Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0666900-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:34040123:34048308:-1 gene:Os04g0666900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H1005F08.22 protein. (Os04t0666900-01);Similar to H1005F08.22 protein. (Os04t0666900-02)
Sequence	GTAGAGGGCTTTCTGAAGGCAATGCAAAAACAGATCCATTCAGCTGGAAAACGTGGTTTT TTTTCGAAGAAATCTGTGGGACCACATGTTCGTGAAAAGTTCACCTTGGAAGATATGTTG TGCTTCCAAAAGGATCCTATTCCAACGTCATTGCTAAAAATAAGTAGTGACCTTGTAAGC CGTTCAATTAAGTTATTCCATGTCATACTGAAGTACATGGGCATCGATTCCCCAGCAATA ATAAGTTTGGATGAAAGAATTGAACTTGTTGCAAAGCTTTACAAGCATACTTTGAAACGT TCTGAACTGAGAGATGAGCTCTTTGCACAGATTTCAAAACAAACACGTAACAATCCCGAC AGGGCTTGGTTAATAAGAGCTTGGGAGCTTATGTATTTATGTGCGTCATCCATGCCACCA AGCAAAGATATTGGAGCATACTTGTCTGAGTATGTTCACTACATTGCTCATGGCGCTACA ACTGATTCTGATGTTCGAGTTCTAGCACTTAACACACTAAATGCACTGAAACGCTCAGTT AAGGCAGGCCCTAGGGTTACAATTCCTGCACGGGAGGAGATAGAGGCTCTTTTATCCAGC CGTAAGCTTACAACAATTGTTTTTTTCTTGGATGAAACTTTTGAAGAGATCACATATGAC ATGGCAACAACTGTTGCTGATGCTGTTGAGGAACTTGCTGGCATTATCAAACTTTCAGTA TATTCTAGTTTCAGCCTTTTTGAATGCCGAAAGGTTGTTAATGGATCCAAGTCTTCAGAT GTTGGCAATGAGGAGTACATTGGTTTAGATGATAACAAATATATTGGTGACCTCCTATCT GAATTCAAGGCAGCCAAGGATCGGAACAAAGGAGAAATTTTACACTGCAAACTTGTATTT AAAAAACGCCTCTTCCGTGAGTCCGATGAGGCTATAACTGATCCAATGTTTGTTCAGCTA TCTTATGTCCAGTTACAACATGATTATATTTTAGGAAACTATCCAGTAGGTAGGGATGAT GCTGCACAGCTATCTGCTCTGCAAATATTGGTCGAAATTGGCTTTGTTGACAATCCTGAG TCTTGTGTTGAATGGATATCTCTTTTAGAGAGATTTCTACCCAGACAAGTTGCAATTACA AGAGCAAAGCGAGACTGGGAGCTTGACATTGTCTCACGCTATCAGTTAATGGAACATCTG TCAAAAGATGATGCAAGGCAACAGTTTCTCAGAATCTTAAGGACTCTTCCATATGGGAAC TCAGTTTTCTTCAGTGTCCGGAAGATTGATGATCCAATAGGACTTTTACCTGGAAGAATC ATTCTGGGAATAAACAAACGAGGGGTTCATTTTTTCCGTCCGGTTCCCAAGGAATATCTT CATTCTGCAGAACTGAGAGATATCATGCAATTTGGGAGCAGCAATACCGCTGTTTTCTTT AAAATGAGAGTCGCTGGTGTTCTTCATATCTTTCAGTTTGAAACTAAGCAGGGCGAGGAA ATATGTGTAGCACTTCAGACGCATATCAATGATGTGATGCTCCGCAGATATTCAAAAGCA CGCTCTGCTACTAGCGCGGTTTCTCAAAACGATGTTTCTCAAACATATAAACCACCGAAT