Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0671700-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:34267955:34270846:-1 gene:Os04g0671700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DJ-1/PfpI domain containing protein C, DJ-1 protein C description:ThiJ/PfpI domain containing protein. (Os04t0671700-01)
Sequence

ATGGCTCCCAAGAAGGTGCTCCTGCTCTGCGGAGACTACATGGAGGACTACGAGGCCATG
GTTCCGTTCCAAGCGCTGCAAGCGTACGGGGTGTCCGTGGATGCTGCCTGCCCCGGCAAG
AAGGCCGGCGACTCGTGCCGCACCGCCGTCCATCAGGGGATTGGCCACCAGACATATGCT
GAGTCAAGGGGCCACAATTTCGCACTTAATGCTTCGTTTGATGAGGTTAATATCAATGAA
TATGATGGCTTGGTAATTCCTGGAGGCCGTGCACCAGAGTATCTCGCCATGGATGAAAAG
GTTCTTGATTTAGTAAGGAAATTCTCTGATGCGAAGAAACCTATTGCATCAGTTTGCCAT
GGACAGTTGATTTTGGCAGCAGCTGGAGTAGTCCAGAACCGTAAATGCACCGCATATCCT
GCTGTTAAACCAGTTTTGGTTGCTGCTGGTGCTAAGTGGGAAGAAGCTGATACTATGGAC
AAATGCACAGTTGATGGAAATCTTGTCACTGCAGTGGCTTACGATGCACATCCTGAATTC
ATCAGCCTTTTTGTGAAAGCGCTTGGAGGCTCTGTAACTGGCTCAAACAAACGGATATTG
TTCCTTTGTGGGGATTACATGGAAGATTATGAGGTTATGGTACCATTTCAGTCTCTTCAA
GCCCTTGGTTGCCATGTTGATGCAGTTTGCCCTGACAAGGGTGCTGGGGAGAAATGCCCA
ACTGCCATACATGACTTTGAAGGTGACCAAACATACAGCGAGAAGCCTGGTCACGATTTT
GCTTTGACAGCATCATTTGACAATGTGGATGCATCAAGCTATGATGCACTTGTAATTCCT
GGTGGACGGGCTCCTGAGTACCTTGCACTGAACGATAAAGTCATTAGCCTTGTGAAGGGC
TTCATGGATAAAGCAAAGCCAGTCGCCTCAATTTGCCATGGCCAACAGATTTTATCTGCT
GCTGGAGTCCTTCAGGGAAGGAAATGCACGGCGTATCCTGCGGTGAAGCTGAACGTGGTG
CTTGGCGGGGCGACATGGCTGGAGCCCAATCCCATTGACCGCTGCTTCACCGACGGCAAC
CTTGTGACCGGCGCGGCATGGCCTGGCCACCCGGAGTTCATCTCCCAGCTCATGGCATTG
CTTGGCATCAAGGTCTCCTTCTGA

Peptide Sequence

PEP ID

Os04t0671700-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:34267955:34270846:-1 gene:Os04g0671700 transcript:Os04t0671700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DJ-1/PfpI domain containing protein C, DJ-1 protein C description:ThiJ/PfpI domain containing protein. (Os04t0671700-01)
Sequence

MAPKKVLLLCGDYMEDYEAMVPFQALQAYGVSVDAACPGKKAGDSCRTAVHQGIGHQTYA
ESRGHNFALNASFDEVNINEYDGLVIPGGRAPEYLAMDEKVLDLVRKFSDAKKPIASVCH
GQLILAAAGVVQNRKCTAYPAVKPVLVAAGAKWEEADTMDKCTVDGNLVTAVAYDAHPEF
ISLFVKALGGSVTGSNKRILFLCGDYMEDYEVMVPFQSLQALGCHVDAVCPDKGAGEKCP
TAIHDFEGDQTYSEKPGHDFALTASFDNVDASSYDALVIPGGRAPEYLALNDKVISLVKG
FMDKAKPVASICHGQQILSAAGVLQGRKCTAYPAVKLNVVLGGATWLEPNPIDRCFTDGN
LVTGAAWPGHPEFISQLMALLGIKVSF

Transcript Sequence

Transcript ID

Os04t0671700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:34267955:34270846:-1 gene:Os04g0671700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DJ-1/PfpI domain containing protein C, DJ-1 protein C description:ThiJ/PfpI domain containing protein. (Os04t0671700-01)
Sequence

AGTCTCTCGGCTTCTAGACTAGGGAAGCTCACCAACCCAAGAACAAGAAGTGATCGGAGA
TGGCTCCCAAGAAGGTGCTCCTGCTCTGCGGAGACTACATGGAGGACTACGAGGCCATGG
TTCCGTTCCAAGCGCTGCAAGCGTACGGGGTGTCCGTGGATGCTGCCTGCCCCGGCAAGA
AGGCCGGCGACTCGTGCCGCACCGCCGTCCATCAGGGGATTGGCCACCAGACATATGCTG
AGTCAAGGGGCCACAATTTCGCACTTAATGCTTCGTTTGATGAGGTTAATATCAATGAAT
ATGATGGCTTGGTAATTCCTGGAGGCCGTGCACCAGAGTATCTCGCCATGGATGAAAAGG
TTCTTGATTTAGTAAGGAAATTCTCTGATGCGAAGAAACCTATTGCATCAGTTTGCCATG
GACAGTTGATTTTGGCAGCAGCTGGAGTAGTCCAGAACCGTAAATGCACCGCATATCCTG
CTGTTAAACCAGTTTTGGTTGCTGCTGGTGCTAAGTGGGAAGAAGCTGATACTATGGACA
AATGCACAGTTGATGGAAATCTTGTCACTGCAGTGGCTTACGATGCACATCCTGAATTCA
TCAGCCTTTTTGTGAAAGCGCTTGGAGGCTCTGTAACTGGCTCAAACAAACGGATATTGT
TCCTTTGTGGGGATTACATGGAAGATTATGAGGTTATGGTACCATTTCAGTCTCTTCAAG
CCCTTGGTTGCCATGTTGATGCAGTTTGCCCTGACAAGGGTGCTGGGGAGAAATGCCCAA
CTGCCATACATGACTTTGAAGGTGACCAAACATACAGCGAGAAGCCTGGTCACGATTTTG
CTTTGACAGCATCATTTGACAATGTGGATGCATCAAGCTATGATGCACTTGTAATTCCTG
GTGGACGGGCTCCTGAGTACCTTGCACTGAACGATAAAGTCATTAGCCTTGTGAAGGGCT
TCATGGATAAAGCAAAGCCAGTCGCCTCAATTTGCCATGGCCAACAGATTTTATCTGCTG
CTGGAGTCCTTCAGGGAAGGAAATGCACGGCGTATCCTGCGGTGAAGCTGAACGTGGTGC
TTGGCGGGGCGACATGGCTGGAGCCCAATCCCATTGACCGCTGCTTCACCGACGGCAACC
TTGTGACCGGCGCGGCATGGCCTGGCCACCCGGAGTTCATCTCCCAGCTCATGGCATTGC
TTGGCATCAAGGTCTCCTTCTGAAGCAACGAGAGGTCAGGTCCCAGCGTTTTTGCACGCG
ATATAGCAAGACACAGCTTTGGGCTTTCGTCTAAGATATATACAGTCTTACCGATACTGT
ACCAGTCTGCTGTCGTTTTTTGTGCTTGAAATAATAAGATAATTACT