Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0670500-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:34205994:34207906:1 gene:Os04g0670500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYSTEINE PROTEASE 1 description:Cysteine protease 1 precursor (EC 3.4.22.-) (OsCP1). (Os04t0670500-01)
Sequence	ATGGCAGGCGGTGGCGGCAAGTCCGTAGCGGCGGCGCTGGCCATGGCCTGCTTCCTCCTC ATCCTCGCCGCCTTCGCTCCCCCGGCGGCGGCGGCGCCGCCGGACATCATGTCGATCATC AGGTACAACGCGGAGCACGGGGTGCGGGGGCTGGAGCGGACGGAGGCCGAGGCGCGCGCC GCGTACGACCTGTGGTTGGCGCGGCACCGGCGCGGCGGCGGCGGCGGCTCGCGCAACGGG TTCATCGGCGAGCACGAGCGCCGGTTCCGCGTGTTCTGGGACAACCTCAAGTTCGTCGAC GCCCACAACGCCCGCGCCGACGAGCGCGGCGGGTTCCGCCTCGGGATGAACCGCTTCGCC GACCTCACCAACGGCGAGTTCCGCGCCACCTACCTCGGCACCACGCCCGCCGGCAGGGGG CGCCGCGTCGGGGAGGCGTACCGCCACGACGGCGTCGAGGCGCTGCCGGACTCCGTGGAC TGGAGGGACAAGGGCGCCGTCGTCGCCCCCGTCAAGAACCAGGGCCAGTGCGGTAGCTGC TGGGCGTTCTCGGCGGTCGCCGCCGTGGAGGGCATCAACAAGATCGTCACCGGCGAGCTG GTGTCGCTGTCGGAGCAGGAGCTGGTGGAGTGCGCGAGGAACGGGCAGAACAGCGGCTGC AACGGTGGGATCATGGACGACGCGTTCGCCTTCATCGCCCGGAACGGCGGCCTCGACACG GAGGAGGACTACCCGTACACGGCCATGGACGGCAAGTGCAACCTCGCCAAGAGGAGCCGC AAGGTGGTGTCCATCGACGGCTTCGAGGACGTGCCCGAGAACGACGAGCTGTCGCTCCAG AAGGCCGTGGCGCACCAGCCCGTCAGCGTCGCCATCGACGCCGGCGGCCGCGAGTTCCAG CTCTACGACTCCGGCGTGTTCACCGGCCGGTGCGGCACCAACCTGGACCACGGCGTGGTG GCGGTGGGGTACGGCACGGACGCCGCCACCGGCGCCGCCTACTGGACGGTGCGCAACTCG TGGGGGCCCGACTGGGGCGAGAACGGCTACATCCGCATGGAGCGCAACGTCACCGCGCGC ACCGGCAAGTGCGGCATCGCCATGATGGCGTCCTACCCGATCAAGAAGGGGCCCAACCCG AAGCCGTCGCCGCCGTCTCCGGCGCCATCGCCGCCGCAGCAATGCGACCGGTACAGCAAG TGCCCGGCGGGGACCACCTGCTGCTGCAACTACGGGATCAGGAACCACTGCATCGTGTGG GGATGCTGCCCCGTCGAGGGCGCCACCTGCTGCAAGGATCACTCCACCTGCTGCCCCAAG GAGTATCCCGTCTGCAACGCCAAGGCTCGCACTTGCTCCAAGAGCAAGAACAGCCCGTAC AATATCAGGACTCCGGCGGCGATGGCACGAAGTGTTCCGGAACAACCTGATTCAATCTCT TTTGTAGTTTTGAATAGGGAAGATCTAGTATAG

Peptide Sequence

PEP ID	Os04t0670500-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:34205994:34207906:1 gene:Os04g0670500 transcript:Os04t0670500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYSTEINE PROTEASE 1 description:Cysteine protease 1 precursor (EC 3.4.22.-) (OsCP1). (Os04t0670500-01)
Sequence	MAGGGGKSVAAALAMACFLLILAAFAPPAAAAPPDIMSIIRYNAEHGVRGLERTEAEARA AYDLWLARHRRGGGGGSRNGFIGEHERRFRVFWDNLKFVDAHNARADERGGFRLGMNRFA DLTNGEFRATYLGTTPAGRGRRVGEAYRHDGVEALPDSVDWRDKGAVVAPVKNQGQCGSC WAFSAVAAVEGINKIVTGELVSLSEQELVECARNGQNSGCNGGIMDDAFAFIARNGGLDT EEDYPYTAMDGKCNLAKRSRKVVSIDGFEDVPENDELSLQKAVAHQPVSVAIDAGGREFQ LYDSGVFTGRCGTNLDHGVVAVGYGTDAATGAAYWTVRNSWGPDWGENGYIRMERNVTAR TGKCGIAMMASYPIKKGPNPKPSPPSPAPSPPQQCDRYSKCPAGTTCCCNYGIRNHCIVW GCCPVEGATCCKDHSTCCPKEYPVCNAKARTCSKSKNSPYNIRTPAAMARSVPEQPDSIS FVVLNREDLV