ATTGAAATATATGAGAAACGTGTCCAAGAACTGTCAAAAGCAGTTGAGGAATCTGAAAGG AAAGCAGATCTGTTGAATGAGGAGTTACAGAAGAAGACAAAACAAGAAAGAGATATGCAA AAAGAATTAGAAGGTCTGAGGGATACCTTGCAATCTGAACGGCAAAGCATTAAAGAAGTA ACAAATGATCTTGATAAACTAAAATCCCTTTGTGATGAAAAGGACTCCTCTTTGCAGGCT TCACTGATGGAGAAAACTAGACTGGAGACCAGATTAAAAAGTGGTCAGGGCCAAGAAAGC AGTAATAGAACAGGAGTATCAGGAAATCATTTTGAGAGAGATACTCTCCCAACTGTAGGC ACTGTCAATAATAGCATTGAGATGTTAGCAAAGCTTGAGGAGGAGTTAAAATCCTGTAAG AAGGAGCTTGATGCATCCAAGGAATTATCAAAGAAATTAACAATGGAAAATAATCTGCTT GACCAGAAGGTTCAAAGGCTTGAAAGAGCAAAAAGTGAAGAGAAAAGTAATATGGAAAGA GTTTATGAGGATGAATGTTGCAAGCTGAAATCTCGTATTGCTGAATTGGAGCAAAAACTG GAAAGCAGAACACGTTCCCTGAATGTTACTGAATCGACTCTTGCCTTAAGAAATGCTGAG GTGGATACATTGCAAAACAGTCTCAAAGAACTTGACGAGTTACGAGAGTTCAAAGCGGAT GTGGACAGAAAAAACCAACAGACTGCTGAGATTCTTAAAAGGCAAGGAGCACAATTGATT GAGCTTGAAAATCTTTATAAGCAAGAGCAGGTTCTGAGAAAGCGTTATTATAACACAATT GAAGATATGAAGGGAAAAATAAGAGTTTTTTGTCGTCTGCGTCCTCTAAATGATAAGGAG CTCATTGAAAAGGACAAGAATATTGTTTGCAGCCCTGATGAGTTTACAGTTGCACATCCA TGGAAAGATGACAAGTCAAAACAACATATATATGACCGTGTTTTTGATGCTAACACTACC CAAGAAGAAGTATTTGAGGACACGAAGTATCTAGTTCAATCGGCCGTTGATGGATATAAT GTTTGTATATTTGCTTATGGGCAAACTGGTTCTGGAAAAACTTTTACAATTTATGGATCT GAAAACAATCCTGGTCTTACCCCAAGGGCTACCTCTGAACTTTTTAGGGTGATAAAGCGT GATGGTCACAAATATTCATTTTCTTTGAAGGCATATATGGTTGAGCTTTATCAGGATAAT CTTGTGGACCTGTTGTTGGCCAAAAACGCAACACACCAAAAATTGGAAATAAAAAAGGAT TCCAAGGGGGTTGTTACTGTTGAAAATGTGACAGTTGTGAACATTTCAAGTTTTGAAGAA CTGAGGGCTATAATTTTAAGAGGTTCCGAGAGAAGACACACCGCTGGAACAAATATGAAT GTTGAGAGCTCAAGGTCTCATTTAATTCTTTCAATCATTATTGAAAGTACCAACCTCCAG ACTCAATCTTATGCAAGAGGAAAGCTAAGTTTCGTGGACCTTGCTGGTTCTGAGAGGGTG AAAAAGTCCGGCTCAGCAGGAAAACAACTGAAAGAAGCTCAAAGCATCAATAAGTCTCTT TCTGCATTGGCTGATGTGATTGGGGCTTTATCTTCTGATGGACAACATATACCTTATCGG AACCATAAGTTGACAATGCTGATGAGTGATTCTCTTGGAGGCAATGCGAAAACCTTGATG TTTGTGAATGTCTCACCAGCAGAGTCCAACCTGGAGGAGACTTACAATTCACTCATGTAT GCTTCACGAGTGCGTTGCATTGTCAATGATACGAGCAAGCATGTTGCCCCAAAGGAAATC ATGAGGTTGAAGAAGTTAATTGCTTATTGGAAGGAGCAAGCTGGCAAGCGTAGTGAAGAC GACGACCTGGAGGAAATACAGGAAGAGAGGACACCAAAGGAGAAAGCAGATAATCGCTTG ACTAGCTGA

