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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0665800-02
CDS Infomation

cds chromosome:IRGSP-1.0:4:33986422:33989276:1 gene:Os04g0665800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H1005F08.12 protein. (Os04t0665800-01);Similar to H1005F08.12 protein. (Os04t0665800-02);Similar to H1005F08.12 protein. (Os04t0665800-03)
Sequence

ATGGCCGCCGCCGCCGCCGCGGCGCTCATCACCGCCGCCTCCACTCCTTTCCCGCTGGTC
TCCTTCCGCAGCCGGCGGGATGGCCACCTGAGCCTTTCGCCTCCTCGCCGCCCCGGCGCC
GGGCGCTGCAGGGCCTCGGCGCCGACGTTCCAGGGGGGACCCGCCGCCAGCTACGCCCGC
GAGATGGAGCGCCTCTCCGCCAAGGAGTCCCTCCTCCTCGCCTTCAGAGATGCTGGAGGG
TTTGAATCCTTGGTTAGTGGAAAGACTACAGGGATGCAGAAGATTGATGTCAATGAGCGG
ATTGTTGGGCTCGAGCGTCTAAACCCCACTCCACGGCCCACAACATCTCCCTTTCTGGAA
GGTCGATGGAACTTTGAATGGTTTGGTGACAGCAGTCCTGGAGCACTTGCAGCCCGTCTT
CTGTTTGAGAGGTCACCTACAACTGTTGCACACTTTACAGGACTTGATGTCCTGATCAAG
GATGGATACTCCAAAATTTCTTCCAACGTGAAGTTCTTAAATACGGTGCAAAGCAAGTTC
CTGCTGACTACTCAGTTGTCTGTGGAGGGTCCTATTAGGATGAAAGAGGAATATGTCGAG
GGCCTAATAGAGATCCCTAGGATCAGAGAAGAAACACTGCCTGATCAACTAAAGGGTTTC
TTTGGACAAACTGCAGGTGCTCTGCAACAACTCCCTGCCCCCATAAGGGACGCTGTTTCA
GAGGGGATTAAATTGCCACTTAATGGGATGTTCCAGCGCCTATTCATGATTTCTTACTTG
GATGAGGAAATACTGATTATCAGAGATGCATCTGGAGCACCTGATGTCCTAACAAGATTG
GAAGGGCCACAGCCAAATTCAATTGATGGCACATCAGACGCAGTGCTGTCAGAATATGAA
AGCTAG

Peptide Sequence

PEP ID

Os04t0665800-02
PEP Infomation

pep chromosome:IRGSP-1.0:4:33986422:33989276:1 gene:Os04g0665800 transcript:Os04t0665800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H1005F08.12 protein. (Os04t0665800-01);Similar to H1005F08.12 protein. (Os04t0665800-02);Similar to H1005F08.12 protein. (Os04t0665800-03)
Sequence

MAAAAAAALITAASTPFPLVSFRSRRDGHLSLSPPRRPGAGRCRASAPTFQGGPAASYAR
EMERLSAKESLLLAFRDAGGFESLVSGKTTGMQKIDVNERIVGLERLNPTPRPTTSPFLE
GRWNFEWFGDSSPGALAARLLFERSPTTVAHFTGLDVLIKDGYSKISSNVKFLNTVQSKF
LLTTQLSVEGPIRMKEEYVEGLIEIPRIREETLPDQLKGFFGQTAGALQQLPAPIRDAVS
EGIKLPLNGMFQRLFMISYLDEEILIIRDASGAPDVLTRLEGPQPNSIDGTSDAVLSEYE
S

Transcript Sequence

Transcript ID

Os04t0665800-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:33986422:33989276:1 gene:Os04g0665800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H1005F08.12 protein. (Os04t0665800-01);Similar to H1005F08.12 protein. (Os04t0665800-02);Similar to H1005F08.12 protein. (Os04t0665800-03)
Sequence

TCTGCAACTCATCTCGGCACCACCACGCCGCTCTTCTCACTCAGGTCCCGCATGGCCGCC
GCCGCCGCCGCGGCGCTCATCACCGCCGCCTCCACTCCTTTCCCGCTGGTCTCCTTCCGC
AGCCGGCGGGATGGCCACCTGAGCCTTTCGCCTCCTCGCCGCCCCGGCGCCGGGCGCTGC
AGGGCCTCGGCGCCGACGTTCCAGGGGGGACCCGCCGCCAGCTACGCCCGCGAGATGGAG
CGCCTCTCCGCCAAGGAGTCCCTCCTCCTCGCCTTCAGAGATGCTGGAGGGTTTGAATCC
TTGGTTAGTGGAAAGACTACAGGGATGCAGAAGATTGATGTCAATGAGCGGATTGTTGGG
CTCGAGCGTCTAAACCCCACTCCACGGCCCACAACATCTCCCTTTCTGGAAGGTCGATGG
AACTTTGAATGGTTTGGTGACAGCAGTCCTGGAGCACTTGCAGCCCGTCTTCTGTTTGAG
AGGTCACCTACAACTGTTGCACACTTTACAGGACTTGATGTCCTGATCAAGGATGGATAC
TCCAAAATTTCTTCCAACGTGAAGTTCTTAAATACGGTGCAAAGCAAGTTCCTGCTGACT
ACTCAGTTGTCTGTGGAGGGTCCTATTAGGATGAAAGAGGAATATGTCGAGGGCCTAATA
GAGATCCCTAGGATCAGAGAAGAAACACTGCCTGATCAACTAAAGGGTTTCTTTGGACAA
ACTGCAGGTGCTCTGCAACAACTCCCTGCCCCCATAAGGGACGCTGTTTCAGAGGGGATT
AAATTGCCACTTAATGGGATGTTCCAGCGCCTATTCATGATTTCTTACTTGGATGAGGAA
ATACTGATTATCAGAGATGCATCTGGAGCACCTGATGTCCTAACAAGATTGGAAGGGCCA
CAGCCAAATTCAATTGATGGCACATCAGACGCAGTGCTGTCAGAATATGAAAGCTAGTGT
TAATTGGGTGCACTAATTAGAACGTCGTGATTAGTTTTTTGTTCTTCTGTTCAGCCACTT
TTCACGCTTGCACATACATAATAACTGTAGTGCGTAACAGCATCCACTTGAATGGATTAA
CTTACCTCC