Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0669900-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:34161628:34164342:-1 gene:Os04g0669900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Methylthioribose Kinase 2, MTR kinase 2 description:Similar to H0818H01.11 protein. (Os04t0669900-00)
Sequence

CAGCAGCAGCAGGGCTTCCGCCCGCTCGACGAGGCGTCCCTGGTGGCCTACATCAAGGCC
ACGCCCGCCCTCGCCGCGCGCCTCGGCGGCCGCCTCGACGCCCTCACCATCAAGGAGGTC
GGCGACGGCAACCTCAACTTCGTCTACATCGTCCTCTCCGACGCCGGCTCCCTCGTCATC
AAGCAGCAGGCGCTGCCGTACATCCGCTTAGTGGGGGATTCATGGCCGATGTCGAGGGAG
CGCGCCTATTTCGAGGCCTCCGCGCTGCAGAAGCACCGCGCCCTCTGCCCGGACCATGTC
CCCGAGGTCTACCACTTCGACCGTGCCATGTCGCTCATCGGGATGCGCTACATCGAGCCG
CCGCACATCATCCTCCGCAAGGGCCTCGTCGCCGGCGTCGAGTACCCGCTGCTCGCCGAG
CACATGGCGGATTACATGGCCAAGACGCTCTTCTTCACTTCACTTCTCTACAACTCCACC
ACTGATCACAAGAAAGGAGTTGCTCAGTATTGCGATAATGTGGAGATGAGCAGGCTCACA
GAACAAGTTGTATTCTCAGATCCATACAGGGTCGCCAAATACAATCGCTGCACATCACCC
TTCCTTGATAATGATGCTGCAGCGGTTCGAGAGGATGCTGAGCTTAAGTTGGAGATTGCT
GAATTAAAATCAATGTTTATTGAGAGAGCACAAGCTTTTCTTCATGGAGATCTCCACACT
AGTTCCATCATGGTGACACCAGATTCTACTCAAGTGATTGATCCAGAATTTGCTTTCTAT
GGCCCAATGGGTTACGATATTGGGGCCTTCCTGGGGAACTTGATTTTGGCATATTTTTCA
CAAGATGGACATGCTGATCAAGCAAATGATCGTAAGGCTTACAAGAAATGGATCTTGAAG
ACAATTGAAGATTCATGGAATTTTTTCCACAAGAAGTTTGTCGAATTATGGAATAAACAC
AAAGATGGGAATGGGGAAGCATACCTGCCCCCTATATACAACAGCTCAGAGCTTTTGAGC
CTTGTACAGAAGAAGTACATGACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCA
AAAATGATCAGGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGAT
GCCAGCAAGAGAGCTTCGTGTGAGCGACGTGCCCTTAATTGTGCAAAGGCAATCCTGAAG
GGAAGACGCCAGTTTGAAAGCATCGAGCAAGTGATTGTGCATGTACAATCGTTTGATCGG
GACTGA

Peptide Sequence

PEP ID

Os04t0669900-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:34161628:34164342:-1 gene:Os04g0669900 transcript:Os04t0669900-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Methylthioribose Kinase 2, MTR kinase 2 description:Similar to H0818H01.11 protein. (Os04t0669900-00)
Sequence

QQQQGFRPLDEASLVAYIKATPALAARLGGRLDALTIKEVGDGNLNFVYIVLSDAGSLVI
KQQALPYIRLVGDSWPMSRERAYFEASALQKHRALCPDHVPEVYHFDRAMSLIGMRYIEP
PHIILRKGLVAGVEYPLLAEHMADYMAKTLFFTSLLYNSTTDHKKGVAQYCDNVEMSRLT
EQVVFSDPYRVAKYNRCTSPFLDNDAAAVREDAELKLEIAELKSMFIERAQAFLHGDLHT
SSIMVTPDSTQVIDPEFAFYGPMGYDIGAFLGNLILAYFSQDGHADQANDRKAYKKWILK
TIEDSWNFFHKKFVELWNKHKDGNGEAYLPPIYNSSELLSLVQKKYMTSLFHDSLGFGSA
KMIRRIVGIAHVEDFESIEDASKRASCERRALNCAKAILKGRRQFESIEQVIVHVQSFDR
D

Transcript Sequence

Transcript ID

Os04t0669900-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:34161628:34164342:-1 gene:Os04g0669900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Methylthioribose Kinase 2, MTR kinase 2 description:Similar to H0818H01.11 protein. (Os04t0669900-00)
Sequence

AGCAGCAGCAGCAGGGCTTCCGCCCGCTCGACGAGGCGTCCCTGGTGGCCTACATCAAGG
CCACGCCCGCCCTCGCCGCGCGCCTCGGCGGCCGCCTCGACGCCCTCACCATCAAGGAGG
TCGGCGACGGCAACCTCAACTTCGTCTACATCGTCCTCTCCGACGCCGGCTCCCTCGTCA
TCAAGCAGCAGGCGCTGCCGTACATCCGCTTAGTGGGGGATTCATGGCCGATGTCGAGGG
AGCGCGCCTATTTCGAGGCCTCCGCGCTGCAGAAGCACCGCGCCCTCTGCCCGGACCATG
TCCCCGAGGTCTACCACTTCGACCGTGCCATGTCGCTCATCGGGATGCGCTACATCGAGC
CGCCGCACATCATCCTCCGCAAGGGCCTCGTCGCCGGCGTCGAGTACCCGCTGCTCGCCG
AGCACATGGCGGATTACATGGCCAAGACGCTCTTCTTCACTTCACTTCTCTACAACTCCA
CCACTGATCACAAGAAAGGAGTTGCTCAGTATTGCGATAATGTGGAGATGAGCAGGCTCA
CAGAACAAGTTGTATTCTCAGATCCATACAGGGTCGCCAAATACAATCGCTGCACATCAC
CCTTCCTTGATAATGATGCTGCAGCGGTTCGAGAGGATGCTGAGCTTAAGTTGGAGATTG
CTGAATTAAAATCAATGTTTATTGAGAGAGCACAAGCTTTTCTTCATGGAGATCTCCACA
CTAGTTCCATCATGGTGACACCAGATTCTACTCAAGTGATTGATCCAGAATTTGCTTTCT
ATGGCCCAATGGGTTACGATATTGGGGCCTTCCTGGGGAACTTGATTTTGGCATATTTTT
CACAAGATGGACATGCTGATCAAGCAAATGATCGTAAGGCTTACAAGAAATGGATCTTGA
AGACAATTGAAGATTCATGGAATTTTTTCCACAAGAAGTTTGTCGAATTATGGAATAAAC
ACAAAGATGGGAATGGGGAAGCATACCTGCCCCCTATATACAACAGCTCAGAGCTTTTGA
GCCTTGTACAGAAGAAGTACATGACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAG
CAAAAATGATCAGGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGG
ATGCCAGCAAGAGAGCTTCGTGTGAGCGACGTGCCCTTAATTGTGCAAAGGCAATCCTGA
AGGGAAGACGCCAGTTTGAAAGCATCGAGCAAGTGATTGTGCATGTACAATCGTTTGATC
GGGACTGATAAGGCTAACCATCTACACAACCTTTCTGATTGAGGAGACAAAAGTTTTCAT
CTGTTTACCATCAGCGATTATCTGTGCCTATTATAAAGCAGAATTGGCC