Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0674000-03
CDS Infomation

cds chromosome:IRGSP-1.0:4:34400083:34401448:-1 gene:Os04g0674000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0403D02.10 protein. (Os04t0674000-01);Similar to H0403D02.10 protein. (Os04t0674000-03)
Sequence

ATGTTCCTCACCGACAAGTACCACGCGCTTCTCCCTTTCCACGCCAGCGGCGGCGGCGTG
AAGGATCACCGGCGGAGGCCGGGCAAGGCGGTGCCCGGGGCGGCGGGTGGTGGTCCCGGG
TCCGCCCGGTTCGGCGCCGCGCTGTCCGCGAGGCTCGGGAGTTTGCTGCCGCTGCCGGCG
TCGCCGTTGGCTGCGTTGGCGCGGCTCGCGGATCTCCTCGCGCTTGCCCTCGCTGACGCT
GTTCCCGCGTTGGCTGGTGAGGGGGACGCGGCCGCCGTCGCCGCGCACCTCGACGCCGGG
GTCGCGCTGCTCGACGCCTGCAACGGGATCACCGCGCGCCTCGACCGGCTCCGCCGCCGC
CGCCTGCTGTCCCGGTTCGCGCTCCACCTCCTCTCGTCGTCGTCACCACCGCTGCCTTCC
TCGGTCCGCCGCGCGCGCGCCGCGCTCGCCGACCGTGACGAGCGGGCCCCGGCGTCGCCT
CCCCCGCCGCTCCCTTCTCTCCCGTTCGACCAGCCCCGCGACCGCGTCTCCGGCGCCGCG
ACCGTCCTCCTCGCCGTCGACGCCGTCTCCTCGCTCGCAGCGGCGGCCGCGTCCGCCGTC
CTCTGCGGCGACGCCCTCCACCAGATCGCCTTCCCCCTGGTCTCCGGCGAATTCCCGTGG
ACCGAGGCCTTCAACGCCGTGTCCATCCAGCTCGCCGCCCTCGCCACCAAACCCAGCGAG
GTGGACGCCGTCGACGAGGCCGTCGGCAAGCTCAAATCCGTGCTCGACAACGGCGACGGC
GACCTCGACGAGGCGGCGCTGCGGGCGGCGGTGCAGGAGGTGGAGAGGCGGACGGAGGAG
CTGACGGCGCCGTTGGACCGGCTGTCCGACGCCGTCAACGGCGTGTTCCGGGCGGCGCTG
TGCCTCCGCAACGCGGAGCTCGGGAGCATCATGGTGGGACCCGCCGAAAAGACGCCGTGT
AAATAG

Peptide Sequence

PEP ID

Os04t0674000-03
PEP Infomation

pep chromosome:IRGSP-1.0:4:34400083:34401448:-1 gene:Os04g0674000 transcript:Os04t0674000-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0403D02.10 protein. (Os04t0674000-01);Similar to H0403D02.10 protein. (Os04t0674000-03)
Sequence

MFLTDKYHALLPFHASGGGVKDHRRRPGKAVPGAAGGGPGSARFGAALSARLGSLLPLPA
SPLAALARLADLLALALADAVPALAGEGDAAAVAAHLDAGVALLDACNGITARLDRLRRR
RLLSRFALHLLSSSSPPLPSSVRRARAALADRDERAPASPPPPLPSLPFDQPRDRVSGAA
TVLLAVDAVSSLAAAAASAVLCGDALHQIAFPLVSGEFPWTEAFNAVSIQLAALATKPSE
VDAVDEAVGKLKSVLDNGDGDLDEAALRAAVQEVERRTEELTAPLDRLSDAVNGVFRAAL
CLRNAELGSIMVGPAEKTPCK

Transcript Sequence

Transcript ID

Os04t0674000-03
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:34400083:34401448:-1 gene:Os04g0674000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0403D02.10 protein. (Os04t0674000-01);Similar to H0403D02.10 protein. (Os04t0674000-03)
Sequence

GTCTCCGCCGCGAGCTTCACCTGAATCCGATCCGATCACCCTTAGCAACCCAGATGTTCC
TCACCGACAAGTACCACGCGCTTCTCCCTTTCCACGCCAGCGGCGGCGGCGTGAAGGATC
ACCGGCGGAGGCCGGGCAAGGCGGTGCCCGGGGCGGCGGGTGGTGGTCCCGGGTCCGCCC
GGTTCGGCGCCGCGCTGTCCGCGAGGCTCGGGAGTTTGCTGCCGCTGCCGGCGTCGCCGT
TGGCTGCGTTGGCGCGGCTCGCGGATCTCCTCGCGCTTGCCCTCGCTGACGCTGTTCCCG
CGTTGGCTGGTGAGGGGGACGCGGCCGCCGTCGCCGCGCACCTCGACGCCGGGGTCGCGC
TGCTCGACGCCTGCAACGGGATCACCGCGCGCCTCGACCGGCTCCGCCGCCGCCGCCTGC
TGTCCCGGTTCGCGCTCCACCTCCTCTCGTCGTCGTCACCACCGCTGCCTTCCTCGGTCC
GCCGCGCGCGCGCCGCGCTCGCCGACCGTGACGAGCGGGCCCCGGCGTCGCCTCCCCCGC
CGCTCCCTTCTCTCCCGTTCGACCAGCCCCGCGACCGCGTCTCCGGCGCCGCGACCGTCC
TCCTCGCCGTCGACGCCGTCTCCTCGCTCGCAGCGGCGGCCGCGTCCGCCGTCCTCTGCG
GCGACGCCCTCCACCAGATCGCCTTCCCCCTGGTCTCCGGCGAATTCCCGTGGACCGAGG
CCTTCAACGCCGTGTCCATCCAGCTCGCCGCCCTCGCCACCAAACCCAGCGAGGTGGACG
CCGTCGACGAGGCCGTCGGCAAGCTCAAATCCGTGCTCGACAACGGCGACGGCGACCTCG
ACGAGGCGGCGCTGCGGGCGGCGGTGCAGGAGGTGGAGAGGCGGACGGAGGAGCTGACGG
CGCCGTTGGACCGGCTGTCCGACGCCGTCAACGGCGTGTTCCGGGCGGCGCTGTGCCTCC
GCAACGCGGAGCTCGGGAGCATCATGGTGGGACCCGCCGAAAAGACGCCGTGTAAATAGC
CGTTTCCACCGTGTGTCGTCCGTAGCCATACTGGTATGTCACTGTATAAATACAAGTATA
ATTCTGGAAGTAGTACAGTTCTACAGGTACAGGGCAACATGGGGTGGTGTCTCAGCCAAA
TGCAGTGGTTTGGTGCTTTTTCTACCAGCTGTTACTACTATCTGTGTGTCAAGGTTGCCA
CATATGAGAACACAGTGCAATTCGCACCCTTTTGCAGATGTGGAATCCAGTAAAAACTTG
GGAAAACCGTGGCAACTGTTCACCTACCTATGTAATTTTGCGGCTTCATACATACTGTAT
GTATACCATGAGGAACTTTGTGAAGAAAATCTCTCTTACCGACTTC