Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0669300-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:34138228:34142138:1 gene:Os04g0669300 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF hand domain containing protein. (Os04t0669300-01)
Sequence

ATGGGATCGGACTCGCCGCCCAAGAAATGGGGCCTCAGGGAGCAGCGCGAAGCCTACCTC
CGGTGGTTCTCCCTCGCCGACGACGATGGAGATGGGCGCGTGACGGGGAAAGACGCGCTC
AAGTTCTTCGCCATGTCGAATCTCTCCCGCCCCGAGCTGAAGCAGGTCTGGGCAATCGCT
GATTCCAAGCGTCAGGGTTATCTTGGATTCTCGGAGTTTATGACCGCAATGCAGCTGGTT
TCTCTTGCACAAGCTGGGAATGAGATTAGTCAGGACACCCTTGCACATGCAGATTTGGAG
ACGTTGCTACCTCCGACAATGGAAGGTCTGGACAAAAAACTAAAAAATAATTCTATGAGC
AAGAGCAACTCTGATATTGTCGTACGTCATCCGTCAGAATTGCCTGCATCAGCCAACTGG
TTTAACTCCAAGTCAGGAAAGAAGATTCCTTTAAGATCAGTTACTTCGATCATCGATGGG
TTAAAGAAATCTTACATTGAGAAGTTGAGGCCACTAGAAAAAACATATCAGTTCGATGAC
TTTGTTTCACCTTTGCTGACTAGCAGTGATTTCGATGCGAAGCCAATGGTCATGTTGCTG
GGTCAGTATTCCACAGGAAAAACCACATTCATAAAGCATTTACTGAAGACAAATTATCCA
GGTGCTCATATTGGTCCAGAGCCTACAACTGACAGATTTGTTGTTATTACTTCTGGACCT
GATGAAAGATGCATCCCTGGAAACACAATTGCCGTGCAAGCAGACATGCCATATAGTGGC
TTGTCATCTTTTGGGACAGCATTTCTATCAAAGTTTGAATGTTCTCAGATGCCTCATCCA
CTACTGGATCATATAACCTTTGTGGACACTCCTGGAGTTTTATCAGGGGAAAAGCAGCGA
ACACAGCGTAGCTATGACTTCACTGGAGTTACATCATGGTTTGCAGCCAAGTGTGACCTA
ATTCTTCTCCTATTTGATCCACATAAGCTTGACATCAGTGATGAGTTCAAGCGTGTAATT
GGGTCACTCAAAGGGCATGATGATAAAATACGTATAGTTCTGAACAAAGCAGACCAAGTT
GATGCACAACAACTCATGAGAGTCTATGGAGCACTGCTATGGTCGCTTGGGAAAGTTCTG
AACACACCAGAAGTCATGCGTGTGTACATAGGTTCATTTAACGACAAGCCCATTAGGGAG
ACAGTAGCTGGGCCACTGGGTAAAGAACTGTTTGAGAAAGAACAAGAAGACCTGCTCTCC
GACCTGAATGACATTCCAAAGAAAGCCTGTGACCGTCGAATCAACGAATTCGTGAAGCGT
TCGAGGTCAGCCAAGGTCCATGCTCACATAATCAGCCACCTGAAGAAGGAGATGCCGGCG
CTGATGGGCAAGGCCAAGGCGCAGCAGCGGCTGCTCGACACCCTCGACGAGCAGTTCGCC
AAGGTTCAGAAGGAGCTGCACTTGCCGGCCGGCGACTTCCCCAGCGTGGATGAGTACAGG
GAGACACTGAGCGCCTACAACTTCGACAAGTTCGAGAGGCTGAAGCCCAAGCTGGTGCAG
GGCGTCGACGACATGCTCGCCTACGACATCCCCGATCTCCTCAAGAGCTTCAGGAACCCC
TACGAATGA

Peptide Sequence

PEP ID

Os04t0669300-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:34138228:34142138:1 gene:Os04g0669300 transcript:Os04t0669300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF hand domain containing protein. (Os04t0669300-01)
Sequence

MGSDSPPKKWGLREQREAYLRWFSLADDDGDGRVTGKDALKFFAMSNLSRPELKQVWAIA
DSKRQGYLGFSEFMTAMQLVSLAQAGNEISQDTLAHADLETLLPPTMEGLDKKLKNNSMS
KSNSDIVVRHPSELPASANWFNSKSGKKIPLRSVTSIIDGLKKSYIEKLRPLEKTYQFDD
FVSPLLTSSDFDAKPMVMLLGQYSTGKTTFIKHLLKTNYPGAHIGPEPTTDRFVVITSGP
DERCIPGNTIAVQADMPYSGLSSFGTAFLSKFECSQMPHPLLDHITFVDTPGVLSGEKQR
TQRSYDFTGVTSWFAAKCDLILLLFDPHKLDISDEFKRVIGSLKGHDDKIRIVLNKADQV
DAQQLMRVYGALLWSLGKVLNTPEVMRVYIGSFNDKPIRETVAGPLGKELFEKEQEDLLS
DLNDIPKKACDRRINEFVKRSRSAKVHAHIISHLKKEMPALMGKAKAQQRLLDTLDEQFA
KVQKELHLPAGDFPSVDEYRETLSAYNFDKFERLKPKLVQGVDDMLAYDIPDLLKSFRNP
YE

