Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0663500-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:33856586:33859127:1 gene:Os04g0663500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0099L20.5 protein. (Os04t0663500-00)
Sequence

ATGGACCCCGGGAAATCGTTCTCTGCGGCGGAGGAGGAGGCGACGGATTCGGTCTCTACG
AAGCCGGAGGAGGTTGCGGCTTACCAGAGCAGCGAGGCCAAGCAGGCGAAGCTACAGTCC
ATGCTCGCCGCCCTCCTCGACGACCCCATACTCGCCGACGTGCCCAGGAAGCCCTCCCTC
GCCGACGTCGACACGCTGATCAACCTCGAGCTCGGCAGCGCCATGCGGCTAACCGTCGTC
AAGCTGGATGGCACCTCCTTCGATGTTGCAATGTTGAACACAGCCACTGTCAAGGATTTG
AAGATGGCTATCAGGAAGAAGACGGATGAGATTGAACAGGAAAAGATGGGCCATCGTCAT
ATCTCATGGAAGCATATTTGGGATAACTACTGTCTGACACATCAAAATGAGAAGTTGATA
GATGACAATTCCGTGCTTTCGTCTAATGGCATTTGTAATAACTCCAAGGTTTATTTCTCG
CCGCACGTTATGTCCAGGGTATATCGAAAGCACTCAAGAAGAAGAAAACACCGCTTTTTC
CATGGTCTTCATAGGAAAATGTGA

Peptide Sequence

PEP ID

Os04t0663500-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:33856586:33859127:1 gene:Os04g0663500 transcript:Os04t0663500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0099L20.5 protein. (Os04t0663500-00)
Sequence

MDPGKSFSAAEEEATDSVSTKPEEVAAYQSSEAKQAKLQSMLAALLDDPILADVPRKPSL
ADVDTLINLELGSAMRLTVVKLDGTSFDVAMLNTATVKDLKMAIRKKTDEIEQEKMGHRH
ISWKHIWDNYCLTHQNEKLIDDNSVLSSNGICNNSKVYFSPHVMSRVYRKHSRRRKHRFF
HGLHRKM

Transcript Sequence

Transcript ID

Os04t0663500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:33856586:33859127:1 gene:Os04g0663500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0099L20.5 protein. (Os04t0663500-00)
Sequence

TCCAATCCAACGGCTGGAACGCGCAGCCGCAGGAATAACGCTACGGCCCAATTAATTACA
ATGGGCCACACGCTCGTGGCCCAACTAGCACTGGCCGGCGAGAGTTCGTCCTCCACGGCG
GCGGCGGCGGCGGCGGAAACGCAATGGACCCCGGGAAATCGTTCTCTGCGGCGGAGGAGG
AGGCGACGGATTCGGTCTCTACGAAGCCGGAGGAGGTTGCGGCTTACCAGAGCAGCGAGG
CCAAGCAGGCGAAGCTACAGTCCATGCTCGCCGCCCTCCTCGACGACCCCATACTCGCCG
ACGTGCCCAGGAAGCCCTCCCTCGCCGACGTCGACACGCTGATCAACCTCGAGCTCGGCA
GCGCCATGCGGCTAACCGTCGTCAAGCTGGATGGCACCTCCTTCGATGTTGCAATGTTGA
ACACAGCCACTGTCAAGGATTTGAAGATGGCTATCAGGAAGAAGACGGATGAGATTGAAC
AGGAAAAGATGGGCCATCGTCATATCTCATGGAAGCATATTTGGGATAACTACTGTCTGA
CACATCAAAATGAGAAGTTGATAGATGACAATTCCGTGCTTTCGTCTAATGGCATTTGTA
ATAACTCCAAGGTTTATTTCTCGCCGCACGTTATGTCCAGGGTATATCGAAAGCACTCAA
GAAGAAGAAAACACCGCTTTTTCCATGGTCTTCATAGGAAAATGTGATCCCATCTTGTTT
ATTTGAGCTGGTGTTGGGGAGCAGCATGGTCACATCAGAGACAAA