Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0672300-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:34321350:34324747:-1 gene:Os04g0672300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0322F07.3 protein. (Os04t0672300-01)
Sequence

ATGACAAGCATGGACAAGGCAGCAAATGTGGTATTGGATATTGAAGGGCTGCCTCAGCAA
CCTGATAAATGCTGCACTGGAAGTCCAAAAATGACTAGAGCCCTATCTCGCAAGGGCTCA
AATCGCATGGAAAGGAGGAGCGGTGAAGAGCAGGAACAAGATGACTTGGTGAAGAAACTT
ATTATTAAGGTTGTGCCATCTCAGTTGGAGCAGCTTAAGATGCCCCTGGTGCAGAACAAA
GCCTTGGTCACTCCACAATCACAATGTGCTGCCTGTGCACCTATTCTAACTGACTCTGGG
GAAGGAAGGAACAAGAAGTTTAATCGACTTACTTCGGTTCACCCCCGGAAAATCCTACTG
TTCTTTGCAACTCTGTCGAGCGTGGGCACAATGATACTGATATACTTCACGCTCGCAATC
AACGGTGGCAAAGCGGAGGCGTAG

Peptide Sequence

PEP ID

Os04t0672300-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:34321350:34324747:-1 gene:Os04g0672300 transcript:Os04t0672300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0322F07.3 protein. (Os04t0672300-01)
Sequence

MTSMDKAANVVLDIEGLPQQPDKCCTGSPKMTRALSRKGSNRMERRSGEEQEQDDLVKKL
IIKVVPSQLEQLKMPLVQNKALVTPQSQCAACAPILTDSGEGRNKKFNRLTSVHPRKILL
FFATLSSVGTMILIYFTLAINGGKAEA

Transcript Sequence

Transcript ID

Os04t0672300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:34321350:34324747:-1 gene:Os04g0672300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0322F07.3 protein. (Os04t0672300-01)
Sequence

GAGGCGAGCACTAAGAGTATTTTTGACGTGTTTACCGGAATGTATTTCCGCTATTGCTCC
GAAATGGTTTAGATAGCAAGGAGGCCGCAGAGAAGTGGAGAGGACTCACGAATCACGATC
CATTTCTATCTTGAGGGAATTGGGGATAGCAAAAGTCAGTGAAAAGGGCCAGATGACAAG
CATGGACAAGGCAGCAAATGTGGTATTGGATATTGAAGGGCTGCCTCAGCAACCTGATAA
ATGCTGCACTGGAAGTCCAAAAATGACTAGAGCCCTATCTCGCAAGGGCTCAAATCGCAT
GGAAAGGAGGAGCGGTGAAGAGCAGGAACAAGATGACTTGGTGAAGAAACTTATTATTAA
GGTTGTGCCATCTCAGTTGGAGCAGCTTAAGATGCCCCTGGTGCAGAACAAAGCCTTGGT
CACTCCACAATCACAATGTGCTGCCTGTGCACCTATTCTAACTGACTCTGGGGAAGGAAG
GAACAAGAAGTTTAATCGACTTACTTCGGTTCACCCCCGGAAAATCCTACTGTTCTTTGC
AACTCTGTCGAGCGTGGGCACAATGATACTGATATACTTCACGCTCGCAATCAACGGTGG
CAAAGCGGAGGCGTAGTCGTCACCGGAGCGAAACACGACAACGGTTTCAGAAGTGCATTT
CATAGCTGGAATTTTCGCTTCTCGTTATCAGATTTTGGTTTGTTTGGGAGGAGAGAACTG
GAGGAGGAAGCAACAGTAGCAGCAGCAATGATGCAGCCAGGCTCTCATGCCTGACACACA
ATGCTGGGAGTGTTGCTCGATCAGTGCTCCATTGTCACCTTTGCCTGACCTGATCTCCCT
GAATTCTTTTGATCTGTACATGTAAATTGCTGTGAGGCCTTTGTTGAGAGGTAGAGAGAG
AGAGAAAGAGAGATCCATGGATTGTTGTTGGTGTAAATGAGCTGGGGCGAAGCTATCCAT
TTCTGCCATGCGAGTCCCAGCTTAGCTGTAAAAGATCTGAAGCG