Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0659100-03
CDS Infomation	cds chromosome:IRGSP-1.0:4:33624438:33630894:-1 gene:Os04g0659100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRAIN SIZE 2 description:Glutamine synthetase shoot isozyme, chloroplast precursor (EC 6.3.1.2) (Glutamate--ammonia ligase) (Clone lambda-GS31). (Os04t0659100-01);Similar to Isoform 2 of Glutamine synthetase, chloroplastic. (Os04t0659100-02);Glutamine synthetase shoot isozyme, chloroplast precursor (EC 6.3.1.2) (Glutamate--ammonia ligase) (Clone lambda-GS31). (Os04t0659100-03)
Sequence	ATGGCGCAGGCGGTGGTGCCGGCGATGCAGTGCCAGGTCGGGGCCGTGCGGGCGAGGCCG GCGGCGGCTGCGGCGGCGGCGGGGGGGAGGGTGTGGGGAGTCAGGAGGACCGGGCGCGGC ACGTCGGGGTTCAGGGTGATGGCCGTGAGCACGGAGACCACCGGGGTGGTGACGCGGATG GAGCAGCTGCTCAACATGGACACCACCCCCTTCACCGACAAGATCATCGCCGAGTACATC TGGGTTGGAGGAACTGGAATTGACCTCAGAAGCAAATCAAGGACAATATCAAAACCAGTG GAGGACCCCTCGGAGCTACCAAAATGGAACTACGATGGATCAAGCACAGGGCAAGCTCCA GGAGAAGATAGTGAAGTCATCTTATACCCACAGGCTATATTCAAGGACCCATTTCGAGGT GGCAACAACATATTGGTTATGTGTGATACCTACACACCAGCTGGGGAACCCATCCCTACT AACAAACGTAACAGGGCTGCACAAGTATTCAGTGATCCAAAGGTTGTCAGCCAAGTGCCA TGGTTTGGAATAGAACAGGAGTACACTTTGCTCCAGAGAGACGTAAACTGGCCTCTTGGC TGGCCCGTTGGAGGCTACCCTGGGCCCCAGGGTCCATACTACTGCGCTGTAGGATCGGAC AAATCGTTTGGCCGTGACATATCAGATGCTCACTACAAGGCATGTCTTTATGCTGGAATT AACATTAGTGGAACAAATGGAGAGGTCATGCCTGGTCAGTGGGAGTACCAGGTTGGACCT AGTGTCGGTATTGAAGCTGGAGACCACATATGGATTTCAAGATATATTCTTGAGAGAATA ACGGAGCAGGCTGGTGTAGTGCTTACCCTTGACCCCAAACCAATTCAGGGAGACTGGAAT GGAGCTGGGTGCCACACAAACTACAGCACCAAGAGTATGCGTGAAGATGGAGGATTTGAG GTGATCAAGAAGGCAATCCTAAACCTATCACTTCGCCATGACTTGCATATAAGTGCATAT GGTGAAGGAAATGAAAGGAGGTTGACAGGTTTACACGAGACAGCTAGCATTGACAATTTC TCATGGGGTGTGGCAAACCGTGGATGCTCTATTCGGGTGGGGCGAGACACCGAGGCGAAG GGAAAAGGCTACTTGGAAGACCGTCGCCCGGCATCAAACATGGACCCGTACGTCGTGACA GCGCTATTGGCTGAAACCACAATTCTTTGGGAGCCAACCCTCGAAGCGGAGGTTCTTGCT GCTAAGAAGTTGGCCCTGAAGGTATGA

Peptide Sequence

PEP ID	Os04t0659100-03
PEP Infomation	pep chromosome:IRGSP-1.0:4:33624438:33630894:-1 gene:Os04g0659100 transcript:Os04t0659100-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRAIN SIZE 2 description:Glutamine synthetase shoot isozyme, chloroplast precursor (EC 6.3.1.2) (Glutamate--ammonia ligase) (Clone lambda-GS31). (Os04t0659100-01);Similar to Isoform 2 of Glutamine synthetase, chloroplastic. (Os04t0659100-02);Glutamine synthetase shoot isozyme, chloroplast precursor (EC 6.3.1.2) (Glutamate--ammonia ligase) (Clone lambda-GS31). (Os04t0659100-03)
Sequence	MAQAVVPAMQCQVGAVRARPAAAAAAAGGRVWGVRRTGRGTSGFRVMAVSTETTGVVTRM EQLLNMDTTPFTDKIIAEYIWVGGTGIDLRSKSRTISKPVEDPSELPKWNYDGSSTGQAP GEDSEVILYPQAIFKDPFRGGNNILVMCDTYTPAGEPIPTNKRNRAAQVFSDPKVVSQVP WFGIEQEYTLLQRDVNWPLGWPVGGYPGPQGPYYCAVGSDKSFGRDISDAHYKACLYAGI NISGTNGEVMPGQWEYQVGPSVGIEAGDHIWISRYILERITEQAGVVLTLDPKPIQGDWN GAGCHTNYSTKSMREDGGFEVIKKAILNLSLRHDLHISAYGEGNERRLTGLHETASIDNF SWGVANRGCSIRVGRDTEAKGKGYLEDRRPASNMDPYVVTALLAETTILWEPTLEAEVLA AKKLALKV