Transcript Sequence

Transcript ID

Os04t0669300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:34138228:34142138:1 gene:Os04g0669300 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF hand domain containing protein. (Os04t0669300-01)
Sequence

GCGCGGCAATCGGGGCATTCGCCAGCCACACCTCTCTCCATCCTCTCGTTCTCTCTCTGT
CTCCTCTTCTCTCTCCCCCGACGGAGAGGAGAGAAGGCGAGGAGCCGGGGGAGATGGGAT
CGGACTCGCCGCCCAAGAAATGGGGCCTCAGGGAGCAGCGCGAAGCCTACCTCCGGTGGT
TCTCCCTCGCCGACGACGATGGAGATGGGCGCGTGACGGGGAAAGACGCGCTCAAGTTCT
TCGCCATGTCGAATCTCTCCCGCCCCGAGCTGAAGCAGGTCTGGGCAATCGCTGATTCCA
AGCGTCAGGGTTATCTTGGATTCTCGGAGTTTATGACCGCAATGCAGCTGGTTTCTCTTG
CACAAGCTGGGAATGAGATTAGTCAGGACACCCTTGCACATGCAGATTTGGAGACGTTGC
TACCTCCGACAATGGAAGGTCTGGACAAAAAACTAAAAAATAATTCTATGAGCAAGAGCA
ACTCTGATATTGTCGTACGTCATCCGTCAGAATTGCCTGCATCAGCCAACTGGTTTAACT
CCAAGTCAGGAAAGAAGATTCCTTTAAGATCAGTTACTTCGATCATCGATGGGTTAAAGA
AATCTTACATTGAGAAGTTGAGGCCACTAGAAAAAACATATCAGTTCGATGACTTTGTTT
CACCTTTGCTGACTAGCAGTGATTTCGATGCGAAGCCAATGGTCATGTTGCTGGGTCAGT
ATTCCACAGGAAAAACCACATTCATAAAGCATTTACTGAAGACAAATTATCCAGGTGCTC
ATATTGGTCCAGAGCCTACAACTGACAGATTTGTTGTTATTACTTCTGGACCTGATGAAA
GATGCATCCCTGGAAACACAATTGCCGTGCAAGCAGACATGCCATATAGTGGCTTGTCAT
CTTTTGGGACAGCATTTCTATCAAAGTTTGAATGTTCTCAGATGCCTCATCCACTACTGG
ATCATATAACCTTTGTGGACACTCCTGGAGTTTTATCAGGGGAAAAGCAGCGAACACAGC
GTAGCTATGACTTCACTGGAGTTACATCATGGTTTGCAGCCAAGTGTGACCTAATTCTTC
TCCTATTTGATCCACATAAGCTTGACATCAGTGATGAGTTCAAGCGTGTAATTGGGTCAC
TCAAAGGGCATGATGATAAAATACGTATAGTTCTGAACAAAGCAGACCAAGTTGATGCAC
AACAACTCATGAGAGTCTATGGAGCACTGCTATGGTCGCTTGGGAAAGTTCTGAACACAC
CAGAAGTCATGCGTGTGTACATAGGTTCATTTAACGACAAGCCCATTAGGGAGACAGTAG
CTGGGCCACTGGGTAAAGAACTGTTTGAGAAAGAACAAGAAGACCTGCTCTCCGACCTGA
ATGACATTCCAAAGAAAGCCTGTGACCGTCGAATCAACGAATTCGTGAAGCGTTCGAGGT
CAGCCAAGGTCCATGCTCACATAATCAGCCACCTGAAGAAGGAGATGCCGGCGCTGATGG
GCAAGGCCAAGGCGCAGCAGCGGCTGCTCGACACCCTCGACGAGCAGTTCGCCAAGGTTC
AGAAGGAGCTGCACTTGCCGGCCGGCGACTTCCCCAGCGTGGATGAGTACAGGGAGACAC
TGAGCGCCTACAACTTCGACAAGTTCGAGAGGCTGAAGCCCAAGCTGGTGCAGGGCGTCG
ACGACATGCTCGCCTACGACATCCCCGATCTCCTCAAGAGCTTCAGGAACCCCTACGAAT
GAATGAGCAAGCAGCAGCAGTCAGAGAAGGCGTGTTCGACCACAATACAAGCATGGATCT
TTCTTGTTCACAAAAAAAGAATGTGATCCGTGAATCGTCAATCCATCTCTTTTGTGCTCC
ACGAAGGCGCGATATATGGCTTTTTGTTGGCGATTTTCTTCAGTCTTCTGCAGTGATCTC
TGAAGAAGGCAGTGTGACAGGAATGTGCAAAGTGAAGCCGATTGGAAAGTTTGGAACAGC
GTTAAACTGGGCTTGGGCT