Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0674100-02
CDS Infomation	cds chromosome:IRGSP-1.0:4:34411231:34413183:-1 gene:Os04g0674100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os04t0674100-01);Similar to H0403D02.12 protein. (Os04t0674100-02)
Sequence	ATGGCGGCAGCGGCTGCAACCGCCTTCTCCTGCTCCTTCGCCTCCCCGCGCCACCGCCGG AGTCCCACGACGGCGAGAGCTTCGGGGGCGGCGGTGGAGATTCGGGTCTGCACCAACCGC ACGTGCGCGCGCCAGGGCGGGCGCGAGGTCCTGGCGGCGCTCGAGGGGCTCGCGCCGCCG CGCGTCGACGTGGCCTCCTGCGGTTGCCTCGGCCGCTGCGGGGCGGGCCCAAACTTCGGC GCCTCCGTCTCCGGCGGCGGCGCCGCGGTGTTCGGCCACGTGGGCACCGCCGCGCGCGCC GCGCAGCTCCTGGAGCACCTGCTCGGCGACTCCGGATTCGACGCGGCGGCGGGGCTCGCC GCGCTCGCGGCGCGTGAGAAGGCGGAGGCCGCCCTCGAGAAGGGTGGCGCCGCCGAAGCG GAAGCCCTCCTGACTGAGGCTATCGAGATGAATGCTGGTGGCGGTCTCCACTTGGCGTAC AGAAGCAGGTCTAGGGCTAGATTGTCAATGGGGAATATCACTGGTGCGCTTGCTGATGCC GAGGAAGCAACAAAGATTGCTCCGAAATTTCCTCAGATCGACGGAGGCCCCGAGGATTGC CCCACCCGGCGAGGTGTGTGCTTTGTGACCAACAAGAAGAAACAATAG

Peptide Sequence

PEP ID	Os04t0674100-02
PEP Infomation	pep chromosome:IRGSP-1.0:4:34411231:34413183:-1 gene:Os04g0674100 transcript:Os04t0674100-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os04t0674100-01);Similar to H0403D02.12 protein. (Os04t0674100-02)
Sequence	MAAAAATAFSCSFASPRHRRSPTTARASGAAVEIRVCTNRTCARQGGREVLAALEGLAPP RVDVASCGCLGRCGAGPNFGASVSGGGAAVFGHVGTAARAAQLLEHLLGDSGFDAAAGLA ALAAREKAEAALEKGGAAEAEALLTEAIEMNAGGGLHLAYRSRSRARLSMGNITGALADA EEATKIAPKFPQIDGGPEDCPTRRGVCFVTNKKKQ

Transcript Sequence

Transcript ID	Os04t0674100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:34411231:34413183:-1 gene:Os04g0674100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os04t0674100-01);Similar to H0403D02.12 protein. (Os04t0674100-02)
Sequence	GTCCCCCCGCCTCATCAGAGTTCGTCGGCGGCGATGGCGGCAGCGGCTGCAACCGCCTTC TCCTGCTCCTTCGCCTCCCCGCGCCACCGCCGGAGTCCCACGACGGCGAGAGCTTCGGGG GCGGCGGTGGAGATTCGGGTCTGCACCAACCGCACGTGCGCGCGCCAGGGCGGGCGCGAG GTCCTGGCGGCGCTCGAGGGGCTCGCGCCGCCGCGCGTCGACGTGGCCTCCTGCGGTTGC CTCGGCCGCTGCGGGGCGGGCCCAAACTTCGGCGCCTCCGTCTCCGGCGGCGGCGCCGCG GTGTTCGGCCACGTGGGCACCGCCGCGCGCGCCGCGCAGCTCCTGGAGCACCTGCTCGGC GACTCCGGATTCGACGCGGCGGCGGGGCTCGCCGCGCTCGCGGCGCGTGAGAAGGCGGAG GCCGCCCTCGAGAAGGGTGGCGCCGCCGAAGCGGAAGCCCTCCTGACTGAGGCTATCGAG ATGAATGCTGGTGGCGGTCTCCACTTGGCGTACAGAAGCAGGTCTAGGGCTAGATTGTCA ATGGGGAATATCACTGGTGCGCTTGCTGATGCCGAGGAAGCAACAAAGATTGCTCCGAAA TTTCCTCAGATCGACGGAGGCCCCGAGGATTGCCCCACCCGGCGAGGTGTGTGCTTTGTG ACCAACAAGAAGAAACAATAGACCACATCCTGATTTCCTGCCCGGAATCCGCGCAATTCT GGTGGATTGTAATGAATACCATTGGGCGTCCGGACCTCTTCCCCGCCTCTCAGAATTCCT TCATCTCTTGGTGGTCGGCATCCAGGAAGGGAGTGGCAAAGCAACTCCGCCGTGGTTTCG ATACAGTGGTGGTCCTAGGCGCTTGGTCCATATGGAAAGAAAGGAACAATAGGGTCTTCA ACCAGAAGCAGCGATCGTGGGAGGAGGTTGCTAGGGCAGCAGCAGAGGAGGCCGCCCTCT GGAGACTAGCAGGTCTTCTCCCATAGTAGATCATGGCTGTCGTGGTCGCAAAATTGATGT CACGAGATTATAGCTTAGCCTCCTTTTCTTACCTTTCTTTTTCGGTTTCTATTTCAGTTG CTTTGTAAAGATGTCACAATTTCTCCCCAATCTTAATAAAAAAGATGCGCAGCTCTTTTG CGCATTCTC