Transcript Sequence

Transcript ID	Os04t0659100-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:33624438:33630894:-1 gene:Os04g0659100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRAIN SIZE 2 description:Glutamine synthetase shoot isozyme, chloroplast precursor (EC 6.3.1.2) (Glutamate--ammonia ligase) (Clone lambda-GS31). (Os04t0659100-01);Similar to Isoform 2 of Glutamine synthetase, chloroplastic. (Os04t0659100-02);Glutamine synthetase shoot isozyme, chloroplast precursor (EC 6.3.1.2) (Glutamate--ammonia ligase) (Clone lambda-GS31). (Os04t0659100-03)
Sequence	GGTTGAGTGAGTTGGTGATTATCTGTAGGGGGTGAAAATGGCGCAGGCGGTGGTGCCGGC GATGCAGTGCCAGGTCGGGGCCGTGCGGGCGAGGCCGGCGGCGGCTGCGGCGGCGGCGGG GGGGAGGGTGTGGGGAGTCAGGAGGACCGGGCGCGGCACGTCGGGGTTCAGGGTGATGGC CGTGAGCACGGAGACCACCGGGGTGGTGACGCGGATGGAGCAGCTGCTCAACATGGACAC CACCCCCTTCACCGACAAGATCATCGCCGAGTACATCTGGGTTGGAGGAACTGGAATTGA CCTCAGAAGCAAATCAAGGACAATATCAAAACCAGTGGAGGACCCCTCGGAGCTACCAAA ATGGAACTACGATGGATCAAGCACAGGGCAAGCTCCAGGAGAAGATAGTGAAGTCATCTT ATACCCACAGGCTATATTCAAGGACCCATTTCGAGGTGGCAACAACATATTGGTTATGTG TGATACCTACACACCAGCTGGGGAACCCATCCCTACTAACAAACGTAACAGGGCTGCACA AGTATTCAGTGATCCAAAGGTTGTCAGCCAAGTGCCATGGTTTGGAATAGAACAGGAGTA CACTTTGCTCCAGAGAGACGTAAACTGGCCTCTTGGCTGGCCCGTTGGAGGCTACCCTGG GCCCCAGGGTCCATACTACTGCGCTGTAGGATCGGACAAATCGTTTGGCCGTGACATATC AGATGCTCACTACAAGGCATGTCTTTATGCTGGAATTAACATTAGTGGAACAAATGGAGA GGTCATGCCTGGTCAGTGGGAGTACCAGGTTGGACCTAGTGTCGGTATTGAAGCTGGAGA CCACATATGGATTTCAAGATATATTCTTGAGAGAATAACGGAGCAGGCTGGTGTAGTGCT TACCCTTGACCCCAAACCAATTCAGGGAGACTGGAATGGAGCTGGGTGCCACACAAACTA CAGCACCAAGAGTATGCGTGAAGATGGAGGATTTGAGGTGATCAAGAAGGCAATCCTAAA CCTATCACTTCGCCATGACTTGCATATAAGTGCATATGGTGAAGGAAATGAAAGGAGGTT GACAGGTTTACACGAGACAGCTAGCATTGACAATTTCTCATGGGGTGTGGCAAACCGTGG ATGCTCTATTCGGGTGGGGCGAGACACCGAGGCGAAGGGAAAAGGCTACTTGGAAGACCG TCGCCCGGCATCAAACATGGACCCGTACGTCGTGACAGCGCTATTGGCTGAAACCACAAT TCTTTGGGAGCCAACCCTCGAAGCGGAGGTTCTTGCTGCTAAGAAGTTGGCCCTGAAGGT ATGAAGAACTTGGACGATGAATCGGGGCAAATAAATCCCAGCAAAATTTGTTTGCTGCCC ACCAGTCTTGATCTTGTATTTCTTCTGTCTGGGGATTGGTCTGTACAAATCTGCAGTTTC TAGAAAACCACGCCACCTTCCATTCGCCAGTTAACATTTTGGTTGAACACCACACTTGAT CTGGGTCTGTATTTTGAGTCCATTTGTGAGTGACAGAACGGATGATGAAACACATCAGGG ACACTTTTAAGTTTCTTCAGTCCTGCGTCCTTCCCTCGAAATAAAAATGTTTCCTTGTTT TTT