Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0670200-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:34173356:34176732:-1 gene:Os04g0670200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Oryzain beta chain precursor (EC 3.4.22.-). (Os04t0670200-01);Granulin domain containing protein. (Os04t0670200-02)
Sequence	ATGGCCGCCCGCGCCGCCGCCGCCGCGTTCCTGCTGCTGCTCATCGTCGGCGCGGCCACC GCGGCGCCGGACATGTCGATCATCTCCTACAACGCGGAGCACGGGGCGCGGGGGCTGGAG GAGGGGCCCACGGAGGCCGAGGCGCGCGCCGCGTACGACCTCTGGCTCGCCGAGAACGGC GGCGGCTCGCCCAACGCGCTCGGCGGCGAGCACGAGCGCCGGTTCCTCGTGTTCTGGGAC AACCTCAAGTTCGTCGACGCCCACAACGCCCGCGCCGACGAGCGCGGCGGGTTCCGCCTC GGGATGAACCGCTTCGCCGATCTCACCAACGAGGAGTTCCGCGCGACCTTCCTCGGCGCC AAGGTCGCCGAGAGGAGCCGCGCCGCCGGGGAGAGGTACCGCCACGACGGGGTGGAGGAG CTGCCGGAGTCCGTCGACTGGAGGGAGAAGGGCGCCGTCGCCCCCGTCAAGAACCAGGGC CAATGCGGAAGCTGCTGGGCCTTCTCCGCAGTAAGCACAGTAGAAAGCATCAACCAACTT GTTACTGGTGAGATGATCACATTGTCGGAACAAGAACTTGTAGAATGCTCAACCAATGGA CAGAACAGTGGCTGCAACGGTGGGCTCATGGATGATGCCTTTGACTTCATCATTAAGAAT GGAGGCATTGATACTGAAGATGACTATCCTTACAAAGCTGTAGATGGCAAGTGTGACATC AACAGGGAAAATGCTAAGGTTGTGAGCATCGATGGCTTTGAGGATGTACCTCAAAATGAT GAGAAATCACTTCAGAAGGCGGTTGCTCACCAACCAGTCAGTGTTGCTATTGAGGCTGGT GGCCGCGAGTTCCAGCTCTATCATTCGGGCGTCTTCAGCGGTAGGTGTGGCACAAGCCTT GACCATGGTGTGGTTGCCGTCGGTTATGGCACTGACAATGGCAAAGACTACTGGATTGTC CGCAACTCTTGGGGCCCGAAGTGGGGTGAGTCTGGATACGTTCGCATGGAGCGCAATATC AATGTGACCACGGGGAAGTGTGGCATTGCCATGATGGCATCATACCCTACCAAGAGCGGA GCAAACCCACCCAAGCCATCTCCGACTCCTCCAACTCCTCCAACACCACCTCCCCCATCC GCCCCTGACCATGTCTGCGATGATAACTTCTCTTGCCCAGCGGGCAGCACCTGCTGCTGC GCATTCGGCTTCAGGAATCTCTGCTTGGTTTGGGGCTGTTGCCCAGTTGAAGGTGCAACC TGCTGCAAGGATCATGCCAGCTGCTGCCCGCCTGACTACCCTGTCTGCAACACCCGGGCT GGAACCTGCTCAGCGAGCAAGAACAGCCCATTGAGCGTGAAGGCTTTGAAGCGCACGCTC GCTAAGCTGAACACCGCATGA

Peptide Sequence

PEP ID	Os04t0670200-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:34173356:34176732:-1 gene:Os04g0670200 transcript:Os04t0670200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Oryzain beta chain precursor (EC 3.4.22.-). (Os04t0670200-01);Granulin domain containing protein. (Os04t0670200-02)
Sequence	MAARAAAAAFLLLLIVGAATAAPDMSIISYNAEHGARGLEEGPTEAEARAAYDLWLAENG GGSPNALGGEHERRFLVFWDNLKFVDAHNARADERGGFRLGMNRFADLTNEEFRATFLGA KVAERSRAAGERYRHDGVEELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQL VTGEMITLSEQELVECSTNGQNSGCNGGLMDDAFDFIIKNGGIDTEDDYPYKAVDGKCDI NRENAKVVSIDGFEDVPQNDEKSLQKAVAHQPVSVAIEAGGREFQLYHSGVFSGRCGTSL DHGVVAVGYGTDNGKDYWIVRNSWGPKWGESGYVRMERNINVTTGKCGIAMMASYPTKSG ANPPKPSPTPPTPPTPPPPSAPDHVCDDNFSCPAGSTCCCAFGFRNLCLVWGCCPVEGAT CCKDHASCCPPDYPVCNTRAGTCSASKNSPLSVKALKRTLAKLNTA

