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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0666800-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:34038375:34039430:-1 gene:Os04g0666800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H1005F08.21 protein. (Os04t0666800-01)
Sequence

ATGGCCGCTGCTCGGTTTCCTCTCCTTGTCCTCTGCCTCCTGCCGATCATCGTCTGCAGC
GTCGTGGACGCGGAGCTGACCCATCTCCACTTCTACTTCCACGAGGTCGACGCCGGCACG
CCCAACGCCACCGTCGTCAACGTCGCCAGCCTTCACCGGAACTCGTCGACGTTCGGCGAC
GTGAACGTGTTGGACAACGCGCTGCGGGAGGGGCCGGACCCGGCGTCGCGGCTGATCGGG
AGGGCGCACGGCCTCGCGGTGCACGCGTCGCTGGACGAGACGGGCGGCCTCACGGCCATC
AACTTCGTCTTCTCCGACTACGGCGCGTACAGCGGCAGCACGCTGGCCACGCAGGGCCAC
TTCATCACGACGGGCCCGTCGGAGCGGAGCATCGTCGGCGGCACGGGCAAGCTCCGGTTC
GCGCGCGGGTACATGACCAGCAAGCTTCTCAGCTCCACGGACACCGCCATCGTCGTCGTC
TTCGACATGTACTTCACCCTCGACCATTGA

Peptide Sequence

PEP ID

Os04t0666800-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:34038375:34039430:-1 gene:Os04g0666800 transcript:Os04t0666800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H1005F08.21 protein. (Os04t0666800-01)
Sequence

MAAARFPLLVLCLLPIIVCSVVDAELTHLHFYFHEVDAGTPNATVVNVASLHRNSSTFGD
VNVLDNALREGPDPASRLIGRAHGLAVHASLDETGGLTAINFVFSDYGAYSGSTLATQGH
FITTGPSERSIVGGTGKLRFARGYMTSKLLSSTDTAIVVVFDMYFTLDH

Transcript Sequence

Transcript ID

Os04t0666800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:34038375:34039430:-1 gene:Os04g0666800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H1005F08.21 protein. (Os04t0666800-01)
Sequence

GCACAGATCGAGGAGATAATTAGCTCACTCCATGGCCGCTGCTCGGTTTCCTCTCCTTGT
CCTCTGCCTCCTGCCGATCATCGTCTGCAGCGTCGTGGACGCGGAGCTGACCCATCTCCA
CTTCTACTTCCACGAGGTCGACGCCGGCACGCCCAACGCCACCGTCGTCAACGTCGCCAG
CCTTCACCGGAACTCGTCGACGTTCGGCGACGTGAACGTGTTGGACAACGCGCTGCGGGA
GGGGCCGGACCCGGCGTCGCGGCTGATCGGGAGGGCGCACGGCCTCGCGGTGCACGCGTC
GCTGGACGAGACGGGCGGCCTCACGGCCATCAACTTCGTCTTCTCCGACTACGGCGCGTA
CAGCGGCAGCACGCTGGCCACGCAGGGCCACTTCATCACGACGGGCCCGTCGGAGCGGAG
CATCGTCGGCGGCACGGGCAAGCTCCGGTTCGCGCGCGGGTACATGACCAGCAAGCTTCT
CAGCTCCACGGACACCGCCATCGTCGTCGTCTTCGACATGTACTTCACCCTCGACCATTG
AATACTACTCCGTGGTGTGTTATATATCGTGCAGTGCTTGCTTTGGTGTTCGGTTGAACA
TATGTATGCACGGCGATCGTGACGAATACTGGGGTTCGGAGAATTCTTTTCCGACCCATC
GTCTCATAGGCCCAATTCACCACTCCTACGCTGTACTGACACACTCATGTAAAAATAAAC
TCGGTGTTATAATTGCTCAGGGCAAAGCATCCTTATAAATAACATTTCGCCTC