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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0661100-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:33733561:33734332:-1 gene:Os04g0661100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0112G12.8 protein. (Os04t0661100-00)
Sequence

ATGTCGAAGAAGACGGTGCTCAGGGTGGACACCTCCTGCGACAAATGCAAGCGCAAGATC
CTGCAAACCGTCTCCGGCCTCCAAGGTGTTGACAAGATCGATATCGACTCGGAGAAGGGA
ACGATGACGGTGACCGGCAGCGCGGACCCGGTGGACGTGATCGAGCGGACGAGGAAGGCC
GGGAAGCGCGCGGAAGTCGTGACCATCGGGCCGCCGCCGGCGTCGTCGTCGTCGTCGTCG
TCCAACCCGTCGACGGAGCAGCAGCAGATCAAGAAGCAGGCGCCGGCGGCCGAGGAGAAG
GTGTACACGGCGGCCGCGGAGAAGAGGGCGCCTGAGCCGCCGGCCACCGTGTACGTCCAC
TACATCCCCGCCTCGACGTGGTCGGCTCCGGCGTGGCCATCCTACGAGTACGACCAGAGC
GTAGTCTACCACCAGCAGGATCCCCCTCCAGCTTGCTCCATCATGTAA

Peptide Sequence

PEP ID

Os04t0661100-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:33733561:33734332:-1 gene:Os04g0661100 transcript:Os04t0661100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0112G12.8 protein. (Os04t0661100-00)
Sequence

MSKKTVLRVDTSCDKCKRKILQTVSGLQGVDKIDIDSEKGTMTVTGSADPVDVIERTRKA
GKRAEVVTIGPPPASSSSSSSNPSTEQQQIKKQAPAAEEKVYTAAAEKRAPEPPATVYVH
YIPASTWSAPAWPSYEYDQSVVYHQQDPPPACSIM

Transcript Sequence

Transcript ID

Os04t0661100-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:33733561:33734332:-1 gene:Os04g0661100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0112G12.8 protein. (Os04t0661100-00)
Sequence

CCGTCCATGTCGAAGAAGACGGTGCTCAGGGTGGACACCTCCTGCGACAAATGCAAGCGC
AAGATCCTGCAAACCGTCTCCGGCCTCCAAGGTGTTGACAAGATCGATATCGACTCGGAG
AAGGGAACGATGACGGTGACCGGCAGCGCGGACCCGGTGGACGTGATCGAGCGGACGAGG
AAGGCCGGGAAGCGCGCGGAAGTCGTGACCATCGGGCCGCCGCCGGCGTCGTCGTCGTCG
TCGTCGTCCAACCCGTCGACGGAGCAGCAGCAGATCAAGAAGCAGGCGCCGGCGGCCGAG
GAGAAGGTGTACACGGCGGCCGCGGAGAAGAGGGCGCCTGAGCCGCCGGCCACCGTGTAC
GTCCACTACATCCCCGCCTCGACGTGGTCGGCTCCGGCGTGGCCATCCTACGAGTACGAC
CAGAGCGTAGTCTACCACCAGCAGGATCCCCCTCCAGCTTGCTCCATCATGTAACTAACT
AAATAACTATATACTCATCGTTTCATCATGTAACTAGATCG