Transcript Sequence

Transcript ID	Os04t0670500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:34205994:34207906:1 gene:Os04g0670500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYSTEINE PROTEASE 1 description:Cysteine protease 1 precursor (EC 3.4.22.-) (OsCP1). (Os04t0670500-01)
Sequence	ATAGCACAAGCCAACCAAACACCGCACGATTTCGTATCCACACATACTTCTACGTGATTT CGTTTCGACGATCTCGAGGCGCCGCGGCGTGACGTGACGTCGACGACAACCATGGCAGGC GGTGGCGGCAAGTCCGTAGCGGCGGCGCTGGCCATGGCCTGCTTCCTCCTCATCCTCGCC GCCTTCGCTCCCCCGGCGGCGGCGGCGCCGCCGGACATCATGTCGATCATCAGGTACAAC GCGGAGCACGGGGTGCGGGGGCTGGAGCGGACGGAGGCCGAGGCGCGCGCCGCGTACGAC CTGTGGTTGGCGCGGCACCGGCGCGGCGGCGGCGGCGGCTCGCGCAACGGGTTCATCGGC GAGCACGAGCGCCGGTTCCGCGTGTTCTGGGACAACCTCAAGTTCGTCGACGCCCACAAC GCCCGCGCCGACGAGCGCGGCGGGTTCCGCCTCGGGATGAACCGCTTCGCCGACCTCACC AACGGCGAGTTCCGCGCCACCTACCTCGGCACCACGCCCGCCGGCAGGGGGCGCCGCGTC GGGGAGGCGTACCGCCACGACGGCGTCGAGGCGCTGCCGGACTCCGTGGACTGGAGGGAC AAGGGCGCCGTCGTCGCCCCCGTCAAGAACCAGGGCCAGTGCGGTAGCTGCTGGGCGTTC TCGGCGGTCGCCGCCGTGGAGGGCATCAACAAGATCGTCACCGGCGAGCTGGTGTCGCTG TCGGAGCAGGAGCTGGTGGAGTGCGCGAGGAACGGGCAGAACAGCGGCTGCAACGGTGGG ATCATGGACGACGCGTTCGCCTTCATCGCCCGGAACGGCGGCCTCGACACGGAGGAGGAC TACCCGTACACGGCCATGGACGGCAAGTGCAACCTCGCCAAGAGGAGCCGCAAGGTGGTG TCCATCGACGGCTTCGAGGACGTGCCCGAGAACGACGAGCTGTCGCTCCAGAAGGCCGTG GCGCACCAGCCCGTCAGCGTCGCCATCGACGCCGGCGGCCGCGAGTTCCAGCTCTACGAC TCCGGCGTGTTCACCGGCCGGTGCGGCACCAACCTGGACCACGGCGTGGTGGCGGTGGGG TACGGCACGGACGCCGCCACCGGCGCCGCCTACTGGACGGTGCGCAACTCGTGGGGGCCC GACTGGGGCGAGAACGGCTACATCCGCATGGAGCGCAACGTCACCGCGCGCACCGGCAAG TGCGGCATCGCCATGATGGCGTCCTACCCGATCAAGAAGGGGCCCAACCCGAAGCCGTCG CCGCCGTCTCCGGCGCCATCGCCGCCGCAGCAATGCGACCGGTACAGCAAGTGCCCGGCG GGGACCACCTGCTGCTGCAACTACGGGATCAGGAACCACTGCATCGTGTGGGGATGCTGC CCCGTCGAGGGCGCCACCTGCTGCAAGGATCACTCCACCTGCTGCCCCAAGGAGTATCCC GTCTGCAACGCCAAGGCTCGCACTTGCTCCAAGAGCAAGAACAGCCCGTACAATATCAGG ACTCCGGCGGCGATGGCACGAAGTGTTCCGGAACAACCTGATTCAATCTCTTTTGTAGTT TTGAATAGGGAAGATCTAGTATAGAAGCCTTATCTTTGTTACTGTTACCGAGTCCTTTAT TATTATCGCTCTTTTTTTTTCGCAAGATGTATAAAGTCCTAAACAGTTACTGTTACTATT ACTGAAGTTATTATCTATCTTTGGATATGAGTTCTCCCAA