Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0661300-02
CDS Infomation

cds chromosome:IRGSP-1.0:4:33740412:33746887:-1 gene:Os04g0661300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0112G12.10 protein. (Os04t0661300-01);Similar to H0112G12.10 protein. (Os04t0661300-02)
Sequence

ATGGCGCGTCCGAGAGGCAGGAAGCGTGCGGCGGCGGCGGCGGCGGTGGCGGAGGAGGAC
TCCAGCAAGCCGGAGGCTGCAGAGGCGAAGAAGCCGGCCGCGCGGGGGCGGGGGAAGCGT
GCCAAGGCGTCACCCAAGCCCAAGCCGGAGACGGAGTACTTCCCCGAGAAGCGGAATCTG
GAGGATCTTTGGCTATCAGCATTTCCGGTTGGGACCGAGTGGGAAAACATTGATAAGATA
AAGGAGTTCAACTGGAACTTTGAAAATTTGGAGAAAGCACTAGAAGAAGGAGGGGAGCTT
TATGGGAAAACAGTTTACTTGTTTGGAAGCACGGAGCCTCAACTATTGGAGGTTAATGGT
GAATCAAAGATAGTGCTTATTCCTATAGTTGTTGCTGTTGACTGCCCTTTTCCTCCCTCA
GACAAAATTGGCATAAATTCTGTCCAAAGGGAAAATGAAGAGATAGTGCCAATGAAGGCC
ATGAAGATGGCCTGGGTGCCTTATGTTCCGCTGGAGGATCGGCTTAGTAGGATTGACAGT
TTGAAAACAAAAATATTTACTCTTGGCTGCACCCAGCGGAGGTCTGCGCTGAGGCACCTC
AAAACTGAGAGAGTCAAATTGTTTGACTACTGCATGCCATATTATATGCCACTGAACCCT
CCCGAAGACGAAGATGATACAGTTGTCAACATCATATATCCCCTAGAACCCCCGATAGTA
TGTGACTTCGACTGGGAGATGGATGATTACGAGGACTTTGCTGATGAGAAAGTTAAAGAT
GAGGTGCTACCAGAGGATGAGAAAGAAAAATTTAAGGAATTCATAAAGGAGAGGGTTAGA
GAAAGGAAAAGAGAGCTAAAACAGGCTAAGGAAGCAAGAAAGAAAGCTATTGATGATATG
GACCCTAAGGTCAAAGAGGCATTTGAAAATATCAAATTTTACAAATTTTATCCTGTAAAA
ACTCCAGACACCCCTGATGTAAGCAACGTAAAGGCAAAGTACATCAATAGATATTACAGG
CATGCACATCATCTGATGTAA

Peptide Sequence

PEP ID

Os04t0661300-02
PEP Infomation

pep chromosome:IRGSP-1.0:4:33740412:33746887:-1 gene:Os04g0661300 transcript:Os04t0661300-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0112G12.10 protein. (Os04t0661300-01);Similar to H0112G12.10 protein. (Os04t0661300-02)
Sequence

MARPRGRKRAAAAAAVAEEDSSKPEAAEAKKPAARGRGKRAKASPKPKPETEYFPEKRNL
EDLWLSAFPVGTEWENIDKIKEFNWNFENLEKALEEGGELYGKTVYLFGSTEPQLLEVNG
ESKIVLIPIVVAVDCPFPPSDKIGINSVQRENEEIVPMKAMKMAWVPYVPLEDRLSRIDS
LKTKIFTLGCTQRRSALRHLKTERVKLFDYCMPYYMPLNPPEDEDDTVVNIIYPLEPPIV
CDFDWEMDDYEDFADEKVKDEVLPEDEKEKFKEFIKERVRERKRELKQAKEARKKAIDDM
DPKVKEAFENIKFYKFYPVKTPDTPDVSNVKAKYINRYYRHAHHLM

Transcript Sequence

Transcript ID

Os04t0661300-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:33740412:33746887:-1 gene:Os04g0661300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0112G12.10 protein. (Os04t0661300-01);Similar to H0112G12.10 protein. (Os04t0661300-02)
Sequence

GAACGCATAAATACTGATCCCCAATCGAAACGGCTGCTGAAACCCTAGCCCTAGCAATCG
AGAGAGAGGGAGAAGATGGCGCGTCCGAGAGGCAGGAAGCGTGCGGCGGCGGCGGCGGCG
GTGGCGGAGGAGGACTCCAGCAAGCCGGAGGCTGCAGAGGCGAAGAAGCCGGCCGCGCGG
GGGCGGGGGAAGCGTGCCAAGGCGTCACCCAAGCCCAAGCCGGAGACGGAGTACTTCCCC
GAGAAGCGGAATCTGGAGGATCTTTGGCTATCAGCATTTCCGGTTGGGACCGAGTGGGAA
AACATTGATAAGATAAAGGAGTTCAACTGGAACTTTGAAAATTTGGAGAAAGCACTAGAA
GAAGGAGGGGAGCTTTATGGGAAAACAGTTTACTTGTTTGGAAGCACGGAGCCTCAACTA
TTGGAGGTTAATGGTGAATCAAAGATAGTGCTTATTCCTATAGTTGTTGCTGTTGACTGC
CCTTTTCCTCCCTCAGACAAAATTGGCATAAATTCTGTCCAAAGGGAAAATGAAGAGATA
GTGCCAATGAAGGCCATGAAGATGGCCTGGGTGCCTTATGTTCCGCTGGAGGATCGGCTT
AGTAGGATTGACAGTTTGAAAACAAAAATATTTACTCTTGGCTGCACCCAGCGGAGGTCT
GCGCTGAGGCACCTCAAAACTGAGAGAGTCAAATTGTTTGACTACTGCATGCCATATTAT
ATGCCACTGAACCCTCCCGAAGACGAAGATGATACAGTTGTCAACATCATATATCCCCTA
GAACCCCCGATAGTATGTGACTTCGACTGGGAGATGGATGATTACGAGGACTTTGCTGAT
GAGAAAGTTAAAGATGAGGTGCTACCAGAGGATGAGAAAGAAAAATTTAAGGAATTCATA
AAGGAGAGGGTTAGAGAAAGGAAAAGAGAGCTAAAACAGGCTAAGGAAGCAAGAAAGAAA
GCTATTGATGATATGGACCCTAAGGTCAAAGAGGCATTTGAAAATATCAAATTTTACAAA
TTTTATCCTGTAAAAACTCCAGACACCCCTGATGTAAGCAACGTAAAGGCAAAGTACATC
AATAGATATTACAGGCATGCACATCATCTGATGTAATTGCATCCTATCTTGAAATGAGCT
ATCCAACTTGGAGAGCTGACACCGAAATTTTGAAAGCCGTGGGAGAGATTCCTGGCGACA
TCTTCAAATTGGGTCTCTTATAGACCCGGGGTGAAAACTTGTTGCACCTTAACTCTGTAC
TGCAGTTTTCGTCAGATCCTGCCATTCCTTAGAGTATCGCTTCCTTCGGCATTCTTTTTT
GTTGTGCGTCGTGTAACATTCTGGGAATAGATTATGTAACCATCAGGCCGTACATCTTGT
AAGAGCAAAACAATTGGTTTAGGAAAAATGCTGATTCCTTTCACCGTCCTGTGAAGGTTG
CTTGGGTGCAAACCCCTTGATTTTGTCTT