Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0668900-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:34122909:34125915:-1 gene:Os04g0668900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OSIMASE description:Protein similar to plastid terminal oxidase, Carotenoid and strigolactone synthesis (Os04t0668900-01)
Sequence	ATGGCGGCGGTCGCCTCCGCCTCCCCGCTCCCCGCCGCGGCGGCGCCCTCCACCCGCTGC TCGCCGCCGCCCGCCTTCCTCCCTCTCCGTGCGCACCGCCCCCGCGTCGGCACCGTCGCC ACCAGGAGGGTTTTCCGCGCGGAGGCGATGAGGACGCAGCGGGAGAAGGAGCAGACCGAG GTGGCCGTCGAGGAGTCCTTCCCCTTCAGGGAGACGGCTCCTCCTGACGAGCCACTGGTC ACCGCCGAGGAGAGCTGGGTGGTTAAGCTCGAGCAGTCCGTGAACATTTTCCTCACGGAG TCAGTCATCACGATACTTGATGGATTGTACCGTGACCGCAACTACGCTAGATTTTTCGTA TTGGAGACGATTGCTAGGGTGCCGTATTTTGCGTTTATCTCGGTGCTTCACATGTATGAA ACCTTTGGCTGGTGGAGGAGAGCCGATTATATAAAGGTGCACTTTGCTGAGAGCTGGAAT GAGTTCCATCACCTCTTAATCATGGAAGAATTGGGTGGCAACTCTTTATGGGTTGATCGT TTTCTTGCACGGTTTGCTGCATTTTTTTACTACTTCATGACTGTTGCGATGTACATGGTG AGCCCAAGAATGGCATACCATTTTTCTGAATGTGTTGAGAGGCATGCGTACTCAACCTAT GACAAGTTTATTAAGCTCCATGAAGATGAGTTGAAAAAGCTACCAGCTCCCGAGGCGGCT TTAAACTATTACCTGAATGAGGATCTTTACTTATTCGATGAATTTCAAACAGCAAGAGTC CCATGTTCTAGGAGACCTAAAATTGATAACTTGTATGATGTATTTGTCAATATACGAGAT GATGAGGCAGAACATTGCAAGACGATGAAGGCCTGTCAAACACATGGAAACCTTCGTTCT CCTCACTCTATGCAGAAATGCTTAGAAACTGACACCGAGTGTGTAATACCTGAAGATGAC TGTGAAGGTATCGTGGATTGTGTCAAAAAATCTCTTGTGAGTAAAGAGTGA

Peptide Sequence

PEP ID	Os04t0668900-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:34122909:34125915:-1 gene:Os04g0668900 transcript:Os04t0668900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OSIMASE description:Protein similar to plastid terminal oxidase, Carotenoid and strigolactone synthesis (Os04t0668900-01)
Sequence	MAAVASASPLPAAAAPSTRCSPPPAFLPLRAHRPRVGTVATRRVFRAEAMRTQREKEQTE VAVEESFPFRETAPPDEPLVTAEESWVVKLEQSVNIFLTESVITILDGLYRDRNYARFFV LETIARVPYFAFISVLHMYETFGWWRRADYIKVHFAESWNEFHHLLIMEELGGNSLWVDR FLARFAAFFYYFMTVAMYMVSPRMAYHFSECVERHAYSTYDKFIKLHEDELKKLPAPEAA LNYYLNEDLYLFDEFQTARVPCSRRPKIDNLYDVFVNIRDDEAEHCKTMKACQTHGNLRS PHSMQKCLETDTECVIPEDDCEGIVDCVKKSLVSKE

Transcript Sequence

Transcript ID	Os04t0668900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:34122909:34125915:-1 gene:Os04g0668900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OSIMASE description:Protein similar to plastid terminal oxidase, Carotenoid and strigolactone synthesis (Os04t0668900-01)
Sequence	CGGTTCTTCCCTCTTCCCATTTCCGCGCGGCGCAACACCTTCTGGACGTCGGCATGGCGG CGGTCGCCTCCGCCTCCCCGCTCCCCGCCGCGGCGGCGCCCTCCACCCGCTGCTCGCCGC CGCCCGCCTTCCTCCCTCTCCGTGCGCACCGCCCCCGCGTCGGCACCGTCGCCACCAGGA GGGTTTTCCGCGCGGAGGCGATGAGGACGCAGCGGGAGAAGGAGCAGACCGAGGTGGCCG TCGAGGAGTCCTTCCCCTTCAGGGAGACGGCTCCTCCTGACGAGCCACTGGTCACCGCCG AGGAGAGCTGGGTGGTTAAGCTCGAGCAGTCCGTGAACATTTTCCTCACGGAGTCAGTCA TCACGATACTTGATGGATTGTACCGTGACCGCAACTACGCTAGATTTTTCGTATTGGAGA CGATTGCTAGGGTGCCGTATTTTGCGTTTATCTCGGTGCTTCACATGTATGAAACCTTTG GCTGGTGGAGGAGAGCCGATTATATAAAGGTGCACTTTGCTGAGAGCTGGAATGAGTTCC ATCACCTCTTAATCATGGAAGAATTGGGTGGCAACTCTTTATGGGTTGATCGTTTTCTTG CACGGTTTGCTGCATTTTTTTACTACTTCATGACTGTTGCGATGTACATGGTGAGCCCAA GAATGGCATACCATTTTTCTGAATGTGTTGAGAGGCATGCGTACTCAACCTATGACAAGT TTATTAAGCTCCATGAAGATGAGTTGAAAAAGCTACCAGCTCCCGAGGCGGCTTTAAACT ATTACCTGAATGAGGATCTTTACTTATTCGATGAATTTCAAACAGCAAGAGTCCCATGTT CTAGGAGACCTAAAATTGATAACTTGTATGATGTATTTGTCAATATACGAGATGATGAGG CAGAACATTGCAAGACGATGAAGGCCTGTCAAACACATGGAAACCTTCGTTCTCCTCACT CTATGCAGAAATGCTTAGAAACTGACACCGAGTGTGTAATACCTGAAGATGACTGTGAAG GTATCGTGGATTGTGTCAAAAAATCTCTTGTGAGTAAAGAGTGACTGATCCTAATTGGAA TGGAGTGCGTCATAGTCTCATAGAATAGAGTTTTGATAACAGTCGGTTTCCTTTTTTCTT TCAAAAGATAGGGACCACTATAATCTTAACATTCTTGATAATCCTTCAGAATAGGCTAGC TGTATCACAATAAAAATAATATATTCATGAGATAGATGTTACTGCAAGTTGTGAAGCCCT ACAAAATTTGCAATCTTGATGTGCTGTGGTTCTATGGAAAGTTCGGTTGCTTGCTGCTTC TTAAGTTCACAAAGCTGCTCTGTAAGGGAAATGGAGATGGCTCATGATCAGGCAGCATAC GGTGAATATGGTCAGCTCAAGGTGGAACTGACTCAAACCGTAGAATTTCGTGAAGATGAG AAGGAAGCTCACTGCAGTATCGAAGAAGTCAATGCGAAATGAAAAATCAATCATACTGCT GCTTTGTTTTTTCTGAAGATTTATTTGTCATTTATTCAGTGTACAGATGATACTATTACA TCTCAGGCAAATTACTGT