Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0658600-02
CDS Infomation	cds chromosome:IRGSP-1.0:4:33589945:33591754:-1 gene:Os04g0658600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0132E09-OSIGBa0108L24.7 protein. (Os04t0658600-01);Nucleolar, Nop52 family protein. (Os04t0658600-02)
Sequence	GCATCGGCCGAGGCCGCGGCCATCGCGCGGCGCCTGGCCTCCTGCAACGGCTCCGCACGG GAGCGCGCGGTGCGGCACCTCCTCTCCACCTTCCTCCCGGCCTCGGCTCCGCACCTCTCC GCCTCCGACCTCCTCAAGCTCTGGAAGGGCCTCTTCTTCTGCTTCTGGCACTCCGACAAG CCGCTCTACCAGTCCTCCCTCGCCACCCGCCTCGCCGCCGGCGTCTCCTCGGGCCCCTCG CCGGCCGCCGCCGCCGCCTTCTTCGCCGCCTACCTCGCCACCCTCCGCCGCGAGTGGGTC CACATCGACACCCACCGCCTCGACAAGTTCTACCTCCTCAACCGCAGGTTCCTCCACCAC GCCTTCCTCCTCCTCGCCGCCAACTCCTTCGCCGCCGACCTCACCTCCCAGGTCGTATCG ATCCTGTCGGAGAAGGTACTCCTTCCCGAGGCCGACAACGTCGCCGCCGGCTCGCCCCGT GGGCTTGGGTACCATGTCGCCGAGGTGTTTCTGGACGAGCTGTCGCCTGTGCTCCCTGTG AGCTTACAGACAATGGAGGTGTTGCTATCTCCTTTCTTCGCTGTGTTGGAGAAGTCATCT GATAGGGTGATGGTGGCTAAGGTTAAGTCTAGTGTGTTTGAGAGGTTCCTCGAGAGCGGC AAACAATTGCTCGAGATGGCGAAGAAAGGCGAGGGGGTGGAGAAGGGGAGCGCAGACGAG AAGATTGGGAAGGTTGGCTTGCTGTTTGGGTTCAGCAAGAGGTTCTCAGATATTGGGGCG AAGGCGGAGACCGTGCAAGCAAACCGAAAGGTGCTATTTGGGCTGAGGGATGCGTTTGTG AAGGTTGAGAAAGGATTGGAGCTCTCTGGGGTCGAGATTGCTGTGCCAGAGTTCAAGAGT ACCGAGGTGACAGGGGTGGAGAATGGCATGGATTTGGATGAGGTGAAGGTGGAGAAGAAG AAGAAGAAAAAGGCGAAGAAAGCTTCATTGGTGGAAGGTGAGACAGAGGGGGCCAAGGAT TCAAAGCAAGAGAAAAAGGTCAAGAAGGAGAAGAAAGAGAAGAAGAAAAAGAAGAAGGTA GAGGTTGTTGATGAGGGAGATGTCACGGAACAGAGTACAGACGCTCCTGCAGAGGAGGAC CAACAGATGGGTGATGGTACTGAGGCTGTTACATTTGATGAGACATTGATGTCCAATCTC CAGAAGCAGTTTGAGAAGGCTGCAGCAGAAGCTGGTATGGTCAATGGAGGCAGCAGCTCA AGTGCTTTGCCCGCTAGTGGGAAAGCTGCAAAGAAAAGGAAGAGAGCAAAATCTGCAGAT AGGTTATCGGTTTCTGATGGAGACGATGTTAGCAGCGAAGGTACAATTATTTCCCAGGAT GGGGAGAAGAGCGGTAAGAAAGTGAGGTTCTCGATGAAGAATAATCTAGTTTGGAAGCCT CACAATCCTTTGCCGCCGCAGTGCTTGAGGCTGCCACCATCTGCTACTCCAAGAGGGAGT GCACTAAAAAAGGGTGTTCTGCCTGGGCCTATAAAAGAAACGCCTACGCCTGTGAAGAAG ACTAAGCCAAAAGCGAAATCTGCAAAGAAGGTCTTGAAGAAGCCTTCCTCAGCCGCGAAG CGCTTGCGGAAGTTGCAAAATTTCTCTGCATGA

Peptide Sequence

PEP ID	Os04t0658600-02
PEP Infomation	pep chromosome:IRGSP-1.0:4:33589945:33591754:-1 gene:Os04g0658600 transcript:Os04t0658600-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0132E09-OSIGBa0108L24.7 protein. (Os04t0658600-01);Nucleolar, Nop52 family protein. (Os04t0658600-02)
Sequence	ASAEAAAIARRLASCNGSARERAVRHLLSTFLPASAPHLSASDLLKLWKGLFFCFWHSDK PLYQSSLATRLAAGVSSGPSPAAAAAFFAAYLATLRREWVHIDTHRLDKFYLLNRRFLHH AFLLLAANSFAADLTSQVVSILSEKVLLPEADNVAAGSPRGLGYHVAEVFLDELSPVLPV SLQTMEVLLSPFFAVLEKSSDRVMVAKVKSSVFERFLESGKQLLEMAKKGEGVEKGSADE KIGKVGLLFGFSKRFSDIGAKAETVQANRKVLFGLRDAFVKVEKGLELSGVEIAVPEFKS TEVTGVENGMDLDEVKVEKKKKKKAKKASLVEGETEGAKDSKQEKKVKKEKKEKKKKKKV EVVDEGDVTEQSTDAPAEEDQQMGDGTEAVTFDETLMSNLQKQFEKAAAEAGMVNGGSSS SALPASGKAAKKRKRAKSADRLSVSDGDDVSSEGTIISQDGEKSGKKVRFSMKNNLVWKP HNPLPPQCLRLPPSATPRGSALKKGVLPGPIKETPTPVKKTKPKAKSAKKVLKKPSSAAK RLRKLQNFSA