Peptide Sequence

PEP ID	Os04t0666900-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:34040123:34048308:-1 gene:Os04g0666900 transcript:Os04t0666900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H1005F08.22 protein. (Os04t0666900-01);Similar to H1005F08.22 protein. (Os04t0666900-02)
Sequence	VEGFLKAMQKQIHSAGKRGFFSKKSVGPHVREKFTLEDMLCFQKDPIPTSLLKISSDLVS RSIKLFHVILKYMGIDSPAIISLDERIELVAKLYKHTLKRSELRDELFAQISKQTRNNPD RAWLIRAWELMYLCASSMPPSKDIGAYLSEYVHYIAHGATTDSDVRVLALNTLNALKRSV KAGPRVTIPAREEIEALLSSRKLTTIVFFLDETFEEITYDMATTVADAVEELAGIIKLSV YSSFSLFECRKVVNGSKSSDVGNEEYIGLDDNKYIGDLLSEFKAAKDRNKGEILHCKLVF KKRLFRESDEAITDPMFVQLSYVQLQHDYILGNYPVGRDDAAQLSALQILVEIGFVDNPE SCVEWISLLERFLPRQVAITRAKRDWELDIVSRYQLMEHLSKDDARQQFLRILRTLPYGN SVFFSVRKIDDPIGLLPGRIILGINKRGVHFFRPVPKEYLHSAELRDIMQFGSSNTAVFF KMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSATSAVSQNDVSQTYKPPN IEIYEKRVQELSKAVEESERKADLLNEELQKKTKQERDMQKELEGLRDTLQSERQSIKEV TNDLDKLKSLCDEKDSSLQASLMEKTRLETRLKSGQGQESSNRTGVSGNHFERDTLPTVG TVNNSIEMLAKLEEELKSCKKELDASKELSKKLTMENNLLDQKVQRLERAKSEEKSNMER VYEDECCKLKSRIAELEQKLESRTRSLNVTESTLALRNAEVDTLQNSLKELDELREFKAD VDRKNQQTAEILKRQGAQLIELENLYKQEQVLRKRYYNTIEDMKGKIRVFCRLRPLNDKE LIEKDKNIVCSPDEFTVAHPWKDDKSKQHIYDRVFDANTTQEEVFEDTKYLVQSAVDGYN VCIFAYGQTGSGKTFTIYGSENNPGLTPRATSELFRVIKRDGHKYSFSLKAYMVELYQDN LVDLLLAKNATHQKLEIKKDSKGVVTVENVTVVNISSFEELRAIILRGSERRHTAGTNMN VESSRSHLILSIIIESTNLQTQSYARGKLSFVDLAGSERVKKSGSAGKQLKEAQSINKSL SALADVIGALSSDGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLEETYNSLMY ASRVRCIVNDTSKHVAPKEIMRLKKLIAYWKEQAGKRSEDDDLEEIQEERTPKEKADNRL TS

Transcript Sequence

Transcript ID	Os04t0666900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:34040123:34048308:-1 gene:Os04g0666900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H1005F08.22 protein. (Os04t0666900-01);Similar to H1005F08.22 protein. (Os04t0666900-02)
