Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0671300-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:34244273:34248323:-1 gene:Os04g0671300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:POLYAMINE OXIDASE 5 description:Polyamine oxidase, Seed germination (Os04t0671300-01)
Sequence	ATGGACCAGCCTTCTAATGGCTTCGCCGCCGGAGGTCTTTTTCTTCGTCACATTGATGGG CAAAATGCCTCTCCCCCTTCTGTCATTGTGATTGGTGGAGGGATTTCAGGCATTGCAGCT GCTCGTGCGCTGTCTAATGCTTCGTTTAAGGTCACACTATTAGAGTCACGGGACCGACTT GGTGGCCGTGTGCATACTGACTATTCTTTTGGCTGCCCAATTGACATGGGAGCATCTTGG TTGCATGGTGTATGCAATGAGAATTCATTGGCACCACTGATTAGGTTGCTTGGCCTTAGA TTATATCGCACCAGTGGTGATAACTCTGTGCTATATGACCATGATCTGGAGAGCTATGCT CTCTTTGATAAGGATGGTCGTCAAGTTCCCCAGGAGATAGTGACAAAAGTCGGGGAAACA TTTGAGAAAATTCTTAAGGAGACGGTGAAAGTAAGAGCTGAACATGAAGATGACATGCCT CTTATTCAAGCCATCTCAATTGTGCTTGACAGGAATCCACACCTAAAGCTTGATGGTTTG CAATATGAAGTACTGCAGTGGTGCATATGTAGGCTGGAGGCATGGTTTGCCACAGATGTG GATAATATATCTCTGAAAAATTGGGATCAGGAACATGTTCTTACTGGTGGCCATGGGCTT ATGGTGCATGGTTATGATCCTGTTATCAAAGCTCTCGCGCAAGATCTTGATATCCACCTG AACCACAGGGTTACCAAAATCATCCAGAGGTACAACAAAACTATAGTATGTGTTGAAGAT GGGACAAGCTTTGTTGCAGATGCTGCTATAATAACTGTCCCTCTTGGTGTACTTAAAGCA AATATCATCAAGTTTGAACCTGAGCTCCCAGATTGGAAGCTTTCATCAATATCTGATCTT GGTATTGGCATTGAGAACAAAATAGCCCTCCGCTTCAATAGTGTATTTTGGCCAAATGTA GAAGTGCTAGGCAGGGTTGCCCCAACATCAAATGCCTGCGGTTACTTTCTTAACCTTCAC AAAGCCACAGGGCATCCGGTTCTTGTATGCATGGTAGCAGGAAGATTCGCATATGAATTC GAGAAGCTATCCGATGAAGAATCCGTAAACTTTGTCATGTCTCAGCTCAAGAAAATGCTA CCAGGAGCTACTGAACCGGTCCAGTATTTGGTTTCAAGGTGGGGAACCGACCCGAATTCG CTTGGTTCTTATTCCTGCGACCTTGTTGGGAAGCCAGCTGACTTGTATGAAAGATTCTGT GCTCCGGTGGGCAACCTGTTTTTCGCTGGGGAGGCCGCCTGCATCGATCACTCTGGGTCC GTGCATGGAGCTTATTCTTCAGGCATTGTTGCTGCAGAGGATTGCCGAAGGCATCTGTCG ACGCAGCTAGGCATCTCCGACCTTTTCCAGGTTGGGAAGATTATCATGAGGGAGGAGATG ACTGAAGTCATGGTCCCCTTCCAGATATCCAGGCTGTGA

Peptide Sequence

PEP ID	Os04t0671300-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:34244273:34248323:-1 gene:Os04g0671300 transcript:Os04t0671300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:POLYAMINE OXIDASE 5 description:Polyamine oxidase, Seed germination (Os04t0671300-01)
Sequence	MDQPSNGFAAGGLFLRHIDGQNASPPSVIVIGGGISGIAAARALSNASFKVTLLESRDRL GGRVHTDYSFGCPIDMGASWLHGVCNENSLAPLIRLLGLRLYRTSGDNSVLYDHDLESYA LFDKDGRQVPQEIVTKVGETFEKILKETVKVRAEHEDDMPLIQAISIVLDRNPHLKLDGL QYEVLQWCICRLEAWFATDVDNISLKNWDQEHVLTGGHGLMVHGYDPVIKALAQDLDIHL NHRVTKIIQRYNKTIVCVEDGTSFVADAAIITVPLGVLKANIIKFEPELPDWKLSSISDL GIGIENKIALRFNSVFWPNVEVLGRVAPTSNACGYFLNLHKATGHPVLVCMVAGRFAYEF EKLSDEESVNFVMSQLKKMLPGATEPVQYLVSRWGTDPNSLGSYSCDLVGKPADLYERFC APVGNLFFAGEAACIDHSGSVHGAYSSGIVAAEDCRRHLSTQLGISDLFQVGKIIMREEM TEVMVPFQISRL

