTTCCCCCTCT GATCAGGATCCCAATAACTCTATTCAGCGCAAGCTACTGTTAGGAGGATTTGTTGACGTG CAAGCTTCTGCTGCAAGTTCCCAGGATAGCGAGCATTCTGTTACTATTAAGGCAAAGAAG GTCTCTTGGAGCTTGGGCTCTTCCTTCCCCCTCAAGAAAGCCACAAAGGGTCTTCCAAAG ATTCAGATTGATGATGATTCTGAACTGATTGATGAAGACAGCCTCTTGACTGAAGACGAC TTGAAGAAACCAGAACTTCCAGTTGTTGGGGATTGTGAGGTGGGAGCCACAAGGAAGGCA TGCAAGAACTGTACTTGTGGCCGGGCTGAGGCTGAGGAGAAGGTGGAGAAGCTAAATCTC ACATCAGAACAGATCAATAACCCTCAGTCCGCTTGTGGCAATTGTGGGTTGGGCGATGCA TTTCGATGTGGTACTTGCCCATACAGAGGTCTACCAGCATTCAAGCCAGGCGAGAAGATT GCCCTACCTGGCAACTTCCTTGCGGCTGACATGTGATGATAGAAGGGAACATCGGCAACA GCAGCAGATAGGAATTGGCTTCTTTAATTTGTTCGTTCGTTAGAATGTTGAAGTTGCTGA CCAAGTATGGGTGTGATAGTAGATGGAAAGAAGAGGACCATTGCTGTAGTCCCTGCTAGG GATTGGGATCCAGTGCAGTTGCTAGGGTAACTGCAACTTAAGCAGTTGCACTAGCACCAC ATGATAACAAATTAATGGTTCTAGCACCTGTATACTGTAGCAGAAATTACTGTTTCACGT GTTTTGTAGCAACAAATCTGGACCATTGGATGAAAATACAAATGGATCTCAATCCCCCTG CTAGTTATCACCACTTTCTGGTTCCCAGGTTTCAGGTGTGAGTGTGACTCGCCTATGCGT TCTGTTTTGATGATATATGTAACTGAGAAAATACTGCACTGTTGTTTCATTGTGAAACTG TCAAATCTCAAATCGCACGTCGCTGCTCTCTGCTGATCTTGCAAGACAGTGACCCCTT