Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0667200-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:34060040:34063474:1 gene:Os04g0667200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FLAVANONE 3-HYDROXYLASE 3 description:Similar to H1005F08.24 protein. (Os04t0667200-01)
Sequence

ATGTCTGACACGTCGAAGGGTATCCCTCAAGAGCAGCTGCCATCACAGGAGCTCCACCCG
CCGCCAATGCCAGTGATCAACCTTGGCCACCTCAGTCTTGATGATCCCACGGTGCGGTCC
CGGGTGGTCAACGATATCGCCAAAGCATGCCGTGATCTGGGATACTTCCAGGTTATAAGT
CATGGGATCAGTCAATCAGTCATGGATGGTGCTATTGAAGCTGCTTCAGAATTCTTCAAA
CTGCCAAATGAGATAAAGAAAGAGTATGCATCAGATGATATCCGGCAACCTGTTAGATAC
GATACCAGCTCAAAGGATGGCATTAGTATGTCTCGGGCATTCCTGAAGCATTATGCCCAT
CCCCTCTGCGATTGGCTGCAATACTGGCCACAGCAACCACCAATATATAGGGAATACATG
GCAAAATATGCCGTAGAAGTAAGGGTGGTGGCTCTGAAACTGATGGAAGCAATTCTAGAA
GGCCTAGGCATTGGCAAGGAATACATGCAAGAGAAATTTGAGGAAGGCTTACAGCTATTG
TCAGTGAATTGCTACCCTAAAGTGTCTCAAAGTGATACGTCAATAGGTCTGGCAGCACAT
TCTGATTATGGGCTCCTAACCATCTTGCTCACAAGTTGTCAGGGCCTTGAGGTTGTTGAC
CGCAGCAGCAACAGCTGGAAAGTGGTCCAGCAACTCCCACATGCATTGCATGTCCATGTA
GGAGACCACATGGAAGTTCTAAGCAATGGCCGAATCAAGACTGTTGTGCACCGCGCTGTT
CTGAATCCTCAAGAAGCAAGGATTTCTCTCGCTAGCATTCATGGTTTTGCACTGCATGAG
AAGGTCTCCAGTGCCAAAGAGCTGGTCGACGAGGAAAATCCACAAAAGTACAAAGAAAAC
AGCTTTAATGACTTCCTAGAGCATCTCACTGCCAATATGGACAACAGGCAAAGGAACTTT
CTTGAGAGCCTTAGAATGTAA

Peptide Sequence

PEP ID

Os04t0667200-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:34060040:34063474:1 gene:Os04g0667200 transcript:Os04t0667200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FLAVANONE 3-HYDROXYLASE 3 description:Similar to H1005F08.24 protein. (Os04t0667200-01)
Sequence

MSDTSKGIPQEQLPSQELHPPPMPVINLGHLSLDDPTVRSRVVNDIAKACRDLGYFQVIS
HGISQSVMDGAIEAASEFFKLPNEIKKEYASDDIRQPVRYDTSSKDGISMSRAFLKHYAH
PLCDWLQYWPQQPPIYREYMAKYAVEVRVVALKLMEAILEGLGIGKEYMQEKFEEGLQLL
SVNCYPKVSQSDTSIGLAAHSDYGLLTILLTSCQGLEVVDRSSNSWKVVQQLPHALHVHV
GDHMEVLSNGRIKTVVHRAVLNPQEARISLASIHGFALHEKVSSAKELVDEENPQKYKEN
SFNDFLEHLTANMDNRQRNFLESLRM

Transcript Sequence

Transcript ID

Os04t0667200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:34060040:34063474:1 gene:Os04g0667200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FLAVANONE 3-HYDROXYLASE 3 description:Similar to H1005F08.24 protein. (Os04t0667200-01)
Sequence

GCGTACAGTTCTAATTCTGCATAACCAATTGGCGTACCTGAGCTGCGTGTGGCTTCTTCG
CTGATCAACAATGTCTGACACGTCGAAGGGTATCCCTCAAGAGCAGCTGCCATCACAGGA
GCTCCACCCGCCGCCAATGCCAGTGATCAACCTTGGCCACCTCAGTCTTGATGATCCCAC
GGTGCGGTCCCGGGTGGTCAACGATATCGCCAAAGCATGCCGTGATCTGGGATACTTCCA
GGTTATAAGTCATGGGATCAGTCAATCAGTCATGGATGGTGCTATTGAAGCTGCTTCAGA
ATTCTTCAAACTGCCAAATGAGATAAAGAAAGAGTATGCATCAGATGATATCCGGCAACC
TGTTAGATACGATACCAGCTCAAAGGATGGCATTAGTATGTCTCGGGCATTCCTGAAGCA
TTATGCCCATCCCCTCTGCGATTGGCTGCAATACTGGCCACAGCAACCACCAATATATAG
GGAATACATGGCAAAATATGCCGTAGAAGTAAGGGTGGTGGCTCTGAAACTGATGGAAGC
AATTCTAGAAGGCCTAGGCATTGGCAAGGAATACATGCAAGAGAAATTTGAGGAAGGCTT
ACAGCTATTGTCAGTGAATTGCTACCCTAAAGTGTCTCAAAGTGATACGTCAATAGGTCT
GGCAGCACATTCTGATTATGGGCTCCTAACCATCTTGCTCACAAGTTGTCAGGGCCTTGA
GGTTGTTGACCGCAGCAGCAACAGCTGGAAAGTGGTCCAGCAACTCCCACATGCATTGCA
TGTCCATGTAGGAGACCACATGGAAGTTCTAAGCAATGGCCGAATCAAGACTGTTGTGCA
CCGCGCTGTTCTGAATCCTCAAGAAGCAAGGATTTCTCTCGCTAGCATTCATGGTTTTGC
ACTGCATGAGAAGGTCTCCAGTGCCAAAGAGCTGGTCGACGAGGAAAATCCACAAAAGTA
CAAAGAAAACAGCTTTAATGACTTCCTAGAGCATCTCACTGCCAATATGGACAACAGGCA
AAGGAACTTTCTTGAGAGCCTTAGAATGTAAGGGGCACATTCACGGCCAATTGGTTCTAT
GGTATTGAGAAGCAGATCAAGCTAAAGTTTATCTTGGCATGTTGAAATCCTAAGCATCAT
CATCATCATCATCATCATCATCATCATCATCATCAATACAAGCCATATCTTGGCTGCCAG
GTGTCCATTTCCAGTCTAATAAGAGTCAGTTGGTTTTTCTTTCAGAGAAACGCATGTAAT
TATCTTTAGCCATCATCTACAACTTTTAGGATCGAATATATTTCAAAATTTAAAGTGCAT
GTGTGGTTTACATGTCCCAATGTGTAATTCCATTATATATATTAAGCATGCCATTTAC