Transcript Sequence

Transcript ID	Os04t0658600-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:33589945:33591754:-1 gene:Os04g0658600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0132E09-OSIGBa0108L24.7 protein. (Os04t0658600-01);Nucleolar, Nop52 family protein. (Os04t0658600-02)
Sequence	ACGCATCGGCCGAGGCCGCGGCCATCGCGCGGCGCCTGGCCTCCTGCAACGGCTCCGCAC GGGAGCGCGCGGTGCGGCACCTCCTCTCCACCTTCCTCCCGGCCTCGGCTCCGCACCTCT CCGCCTCCGACCTCCTCAAGCTCTGGAAGGGCCTCTTCTTCTGCTTCTGGCACTCCGACA AGCCGCTCTACCAGTCCTCCCTCGCCACCCGCCTCGCCGCCGGCGTCTCCTCGGGCCCCT CGCCGGCCGCCGCCGCCGCCTTCTTCGCCGCCTACCTCGCCACCCTCCGCCGCGAGTGGG TCCACATCGACACCCACCGCCTCGACAAGTTCTACCTCCTCAACCGCAGGTTCCTCCACC ACGCCTTCCTCCTCCTCGCCGCCAACTCCTTCGCCGCCGACCTCACCTCCCAGGTCGTAT CGATCCTGTCGGAGAAGGTACTCCTTCCCGAGGCCGACAACGTCGCCGCCGGCTCGCCCC GTGGGCTTGGGTACCATGTCGCCGAGGTGTTTCTGGACGAGCTGTCGCCTGTGCTCCCTG TGAGCTTACAGACAATGGAGGTGTTGCTATCTCCTTTCTTCGCTGTGTTGGAGAAGTCAT CTGATAGGGTGATGGTGGCTAAGGTTAAGTCTAGTGTGTTTGAGAGGTTCCTCGAGAGCG GCAAACAATTGCTCGAGATGGCGAAGAAAGGCGAGGGGGTGGAGAAGGGGAGCGCAGACG AGAAGATTGGGAAGGTTGGCTTGCTGTTTGGGTTCAGCAAGAGGTTCTCAGATATTGGGG CGAAGGCGGAGACCGTGCAAGCAAACCGAAAGGTGCTATTTGGGCTGAGGGATGCGTTTG TGAAGGTTGAGAAAGGATTGGAGCTCTCTGGGGTCGAGATTGCTGTGCCAGAGTTCAAGA GTACCGAGGTGACAGGGGTGGAGAATGGCATGGATTTGGATGAGGTGAAGGTGGAGAAGA AGAAGAAGAAAAAGGCGAAGAAAGCTTCATTGGTGGAAGGTGAGACAGAGGGGGCCAAGG ATTCAAAGCAAGAGAAAAAGGTCAAGAAGGAGAAGAAAGAGAAGAAGAAAAAGAAGAAGG TAGAGGTTGTTGATGAGGGAGATGTCACGGAACAGAGTACAGACGCTCCTGCAGAGGAGG ACCAACAGATGGGTGATGGTACTGAGGCTGTTACATTTGATGAGACATTGATGTCCAATC TCCAGAAGCAGTTTGAGAAGGCTGCAGCAGAAGCTGGTATGGTCAATGGAGGCAGCAGCT CAAGTGCTTTGCCCGCTAGTGGGAAAGCTGCAAAGAAAAGGAAGAGAGCAAAATCTGCAG ATAGGTTATCGGTTTCTGATGGAGACGATGTTAGCAGCGAAGGTACAATTATTTCCCAGG ATGGGGAGAAGAGCGGTAAGAAAGTGAGGTTCTCGATGAAGAATAATCTAGTTTGGAAGC CTCACAATCCTTTGCCGCCGCAGTGCTTGAGGCTGCCACCATCTGCTACTCCAAGAGGGA GTGCACTAAAAAAGGGTGTTCTGCCTGGGCCTATAAAAGAAACGCCTACGCCTGTGAAGA AGACTAAGCCAAAAGCGAAATCTGCAAAGAAGGTCTTGAAGAAGCCTTCCTCAGCCGCGA AGCGCTTGCGGAAGTTGCAAAATTTCTCTGCATGAACTCTTTTATGAATTGACACTGCAG TGATCATGCTTTCTGCATGGTGTGTCTTTTCAACCGTGTTCTATTATTACTTAATTCTTC ACCTAGGTTAGTCTTATACGCTGTTGACTATGCAACAAATTTATATTTATGGATTGTTTA ATGTTGTGTT