Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0658700-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:33594301:33596091:1 gene:Os04g0658700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RECEPTOR-LIKE CYTOPLASMIC KINASE 171 description:Similar to OSIGBa0132E09-OSIGBa0108L24.8 protein. (Os04t0658700-00)
Sequence

ATGGCGAACCCAAATGCGAGTGCGGTCTTCCTGGCCTTCATCGTGATTCTCATCATAGTC
ATCTTCATCCTACTTGGTATCTGCTGGAAGTTCCTCAGGCCAGATATCATGAGGAGATTG
ATGAGGCCAAAGAGGGCTCCGTCAGAGGTACCCGAGTATTTCAGCGGCAACATGAGCGGC
AATCTGCGCACAATAACATACTTTGATTATGCAACACTGAAGAAGGCCACGAGGGATTTC
CACCAGAAGAATCAGCTCGGGAGAGGAGGCTTTGGACCTGTTTATCTGGGGAAACTAGAC
GATGGCAGGAAGGTTGCTGTGAAGCAGCTGAGCGTCGGCAAGTCAGGTCAGGGCGAGTCC
GAGTTCTTCGTCGAGGTGAACATGATAACCAGCATCCAGCACAAGAACCTTGTTCGCCTT
GTGGGCTGCTGCTCGGAGGGCCAGCAACGGCTGCTCGTCTACGAGTACATGAAGAACAAG
AGCTTGGACAAGATACTGTTTGGTGTTGATGGTGCACCATTTCTGAACTGGAAGACGCGG
CACCAGATCATCATCGGCATCGCGAGAGGCCTGCAGTACCTGCACGAGGAGTCCAACCTG
AGGATTGTTCATCGCGACATCAAGGCGAGCAACATCCTCCTGGACGATAAGTTTCAGCCC
AAGATCAGTGACTTTGGCTTGGCAAGATTCTTCCCCGAGGACCAGACATACCTCAGCACG
GCATTTGCCGGCACACTAGGCTACACGGCGCCTGAATACGCCATCAGAGGGGAGCTCACA
GTGAAAGCCGACACCTACAGCTTCGGAGTTCTCGTGCTCGAGATCGTCAGCAGCAGGAAG
AACACGGATCTCTCTCTCCCGAACGAAATGCAGTACCTGCCTGAACATGCATGGAGGCTG
TACGAGCAATCCAAGATACTGGAGCTGGTCGACGCGAAGCTGCAGGCCGACGGGTTCGAC
GAGAAGGAGGTGATGCAGGTGTGCCAGATCGCGCTGCTCTGCGTGCAGCCATTCCCGAAC
CTGAGGCCGGCGATGTCGGAGGTGGTGCTAATGCTCACCATGAAGACGACGGAGCAGTCC
GTCATCCCCGCGCCGGTGAGGCCGGCGTTCCTGGACAGGAAGAGCCTCAAGGACAAGAAC
AACGGCGGCGGCTCGGACACGGCGGCGGAGATGAGGTCGACGGCGTACTGGCTCGGCACG
CCGTCGCCGATGGTCGACAGGCCGTACGACATGAGCTGTGGCATATAA

Peptide Sequence

PEP ID

Os04t0658700-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:33594301:33596091:1 gene:Os04g0658700 transcript:Os04t0658700-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RECEPTOR-LIKE CYTOPLASMIC KINASE 171 description:Similar to OSIGBa0132E09-OSIGBa0108L24.8 protein. (Os04t0658700-00)
Sequence

MANPNASAVFLAFIVILIIVIFILLGICWKFLRPDIMRRLMRPKRAPSEVPEYFSGNMSG
NLRTITYFDYATLKKATRDFHQKNQLGRGGFGPVYLGKLDDGRKVAVKQLSVGKSGQGES
EFFVEVNMITSIQHKNLVRLVGCCSEGQQRLLVYEYMKNKSLDKILFGVDGAPFLNWKTR
HQIIIGIARGLQYLHEESNLRIVHRDIKASNILLDDKFQPKISDFGLARFFPEDQTYLST
AFAGTLGYTAPEYAIRGELTVKADTYSFGVLVLEIVSSRKNTDLSLPNEMQYLPEHAWRL
YEQSKILELVDAKLQADGFDEKEVMQVCQIALLCVQPFPNLRPAMSEVVLMLTMKTTEQS
VIPAPVRPAFLDRKSLKDKNNGGGSDTAAEMRSTAYWLGTPSPMVDRPYDMSCGI

Transcript Sequence

Transcript ID

Os04t0658700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:33594301:33596091:1 gene:Os04g0658700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RECEPTOR-LIKE CYTOPLASMIC KINASE 171 description:Similar to OSIGBa0132E09-OSIGBa0108L24.8 protein. (Os04t0658700-00)
Sequence

AGCAACAATGGCGAACCCAAATGCGAGTGCGGTCTTCCTGGCCTTCATCGTGATTCTCAT
CATAGTCATCTTCATCCTACTTGGTATCTGCTGGAAGTTCCTCAGGCCAGATATCATGAG
GAGATTGATGAGGCCAAAGAGGGCTCCGTCAGAGGTACCCGAGTATTTCAGCGGCAACAT
GAGCGGCAATCTGCGCACAATAACATACTTTGATTATGCAACACTGAAGAAGGCCACGAG
GGATTTCCACCAGAAGAATCAGCTCGGGAGAGGAGGCTTTGGACCTGTTTATCTGGGGAA
ACTAGACGATGGCAGGAAGGTTGCTGTGAAGCAGCTGAGCGTCGGCAAGTCAGGTCAGGG
CGAGTCCGAGTTCTTCGTCGAGGTGAACATGATAACCAGCATCCAGCACAAGAACCTTGT
TCGCCTTGTGGGCTGCTGCTCGGAGGGCCAGCAACGGCTGCTCGTCTACGAGTACATGAA
GAACAAGAGCTTGGACAAGATACTGTTTGGTGTTGATGGTGCACCATTTCTGAACTGGAA
GACGCGGCACCAGATCATCATCGGCATCGCGAGAGGCCTGCAGTACCTGCACGAGGAGTC
CAACCTGAGGATTGTTCATCGCGACATCAAGGCGAGCAACATCCTCCTGGACGATAAGTT
TCAGCCCAAGATCAGTGACTTTGGCTTGGCAAGATTCTTCCCCGAGGACCAGACATACCT
CAGCACGGCATTTGCCGGCACACTAGGCTACACGGCGCCTGAATACGCCATCAGAGGGGA
GCTCACAGTGAAAGCCGACACCTACAGCTTCGGAGTTCTCGTGCTCGAGATCGTCAGCAG
CAGGAAGAACACGGATCTCTCTCTCCCGAACGAAATGCAGTACCTGCCTGAACATGCATG
GAGGCTGTACGAGCAATCCAAGATACTGGAGCTGGTCGACGCGAAGCTGCAGGCCGACGG
GTTCGACGAGAAGGAGGTGATGCAGGTGTGCCAGATCGCGCTGCTCTGCGTGCAGCCATT
CCCGAACCTGAGGCCGGCGATGTCGGAGGTGGTGCTAATGCTCACCATGAAGACGACGGA
GCAGTCCGTCATCCCCGCGCCGGTGAGGCCGGCGTTCCTGGACAGGAAGAGCCTCAAGGA
CAAGAACAACGGCGGCGGCTCGGACACGGCGGCGGAGATGAGGTCGACGGCGTACTGGCT
CGGCACGCCGTCGCCGATGGTCGACAGGCCGTACGACATGAGCTGTGGCATATAA