Sequence	GGTAGAGGGCTTTCTGAAGGCAATGCAAAAACAGATCCATTCAGCTGGAAAACGTGGTTT TTTTTCGAAGAAATCTGTGGGACCACATGTTCGTGAAAAGTTCACCTTGGAAGATATGTT GTGCTTCCAAAAGGATCCTATTCCAACGTCATTGCTAAAAATAAGTAGTGACCTTGTAAG CCGTTCAATTAAGTTATTCCATGTCATACTGAAGTACATGGGCATCGATTCCCCAGCAAT AATAAGTTTGGATGAAAGAATTGAACTTGTTGCAAAGCTTTACAAGCATACTTTGAAACG TTCTGAACTGAGAGATGAGCTCTTTGCACAGATTTCAAAACAAACACGTAACAATCCCGA CAGGGCTTGGTTAATAAGAGCTTGGGAGCTTATGTATTTATGTGCGTCATCCATGCCACC AAGCAAAGATATTGGAGCATACTTGTCTGAGTATGTTCACTACATTGCTCATGGCGCTAC AACTGATTCTGATGTTCGAGTTCTAGCACTTAACACACTAAATGCACTGAAACGCTCAGT TAAGGCAGGCCCTAGGGTTACAATTCCTGCACGGGAGGAGATAGAGGCTCTTTTATCCAG CCGTAAGCTTACAACAATTGTTTTTTTCTTGGATGAAACTTTTGAAGAGATCACATATGA CATGGCAACAACTGTTGCTGATGCTGTTGAGGAACTTGCTGGCATTATCAAACTTTCAGT ATATTCTAGTTTCAGCCTTTTTGAATGCCGAAAGGTTGTTAATGGATCCAAGTCTTCAGA TGTTGGCAATGAGGAGTACATTGGTTTAGATGATAACAAATATATTGGTGACCTCCTATC TGAATTCAAGGCAGCCAAGGATCGGAACAAAGGAGAAATTTTACACTGCAAACTTGTATT TAAAAAACGCCTCTTCCGTGAGTCCGATGAGGCTATAACTGATCCAATGTTTGTTCAGCT ATCTTATGTCCAGTTACAACATGATTATATTTTAGGAAACTATCCAGTAGGTAGGGATGA TGCTGCACAGCTATCTGCTCTGCAAATATTGGTCGAAATTGGCTTTGTTGACAATCCTGA GTCTTGTGTTGAATGGATATCTCTTTTAGAGAGATTTCTACCCAGACAAGTTGCAATTAC AAGAGCAAAGCGAGACTGGGAGCTTGACATTGTCTCACGCTATCAGTTAATGGAACATCT GTCAAAAGATGATGCAAGGCAACAGTTTCTCAGAATCTTAAGGACTCTTCCATATGGGAA CTCAGTTTTCTTCAGTGTCCGGAAGATTGATGATCCAATAGGACTTTTACCTGGAAGAAT CATTCTGGGAATAAACAAACGAGGGGTTCATTTTTTCCGTCCGGTTCCCAAGGAATATCT TCATTCTGCAGAACTGAGAGATATCATGCAATTTGGGAGCAGCAATACCGCTGTTTTCTT TAAAATGAGAGTCGCTGGTGTTCTTCATATCTTTCAGTTTGAAACTAAGCAGGGCGAGGA AATATGTGTAGCACTTCAGACGCATATCAATGATGTGATGCTCCGCAGATATTCAAAAGC ACGCTCTGCTACTAGCGCGGTTTCTCAAAACGATGTTTCTCAAACATATAAACCACCGAA TATTGAAATATATGAGAAACGTGTCCAAGAACTGTCAAAAGCAGTTGAGGAATCTGAAAG GAAAGCAGATCTGTTGAATGAGGAGTTACAGAAGAAGACAAAACAAGAAAGAGATATGCA AAAAGAATTAGAAGGTCTGAGGGATACCTTGCAATCTGAACGGCAAAGCATTAAAGAAGT AACAAATGATCTTGATAAACTAAAATCCCTTTGTGATGAAAAGGACTCCTCTTTGCAGGC TTCACTGATGGAGAAAACTAGACTGGAGACCAGATTAAAAAGTGGTCAGGGCCAAGAAAG CAGTAATAGAACAGGAGTATCAGGAAATCATTTTGAGAGAGATACTCTCCCAACTGTAGG