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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0665900-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:33990056:33990556:-1 gene:Os04g0665900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VQ motif-containing protein 17 description:Similar to H1005F08.13 protein. (Os04t0665900-00)
Sequence

ATGAAGCACCACGCCATGAAGTCCCAGTCCCGCGCCTCGTCGTCGTCGGCGACGCACAAG
CTCTCCCACGCCATCGCGAAGGCGCCGCCGAGGAAGATCAAGATCGTGCACGTCCTGGCG
CCGGAGGTCATCAAGACGGACGCGAGGCACTTCCGCGACCTCGTCCAGCGGCTCACCGGG
AAGCCGGCCGCCGACGGGCCCGCCGCGGCGTCGTCGCAGCCGGACCCGTGCGACACCGCT
GGCGACGAGGGTGGCTTTGTCGCCGACGGCGCCGGTGCGGCGGCGGCGGCGGCGGCGGCG
ACGATCAAGGCGGAAATAAAGGTGGAGGAGGCCGTGGCGGAGGCGGAGGCGGAGGCGGAG
GCGTCGGGAGGATTACTGCACGCGCTCGGGGAAGACGACAGGAACGACATGTTCTTACAG
TGGCTACAGAGTGGCTCTTGCATCGACATGGATGCTGTTGGTTTCTCATGA

Peptide Sequence

PEP ID

Os04t0665900-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:33990056:33990556:-1 gene:Os04g0665900 transcript:Os04t0665900-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VQ motif-containing protein 17 description:Similar to H1005F08.13 protein. (Os04t0665900-00)
Sequence

MKHHAMKSQSRASSSSATHKLSHAIAKAPPRKIKIVHVLAPEVIKTDARHFRDLVQRLTG
KPAADGPAAASSQPDPCDTAGDEGGFVADGAGAAAAAAAATIKAEIKVEEAVAEAEAEAE
ASGGLLHALGEDDRNDMFLQWLQSGSCIDMDAVGFS

Transcript Sequence

Transcript ID

Os04t0665900-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:33990056:33990556:-1 gene:Os04g0665900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VQ motif-containing protein 17 description:Similar to H1005F08.13 protein. (Os04t0665900-00)
Sequence

ATGAAGCACCACGCCATGAAGTCCCAGTCCCGCGCCTCGTCGTCGTCGGCGACGCACAAG
CTCTCCCACGCCATCGCGAAGGCGCCGCCGAGGAAGATCAAGATCGTGCACGTCCTGGCG
CCGGAGGTCATCAAGACGGACGCGAGGCACTTCCGCGACCTCGTCCAGCGGCTCACCGGG
AAGCCGGCCGCCGACGGGCCCGCCGCGGCGTCGTCGCAGCCGGACCCGTGCGACACCGCT
GGCGACGAGGGTGGCTTTGTCGCCGACGGCGCCGGTGCGGCGGCGGCGGCGGCGGCGGCG
ACGATCAAGGCGGAAATAAAGGTGGAGGAGGCCGTGGCGGAGGCGGAGGCGGAGGCGGAG
GCGTCGGGAGGATTACTGCACGCGCTCGGGGAAGACGACAGGAACGACATGTTCTTACAG
TGGCTACAGAGTGGCTCTTGCATCGACATGGATGCTGTTGGTTTCTCATGAATCCGATCA
GGTGATCCATGCATTGGAGTT