Transcript Sequence

Transcript ID	Os04t0671300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:34244273:34248323:-1 gene:Os04g0671300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:POLYAMINE OXIDASE 5 description:Polyamine oxidase, Seed germination (Os04t0671300-01)
Sequence	ACCGCATCATCGGCTTCCCTCCGGCTCGAGCCAATCTCTCGCTGTGTCTCTCTCGCGCTC TCCACTAGCACCGGCTCGGCTCGGCTCGCGCGGCGGCGGCGGCGGGGCGGCGTGGCGCCG AGGGAGGGGAACGCCGGTGTGGGGAGGGCGGCGGCGAGGGGACTCGCCGGCGACGAGCTG GTTTGGGTATGAGAGGGGTTACCCATGCGGCGCCGACCACGAGCGTCCCCCGCCGCGGCT CCATGGACGGCCTCCTCATCTTCGTCTTCTACCTCTCGCTTCCTATACGTGGTGGCCGCG ACCACTCGTTAATCTCCTCCTCTAATTGTTAGCCGATCTCGCCTCTCCCCCACACTCTCT GATCCCGCTCTCTCTCTCTGCTTCGATTCGATTCGATTCGATCTTCTCCACCTCGTCGCC GTCGAACGCAACTCGGATCGGGAGGATAATGGACCAGCCTTCTAATGGCTTCGCCGCCGG AGGTCTTTTTCTTCGTCACATTGATGGGCAAAATGCCTCTCCCCCTTCTGTCATTGTGAT TGGTGGAGGGATTTCAGGCATTGCAGCTGCTCGTGCGCTGTCTAATGCTTCGTTTAAGGT CACACTATTAGAGTCACGGGACCGACTTGGTGGCCGTGTGCATACTGACTATTCTTTTGG CTGCCCAATTGACATGGGAGCATCTTGGTTGCATGGTGTATGCAATGAGAATTCATTGGC ACCACTGATTAGGTTGCTTGGCCTTAGATTATATCGCACCAGTGGTGATAACTCTGTGCT ATATGACCATGATCTGGAGAGCTATGCTCTCTTTGATAAGGATGGTCGTCAAGTTCCCCA GGAGATAGTGACAAAAGTCGGGGAAACATTTGAGAAAATTCTTAAGGAGACGGTGAAAGT AAGAGCTGAACATGAAGATGACATGCCTCTTATTCAAGCCATCTCAATTGTGCTTGACAG GAATCCACACCTAAAGCTTGATGGTTTGCAATATGAAGTACTGCAGTGGTGCATATGTAG GCTGGAGGCATGGTTTGCCACAGATGTGGATAATATATCTCTGAAAAATTGGGATCAGGA ACATGTTCTTACTGGTGGCCATGGGCTTATGGTGCATGGTTATGATCCTGTTATCAAAGC TCTCGCGCAAGATCTTGATATCCACCTGAACCACAGGGTTACCAAAATCATCCAGAGGTA CAACAAAACTATAGTATGTGTTGAAGATGGGACAAGCTTTGTTGCAGATGCTGCTATAAT AACTGTCCCTCTTGGTGTACTTAAAGCAAATATCATCAAGTTTGAACCTGAGCTCCCAGA TTGGAAGCTTTCATCAATATCTGATCTTGGTATTGGCATTGAGAACAAAATAGCCCTCCG CTTCAATAGTGTATTTTGGCCAAATGTAGAAGTGCTAGGCAGGGTTGCCCCAACATCAAA TGCCTGCGGTTACTTTCTTAACCTTCACAAAGCCACAGGGCATCCGGTTCTTGTATGCAT GGTAGCAGGAAGATTCGCATATGAATTCGAGAAGCTATCCGATGAAGAATCCGTAAACTT TGTCATGTCTCAGCTCAAGAAAATGCTACCAGGAGCTACTGAACCGGTCCAGTATTTGGT TTCAAGGTGGGGAACCGACCCGAATTCGCTTGGTTCTTATTCCTGCGACCTTGTTGGGAA GCCAGCTGACTTGTATGAAAGATTCTGTGCTCCGGTGGGCAACCTGTTTTTCGCTGGGGA GGCCGCCTGCATCGATCACTCTGGGTCCGTGCATGGAGCTTATTCTTCAGGCATTGTTGC TGCAGAGGATTGCCGAAGGCATCTGTCGACGCAGCTAGGCATCTCCGACCTTTTCCAGGT TGGGAAGATTATCATGAGGGAGGAGATGACTGAAGTCATGGTCCCCTTCCAGATATCCAG GCTGTGAAAGAAGAACAAAGCCTGCCTATTTAGCACCGTGTTTATCCTGCAGCTGCTATG GTTAATATTGTAGCTGCTGCTCTGTAGTTTCCTAATTATCTCAGATCCTGTACCGTTTCA CAGTTTGATCGTTTATGTGTATTCAAATAAAAACAGAATAATTATATATCAACAGACCTT GTTCTCTGAATC