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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0661800-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:33774455:33777293:-1 gene:Os04g0661800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Mediator complex protein OsMED7, Mediator 7_1 description:MED7 family protein. (Os04t0661800-01)
Sequence

ATGGCCACATCATCAGCATATCCTCCACCTCCTCCATATTACCGACTATACAAGGATTAC
GAAAAGGATCCTTCATCTGCACCTGAACCTCCACCGCCAGTTGATGGACCATATCAACTC
TTCGGTGCTACCTACACAACAGATGTGGTGCTCCCAAGCTTAGAGGATCAAGGTGTTCGT
CAGCTTTATCCGAAGAGCCCAGATATCGATTTCAAAAAGGAGCTAAGGACCCTGAACAGA
GAGCTTCAGCTCCATATTTTGGAGCTAGCAGATATTTTAGTGGAAAGACCATCACAGTAT
GCTCGTAGGGTAGAGGATATTTCACTCATTTTCAAGAACTTGCACCACCTTCTTAATTCC
TTACGACCTCACCAAGCCAGAGCCACTCTGATTCACATGCTTGAGAACCAAATTCAGCGT
CGGAAACAAGCAATTGAAGATATAAAGCAGAGGAGAGAGGAGGCACAAAAGCTACTTGGG
GAATCACTGCTAATCTTAGATGGAAACCAGCCGAGTTTGCCTGCAATGTGA

Peptide Sequence

PEP ID

Os04t0661800-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:33774455:33777293:-1 gene:Os04g0661800 transcript:Os04t0661800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Mediator complex protein OsMED7, Mediator 7_1 description:MED7 family protein. (Os04t0661800-01)
Sequence

MATSSAYPPPPPYYRLYKDYEKDPSSAPEPPPPVDGPYQLFGATYTTDVVLPSLEDQGVR
QLYPKSPDIDFKKELRTLNRELQLHILELADILVERPSQYARRVEDISLIFKNLHHLLNS
LRPHQARATLIHMLENQIQRRKQAIEDIKQRREEAQKLLGESLLILDGNQPSLPAM

Transcript Sequence

Transcript ID

Os04t0661800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:33774455:33777293:-1 gene:Os04g0661800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Mediator complex protein OsMED7, Mediator 7_1 description:MED7 family protein. (Os04t0661800-01)
Sequence

GGGTCGGTTCGGTCGCTCGTCTCCGTCTCCGTCTCCGCCACCGCCACCGCCGCCGCCGCT
CGCCGGAGGCTCTCGCGCCCTTCCTCGAGGTTGGCATCCCCATCTGTGCTTCGTCCAAAC
AACTGTTCATGTTTTTCCCATTCCGGCTTGGAAGTTGAGTTGGTTCCGTACCTGGCATGG
CCACATCATCAGCATATCCTCCACCTCCTCCATATTACCGACTATACAAGGATTACGAAA
AGGATCCTTCATCTGCACCTGAACCTCCACCGCCAGTTGATGGACCATATCAACTCTTCG
GTGCTACCTACACAACAGATGTGGTGCTCCCAAGCTTAGAGGATCAAGGTGTTCGTCAGC
TTTATCCGAAGAGCCCAGATATCGATTTCAAAAAGGAGCTAAGGACCCTGAACAGAGAGC
TTCAGCTCCATATTTTGGAGCTAGCAGATATTTTAGTGGAAAGACCATCACAGTATGCTC
GTAGGGTAGAGGATATTTCACTCATTTTCAAGAACTTGCACCACCTTCTTAATTCCTTAC
GACCTCACCAAGCCAGAGCCACTCTGATTCACATGCTTGAGAACCAAATTCAGCGTCGGA
AACAAGCAATTGAAGATATAAAGCAGAGGAGAGAGGAGGCACAAAAGCTACTTGGGGAAT
CACTGCTAATCTTAGATGGAAACCAGCCGAGTTTGCCTGCAATGTGAAGACATGTGATGT
ATCTGCTTCCCTGCTTCCTAACGTGCCAAGTTGGCTAGCTAGAGAGTGCACTTGGCAGTT
CACCTGTAGAAATAGTCTAGTGAGTAGTGTGACCGTGGGAGATACTTCTGGCTTTTGTGC
AAACTCCTTATTTATTGCCTGTTTGTGTGTTGTGATTTGTGAAACTTTAAACATTGAACC
TATCCTGGACTGACGGTAGAAAAGCTTCAATGTTCTCCTGTAATGCATACAGTTTCATGA
TGTTTAGAACC