Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0662800-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:33822434:33828560:1 gene:Os04g0662800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of chromosome condensation, RCC1 domain containing protein. (Os04t0662800-01)
Sequence

ATGTCGGCCAGCGGCGAGCCCGAGAAGGTCCCCGCCGCCGCCGAGGGAGAGGAGAAGGCG
GACGGCGCGAAGGATGCCGCGGGCTCCGGGGGAGAGCTGCTGTACTGCGGCGCGACCAAC
TTCGAGACCATGGGGCGGAAGGTGGTGGGCGGGGCGCAGGGTAACCTAGTGTCGCCGACG
CGGATGCGGTCGCTCATGGGCGTCGACATACGATTCGTTGCCTCCGGGTGCACGGCTTGC
CATTGTGTTGCCTTGGATGCTGAAGGACGTTGCTATACATGGGGTCGAAATGAGAAGGGG
CAGTTGGGGCATGGGGATACTCTTCAGCGTAACCTGCCGACTGTTGTTTCTGAACTATCA
AAGTACAAAGTCATTAAAGCAAGTGTTGGAAGAAATCACACAGTGGTTGTAACCGATGAC
GGGAAGTCATTCTCATTTGGTCACAATAAACACGGACAGTTGGGTACAGGCTCCCTAAGG
AATGAAATTGAGACATCACCAATGCCCTGTCTTGTTACTGAAGCAACTAATGCTGTTTGT
GGTGCTGATTTTACTGTCTGGCTGTCATCAGTGGAGGGCTCTACTATACTTACAGCAGGT
CTTCCCCAGTACGGTCAGCTTGGTCATGGAACCGACAATGAGTACAATATTAAAGACTCA
TCTGTAAAGCTGGCATATGATCCCCAGCCCCGTCCCAGGGCAATAGCTTCATTATCTGGG
AAAACTATCGTCAAAGCTGCATGTGGAACAAATCATACAGTTGCAGTTGATTCAAGTGGC
TATGTTTACACATGGGGCTTTGGTGGATATGGAAGGTTGGGCCATAGAGAACAAAAGGAT
GAGTGGCAGCCTCGCCTTGTTGAAGTCTTCCAGAAGCATAATGTTCTGCCACCCAATGCT
ATTATATCAGCTGGTGCGGCAAGTTCTGCATGCACTGCCGGTGGAGGACAGTTGTACATG
TGGGGAAAGTTAAAGAATACAGGCGACGACTGGATGTATCCAAAGCCATTATTGGATTTA
AGTGGTTGGAACATTCGTTGCATGGCTTCTGGTAACATGCACCACGTTGTTGGTGCAGAT
GATTCTTGCATAAGCTGGGGAACAGCCCAAAATGGAGAGCTTGGCTATGGCCCTAATGGG
CAAAAGTCATCTGCTAATCCTAAAAAGGTTGACATCCTTGAAGGAATGCATGTTATAAGT
GTTGGTTGTGGATATGGGTTGTCTGCGATTGTTGTAGACAGATCAATTGCTAGTGACCGG
CTTAATCAGCTGGATATTTATGACGGTGATACCTCCACTGAAGTAGAAGACAGAGTGGAG
GTCCAGGTTGCCAAGAAGGCATCTGCTAGCACCAATGCACGATCTAACAAGCGCAAGAAA
ACCAAGGATGTTTCCGAATCAGAAGAGGATGATGATGAGGAAGATGATAGCGACGACGAT
GAAAATGGTGAAATAAAAGGTGGTAAGGGTAGACGTGGCCGCAAACCTTCAAACAGAGGG
AGAGGCAGGGGAGCTAAAAAGGCAACTCCTGAGCCAAAGCCATCTGCAAGGGGCAGAGGC
CGCCCGAAGAAAACCGAGTCTCCTGCTCAGAAAACTGGGAGCTTGGGGCGAGGCGGGAAG
AGGGGGAAGCGAGGAAGAGCTCGGAAGTGA

Peptide Sequence

PEP ID

Os04t0662800-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:33822434:33828560:1 gene:Os04g0662800 transcript:Os04t0662800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of chromosome condensation, RCC1 domain containing protein. (Os04t0662800-01)
Sequence

MSASGEPEKVPAAAEGEEKADGAKDAAGSGGELLYCGATNFETMGRKVVGGAQGNLVSPT
RMRSLMGVDIRFVASGCTACHCVALDAEGRCYTWGRNEKGQLGHGDTLQRNLPTVVSELS
KYKVIKASVGRNHTVVVTDDGKSFSFGHNKHGQLGTGSLRNEIETSPMPCLVTEATNAVC
GADFTVWLSSVEGSTILTAGLPQYGQLGHGTDNEYNIKDSSVKLAYDPQPRPRAIASLSG
KTIVKAACGTNHTVAVDSSGYVYTWGFGGYGRLGHREQKDEWQPRLVEVFQKHNVLPPNA
IISAGAASSACTAGGGQLYMWGKLKNTGDDWMYPKPLLDLSGWNIRCMASGNMHHVVGAD
DSCISWGTAQNGELGYGPNGQKSSANPKKVDILEGMHVISVGCGYGLSAIVVDRSIASDR
LNQLDIYDGDTSTEVEDRVEVQVAKKASASTNARSNKRKKTKDVSESEEDDDEEDDSDDD
ENGEIKGGKGRRGRKPSNRGRGRGAKKATPEPKPSARGRGRPKKTESPAQKTGSLGRGGK
RGKRGRARK

