Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0656800-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:33500008:33506112:-1 gene:Os04g0656800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:class III peroxidase 58 description:Similar to Peroxidase precursor (EC 1.11.1.7). (Os04t0656800-01)
Sequence	ATGGCCAGGGCGGCGCACGGCGGCGGCGGCATGGGGCTTCTCGTGGCATTCGTGGCGCTT GTGGGCGTCGGCGGCGGCGCGAGGGCCCAGCTGCGGCAGAACTACTACGGCAGCACGTGC CCCAACGCGGAGTCCACCGTCCGGTCCGTCATCTCGCAGCACCTCCAGCAGAGCTTCGCC GTCGGCCCCGGCACCCTCCGCCTCTTCTTCCACGACTGCTTCGTCAGGGGGTGTGACGCG TCGGTGATGCTGATGGCGCCGAACGGCGACGACGAGAGCCACAGCGGCGCGGACGCCACG CTGTCGCCGGACGCGGTGGAGGCGATCAACAAGGCCAAGGCGGCGGTCGAGGCGCTCCCC GGCTGCGCCGGCAAGGTCTCCTGCGCGGACATCCTCGCCATGGCCGCCCGCGACGTCGTC TCCCTGACCGGCGGGCCGAGCTACTCCGTGGAGCTCGGACGGCTGGACGGCAAGACGTTC AACAGAGCCATTGTCAAGCACGTCCTGCCCGGCCCTGGCTTCAATCTGGATCAGCTCAAC TCCTTGTTCGCCAGCAATGGCCTAACGCAGACCGACATGATTGCGCTTTCCGGGGCGCAC ACGATCGGGGTGACGCACTGCGACAAGTTCGTGCGGCGGATCTACACGTTCAAGCAGCGG CTGGGGTACAACCCGCCGATGAACCTGGACTTCCTGCGGTCGATGCGGCGGGTGTGCCCG ATCAACTACAGCCCGACGGCGTTCGCGATGCTGGACGTGTCGACGCCGCGGGCGTTCGAC AACGCCTACTTCAACAACCTCCGCTACAACAAGGGCCTCCTCGCCTCCGACCAGATCCTC TTCACCGACCGCCGCTCCCGCCCCACCGTCAACCTCTTCGCCGCCAACTCCACCGCCTTC TTCGACGCCTTCGTCGCCGCCATGGCCAAGCTCGGCAGGATCGGCGTCAAGACCGGCTCC GACGGCGAGATCCGCCGCGTCTGCACCGCCGTCAACTAG

Peptide Sequence

PEP ID	Os04t0656800-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:33500008:33506112:-1 gene:Os04g0656800 transcript:Os04t0656800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:class III peroxidase 58 description:Similar to Peroxidase precursor (EC 1.11.1.7). (Os04t0656800-01)
Sequence	MARAAHGGGGMGLLVAFVALVGVGGGARAQLRQNYYGSTCPNAESTVRSVISQHLQQSFA VGPGTLRLFFHDCFVRGCDASVMLMAPNGDDESHSGADATLSPDAVEAINKAKAAVEALP GCAGKVSCADILAMAARDVVSLTGGPSYSVELGRLDGKTFNRAIVKHVLPGPGFNLDQLN SLFASNGLTQTDMIALSGAHTIGVTHCDKFVRRIYTFKQRLGYNPPMNLDFLRSMRRVCP INYSPTAFAMLDVSTPRAFDNAYFNNLRYNKGLLASDQILFTDRRSRPTVNLFAANSTAF FDAFVAAMAKLGRIGVKTGSDGEIRRVCTAVN

Transcript Sequence

Transcript ID	Os04t0656800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:33500008:33506112:-1 gene:Os04g0656800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:class III peroxidase 58 description:Similar to Peroxidase precursor (EC 1.11.1.7). (Os04t0656800-01)
Sequence	CTCGCTCCCGCGTCCCACCACCACCCTCAAAGCAGACCACACACTGTGTCGCTGTCACAC ACACACCGGGCCGAGCTGAGCCTGAGCTTGTTCGGCGATGGCCAGGGCGGCGCACGGCGG CGGCGGCATGGGGCTTCTCGTGGCATTCGTGGCGCTTGTGGGCGTCGGCGGCGGCGCGAG GGCCCAGCTGCGGCAGAACTACTACGGCAGCACGTGCCCCAACGCGGAGTCCACCGTCCG GTCCGTCATCTCGCAGCACCTCCAGCAGAGCTTCGCCGTCGGCCCCGGCACCCTCCGCCT CTTCTTCCACGACTGCTTCGTCAGGGGGTGTGACGCGTCGGTGATGCTGATGGCGCCGAA CGGCGACGACGAGAGCCACAGCGGCGCGGACGCCACGCTGTCGCCGGACGCGGTGGAGGC GATCAACAAGGCCAAGGCGGCGGTCGAGGCGCTCCCCGGCTGCGCCGGCAAGGTCTCCTG CGCGGACATCCTCGCCATGGCCGCCCGCGACGTCGTCTCCCTGACCGGCGGGCCGAGCTA CTCCGTGGAGCTCGGACGGCTGGACGGCAAGACGTTCAACAGAGCCATTGTCAAGCACGT CCTGCCCGGCCCTGGCTTCAATCTGGATCAGCTCAACTCCTTGTTCGCCAGCAATGGCCT AACGCAGACCGACATGATTGCGCTTTCCGGGGCGCACACGATCGGGGTGACGCACTGCGA CAAGTTCGTGCGGCGGATCTACACGTTCAAGCAGCGGCTGGGGTACAACCCGCCGATGAA CCTGGACTTCCTGCGGTCGATGCGGCGGGTGTGCCCGATCAACTACAGCCCGACGGCGTT CGCGATGCTGGACGTGTCGACGCCGCGGGCGTTCGACAACGCCTACTTCAACAACCTCCG CTACAACAAGGGCCTCCTCGCCTCCGACCAGATCCTCTTCACCGACCGCCGCTCCCGCCC CACCGTCAACCTCTTCGCCGCCAACTCCACCGCCTTCTTCGACGCCTTCGTCGCCGCCAT GGCCAAGCTCGGCAGGATCGGCGTCAAGACCGGCTCCGACGGCGAGATCCGCCGCGTCTG CACCGCCGTCAACTAGCTTGTTTACGTAGTACTTGCATATCATCTTCTGCTACTTAAAAA GTGGAGTACTTAGCTGGGTAGGATGGTGAAAGAAAAACACGTAGTAGTAGTACTACGATT AATTAATTTCGGCCGCAGATGCAGGGTGTTTTTTTTCTTTTCTTTTTATTTTTGGTTTCT TTTTGTTGTTTATATGTTTTGTGGTGGGATTTTGTAGCCGATTCTTTGAGCTGAG