CACTGTCAATAATAGCATTGAGATGTTAGCAAAGCTTGAGGAGGAGTTAAAATCCTGTAA GAAGGAGCTTGATGCATCCAAGGAATTATCAAAGAAATTAACAATGGAAAATAATCTGCT TGACCAGAAGGTTCAAAGGCTTGAAAGAGCAAAAAGTGAAGAGAAAAGTAATATGGAAAG AGTTTATGAGGATGAATGTTGCAAGCTGAAATCTCGTATTGCTGAATTGGAGCAAAAACT GGAAAGCAGAACACGTTCCCTGAATGTTACTGAATCGACTCTTGCCTTAAGAAATGCTGA GGTGGATACATTGCAAAACAGTCTCAAAGAACTTGACGAGTTACGAGAGTTCAAAGCGGA TGTGGACAGAAAAAACCAACAGACTGCTGAGATTCTTAAAAGGCAAGGAGCACAATTGAT TGAGCTTGAAAATCTTTATAAGCAAGAGCAGGTTCTGAGAAAGCGTTATTATAACACAAT TGAAGATATGAAGGGAAAAATAAGAGTTTTTTGTCGTCTGCGTCCTCTAAATGATAAGGA GCTCATTGAAAAGGACAAGAATATTGTTTGCAGCCCTGATGAGTTTACAGTTGCACATCC ATGGAAAGATGACAAGTCAAAACAACATATATATGACCGTGTTTTTGATGCTAACACTAC CCAAGAAGAAGTATTTGAGGACACGAAGTATCTAGTTCAATCGGCCGTTGATGGATATAA TGTTTGTATATTTGCTTATGGGCAAACTGGTTCTGGAAAAACTTTTACAATTTATGGATC TGAAAACAATCCTGGTCTTACCCCAAGGGCTACCTCTGAACTTTTTAGGGTGATAAAGCG TGATGGTCACAAATATTCATTTTCTTTGAAGGCATATATGGTTGAGCTTTATCAGGATAA TCTTGTGGACCTGTTGTTGGCCAAAAACGCAACACACCAAAAATTGGAAATAAAAAAGGA TTCCAAGGGGGTTGTTACTGTTGAAAATGTGACAGTTGTGAACATTTCAAGTTTTGAAGA ACTGAGGGCTATAATTTTAAGAGGTTCCGAGAGAAGACACACCGCTGGAACAAATATGAA TGTTGAGAGCTCAAGGTCTCATTTAATTCTTTCAATCATTATTGAAAGTACCAACCTCCA GACTCAATCTTATGCAAGAGGAAAGCTAAGTTTCGTGGACCTTGCTGGTTCTGAGAGGGT GAAAAAGTCCGGCTCAGCAGGAAAACAACTGAAAGAAGCTCAAAGCATCAATAAGTCTCT TTCTGCATTGGCTGATGTGATTGGGGCTTTATCTTCTGATGGACAACATATACCTTATCG GAACCATAAGTTGACAATGCTGATGAGTGATTCTCTTGGAGGCAATGCGAAAACCTTGAT GTTTGTGAATGTCTCACCAGCAGAGTCCAACCTGGAGGAGACTTACAATTCACTCATGTA TGCTTCACGAGTGCGTTGCATTGTCAATGATACGAGCAAGCATGTTGCCCCAAAGGAAAT CATGAGGTTGAAGAAGTTAATTGCTTATTGGAAGGAGCAAGCTGGCAAGCGTAGTGAAGA CGACGACCTGGAGGAAATACAGGAAGAGAGGACACCAAAGGAGAAAGCAGATAATCGCTT GACTAGCTGAGAACAAGGTACCATCAGAATTCTATGCCCCTGGTTGCATCCTTGCACCGT CTGCAGAGGTGACTGATGTTGATGATCATTTTCGACTCGCCGACGCCGACGTGTTCACCA ATCACCCGCTAACAGAACCTTCCGGTATGACCTAACAATGTTGTACACCAATTGTATAGT AACAGATTATATTATGGCAATGATGCCTCTTGTACAAAGGGAACCGTAGCACACATTCAT AGGAGAATCAGATGGTGGAAGAGTTATTAGAACTAAGCTCCTTTTTGTCC