Transcript Sequence

Transcript ID

Os04t0662800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:33822434:33828560:1 gene:Os04g0662800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of chromosome condensation, RCC1 domain containing protein. (Os04t0662800-01)
Sequence

GCAATCTCTAATTTCAAATCTCCCCCATTCGTTGCTTCTCCTCTCCGCTACCCCCGAACA
AATCTAGGGTTTCGGATCGGAATCCTCCACCGCCGCCGGCGTTACTACCGGCGATAATGT
CGGCCAGCGGCGAGCCCGAGAAGGTCCCCGCCGCCGCCGAGGGAGAGGAGAAGGCGGACG
GCGCGAAGGATGCCGCGGGCTCCGGGGGAGAGCTGCTGTACTGCGGCGCGACCAACTTCG
AGACCATGGGGCGGAAGGTGGTGGGCGGGGCGCAGGGTAACCTAGTGTCGCCGACGCGGA
TGCGGTCGCTCATGGGCGTCGACATACGATTCGTTGCCTCCGGGTGCACGGCTTGCCATT
GTGTTGCCTTGGATGCTGAAGGACGTTGCTATACATGGGGTCGAAATGAGAAGGGGCAGT
TGGGGCATGGGGATACTCTTCAGCGTAACCTGCCGACTGTTGTTTCTGAACTATCAAAGT
ACAAAGTCATTAAAGCAAGTGTTGGAAGAAATCACACAGTGGTTGTAACCGATGACGGGA
AGTCATTCTCATTTGGTCACAATAAACACGGACAGTTGGGTACAGGCTCCCTAAGGAATG
AAATTGAGACATCACCAATGCCCTGTCTTGTTACTGAAGCAACTAATGCTGTTTGTGGTG
CTGATTTTACTGTCTGGCTGTCATCAGTGGAGGGCTCTACTATACTTACAGCAGGTCTTC
CCCAGTACGGTCAGCTTGGTCATGGAACCGACAATGAGTACAATATTAAAGACTCATCTG
TAAAGCTGGCATATGATCCCCAGCCCCGTCCCAGGGCAATAGCTTCATTATCTGGGAAAA
CTATCGTCAAAGCTGCATGTGGAACAAATCATACAGTTGCAGTTGATTCAAGTGGCTATG
TTTACACATGGGGCTTTGGTGGATATGGAAGGTTGGGCCATAGAGAACAAAAGGATGAGT
GGCAGCCTCGCCTTGTTGAAGTCTTCCAGAAGCATAATGTTCTGCCACCCAATGCTATTA
TATCAGCTGGTGCGGCAAGTTCTGCATGCACTGCCGGTGGAGGACAGTTGTACATGTGGG
GAAAGTTAAAGAATACAGGCGACGACTGGATGTATCCAAAGCCATTATTGGATTTAAGTG
GTTGGAACATTCGTTGCATGGCTTCTGGTAACATGCACCACGTTGTTGGTGCAGATGATT
CTTGCATAAGCTGGGGAACAGCCCAAAATGGAGAGCTTGGCTATGGCCCTAATGGGCAAA
AGTCATCTGCTAATCCTAAAAAGGTTGACATCCTTGAAGGAATGCATGTTATAAGTGTTG
GTTGTGGATATGGGTTGTCTGCGATTGTTGTAGACAGATCAATTGCTAGTGACCGGCTTA
ATCAGCTGGATATTTATGACGGTGATACCTCCACTGAAGTAGAAGACAGAGTGGAGGTCC
AGGTTGCCAAGAAGGCATCTGCTAGCACCAATGCACGATCTAACAAGCGCAAGAAAACCA
AGGATGTTTCCGAATCAGAAGAGGATGATGATGAGGAAGATGATAGCGACGACGATGAAA
ATGGTGAAATAAAAGGTGGTAAGGGTAGACGTGGCCGCAAACCTTCAAACAGAGGGAGAG
GCAGGGGAGCTAAAAAGGCAACTCCTGAGCCAAAGCCATCTGCAAGGGGCAGAGGCCGCC
CGAAGAAAACCGAGTCTCCTGCTCAGAAAACTGGGAGCTTGGGGCGAGGCGGGAAGAGGG
GGAAGCGAGGAAGAGCTCGGAAGTGAGTTTAAACCAAGTAGGGCATTGTTGAACTCAGAT
CGTGTGATTGTCTAACTCCTGATGCGATCCAACCCAGCCATTCAAGGGCATTTGTTTTCT
TAGCAATGGTTTCTTACTCTTGCCCGCCTTACATTGTTGAGCCTGTTTTTTGAGTGGAAT
TACCTCTGGTATTGAAGACTTGTCTGATTTGAACCTG