Transcript Sequence

Transcript ID	Os04t0670200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:34173356:34176732:-1 gene:Os04g0670200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Oryzain beta chain precursor (EC 3.4.22.-). (Os04t0670200-01);Granulin domain containing protein. (Os04t0670200-02)
Sequence	CCAAAAAACCACAAACCCAACGAAGAAGGAAAAAAAAAGGAGGAAAAGAAAAGAGGAGGA AAGCGAAGAGGTTGGAGAGAGACGCTCGTCTCCACGTCGCCGCCATGGCCGCCCGCGCCG CCGCCGCCGCGTTCCTGCTGCTGCTCATCGTCGGCGCGGCCACCGCGGCGCCGGACATGT CGATCATCTCCTACAACGCGGAGCACGGGGCGCGGGGGCTGGAGGAGGGGCCCACGGAGG CCGAGGCGCGCGCCGCGTACGACCTCTGGCTCGCCGAGAACGGCGGCGGCTCGCCCAACG CGCTCGGCGGCGAGCACGAGCGCCGGTTCCTCGTGTTCTGGGACAACCTCAAGTTCGTCG ACGCCCACAACGCCCGCGCCGACGAGCGCGGCGGGTTCCGCCTCGGGATGAACCGCTTCG CCGATCTCACCAACGAGGAGTTCCGCGCGACCTTCCTCGGCGCCAAGGTCGCCGAGAGGA GCCGCGCCGCCGGGGAGAGGTACCGCCACGACGGGGTGGAGGAGCTGCCGGAGTCCGTCG ACTGGAGGGAGAAGGGCGCCGTCGCCCCCGTCAAGAACCAGGGCCAATGCGGAAGCTGCT GGGCCTTCTCCGCAGTAAGCACAGTAGAAAGCATCAACCAACTTGTTACTGGTGAGATGA TCACATTGTCGGAACAAGAACTTGTAGAATGCTCAACCAATGGACAGAACAGTGGCTGCA ACGGTGGGCTCATGGATGATGCCTTTGACTTCATCATTAAGAATGGAGGCATTGATACTG AAGATGACTATCCTTACAAAGCTGTAGATGGCAAGTGTGACATCAACAGGGAAAATGCTA AGGTTGTGAGCATCGATGGCTTTGAGGATGTACCTCAAAATGATGAGAAATCACTTCAGA AGGCGGTTGCTCACCAACCAGTCAGTGTTGCTATTGAGGCTGGTGGCCGCGAGTTCCAGC TCTATCATTCGGGCGTCTTCAGCGGTAGGTGTGGCACAAGCCTTGACCATGGTGTGGTTG CCGTCGGTTATGGCACTGACAATGGCAAAGACTACTGGATTGTCCGCAACTCTTGGGGCC CGAAGTGGGGTGAGTCTGGATACGTTCGCATGGAGCGCAATATCAATGTGACCACGGGGA AGTGTGGCATTGCCATGATGGCATCATACCCTACCAAGAGCGGAGCAAACCCACCCAAGC CATCTCCGACTCCTCCAACTCCTCCAACACCACCTCCCCCATCCGCCCCTGACCATGTCT GCGATGATAACTTCTCTTGCCCAGCGGGCAGCACCTGCTGCTGCGCATTCGGCTTCAGGA ATCTCTGCTTGGTTTGGGGCTGTTGCCCAGTTGAAGGTGCAACCTGCTGCAAGGATCATG CCAGCTGCTGCCCGCCTGACTACCCTGTCTGCAACACCCGGGCTGGAACCTGCTCAGCGA GCAAGAACAGCCCATTGAGCGTGAAGGCTTTGAAGCGCACGCTCGCTAAGCTGAACACCG CATGAGCTCATCGATAACATGTAATCGGCGAGGAGAGGGGATGAGGCAGCGTGGAGCCTT TCTGAAATTTCTGCTTCCGTGCCTCCATATATCGTTGTCGCATTTTGAGGGGACAGCTTA TTTACTCTACTGCCTGCCTTTTATCTTACAGTGATCTGTGTACATAGCTCGATCCAATTT GTACTCTTATTTATCTTCTCCAATTTGTACTCTATATAATTTATCATCTCAAGAATACAT TAACGAAGATCCTGTTTTACCGTTCC