Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0656500-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:33488722:33492700:1 gene:Os04g0656500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LIGULELESS 1 description:Similar to Squamosa-promoter binding-like protein 3. (Os04t0656500-01)
Sequence	ATGATGAACGTTCCATCCGCCGCTGCCGCGAGCTCCTGCGATGATTTCGGCTACAACGCC ACCCCGCCGCCGCCGCCGTCGCTTCTCCCAATCATGGACCAGGACGGCGGCGGCGGTAGC ATCCAGAGGGATCACCACCAACACCACAACCACCAGCAGCTCGGCTACAACCTGGAGCCG AGCTCCCTAGCTCTGCTTCCCCCTTCCAACGCCGCCGCCGCCGCAGCACACCACGCCACC ATCGCCCACGCCTCCCCACATGACCTCCTCCAGTTCTACCCGACCTCGCACTACCTCGCC GCTGCCGGCGGCGCCGGTGGCGGAGGCAACCCCTACAGCCACTTCACGGCGGCGGCGGCG GCCGGGAGCACCTTCCAGTCGTACTACCAGCAGCCGCCGCAGGACGCGCCGGAGTACTAC TTCCCGACGCTGGTCAGCTCCGCCGAGGAGAACATGGCCAGCTTCGCCGCCACCCAGCTC GGCCTCAACCTCGGCTACCGGACCTACTTCCCGCCGAGAGGCGGCTACACCTACGGCCAC CACCCGCCGCGGTGCCAGGCCGAGGGCTGCAAGGCCGACCTCTCCAGCGCCAAGCGCTAC CACCGCCGCCACAAGGTGTGCGAGCACCACTCCAAGGCGCCCGTCGTCGTCACCGCCGGC GGCCTCCACCAGAGATTCTGCCAGCAGTGCAGCAGATTCCATCTTCTTGATGAGTTCGAC GATGCCAAGAAGAGCTGCAGGAAGCGACTCGCCGACCACAACCGCCGGCGGAGGAAGTCG AAGCCGTCCGACGGCGAGCATTCTGGTGAAAAGAGAAGGGCGCAGGCGAATAAATCGGCA GCTACTAAAGACAAAGCAGGAAGTAGCAGCAAGAACGCAGGCATTGGAGACGGTTTCGAG ACACAGCTACTGGGGGGTGCACACATGTCCAAAGATCAAGACCAAGCCATGGATCTGGGA GAGGTGGTGAAAGAAGCTGTAGATCCCAAAGGTAAGGCATCGATGCAGCAGCAGCAGCAG CAAGCACATCATGGGATTCATCAGCAGAGCCACCAGCAGCATGGCTTCCCTTTCCCTTCG TCGTCTGGCTCGTGCTTATTCCCTCAGAGCCAAGGAGCTGTCTCGAGCACTGACACATCA AATATAGCTCAAGTGCAAGAACCAAGCTTAGCCTTCCATCAGCAGCATCACCAACACAGC AACATCCTTCAGCTTGGACAGGCGATGTTTGATCTCGACTTCGATCACTAG

Peptide Sequence

PEP ID	Os04t0656500-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:33488722:33492700:1 gene:Os04g0656500 transcript:Os04t0656500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LIGULELESS 1 description:Similar to Squamosa-promoter binding-like protein 3. (Os04t0656500-01)
Sequence	MMNVPSAAAASSCDDFGYNATPPPPPSLLPIMDQDGGGGSIQRDHHQHHNHQQLGYNLEP SSLALLPPSNAAAAAAHHATIAHASPHDLLQFYPTSHYLAAAGGAGGGGNPYSHFTAAAA AGSTFQSYYQQPPQDAPEYYFPTLVSSAEENMASFAATQLGLNLGYRTYFPPRGGYTYGH HPPRCQAEGCKADLSSAKRYHRRHKVCEHHSKAPVVVTAGGLHQRFCQQCSRFHLLDEFD DAKKSCRKRLADHNRRRRKSKPSDGEHSGEKRRAQANKSAATKDKAGSSSKNAGIGDGFE TQLLGGAHMSKDQDQAMDLGEVVKEAVDPKGKASMQQQQQQAHHGIHQQSHQQHGFPFPS SSGSCLFPQSQGAVSSTDTSNIAQVQEPSLAFHQQHHQHSNILQLGQAMFDLDFDH

Transcript Sequence

Transcript ID	Os04t0656500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:33488722:33492700:1 gene:Os04g0656500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LIGULELESS 1 description:Similar to Squamosa-promoter binding-like protein 3. (Os04t0656500-01)
Sequence	GCCCTCCTGCTCGATCCATCCATCCATCCACCCGAACCCTAGATAGATGAAAAAGGGCAA AACCATGGCATATGCCGCGCGATCCATCTCTGCGCGCTGCTGATATAAGAGATCCATCGA GTAGTAGCCCTGTTAGCTAGAGCGAGCTCGATCGATGGAGAGGATGATGGTGGTGTCCTT GCCGCGTCCTCTCTTCCATACCTAGAACTTTCCGTGTGTGTGCGACTGCGTGAGTAGTGA GGGATAGATAAAGGAGGGAGGAGGAGACAGGCCGCGAGGATGATGAACGTTCCATCCGCC GCTGCCGCGAGCTCCTGCGATGATTTCGGCTACAACGCCACCCCGCCGCCGCCGCCGTCG CTTCTCCCAATCATGGACCAGGACGGCGGCGGCGGTAGCATCCAGAGGGATCACCACCAA CACCACAACCACCAGCAGCTCGGCTACAACCTGGAGCCGAGCTCCCTAGCTCTGCTTCCC CCTTCCAACGCCGCCGCCGCCGCAGCACACCACGCCACCATCGCCCACGCCTCCCCACAT GACCTCCTCCAGTTCTACCCGACCTCGCACTACCTCGCCGCTGCCGGCGGCGCCGGTGGC GGAGGCAACCCCTACAGCCACTTCACGGCGGCGGCGGCGGCCGGGAGCACCTTCCAGTCG TACTACCAGCAGCCGCCGCAGGACGCGCCGGAGTACTACTTCCCGACGCTGGTCAGCTCC GCCGAGGAGAACATGGCCAGCTTCGCCGCCACCCAGCTCGGCCTCAACCTCGGCTACCGG ACCTACTTCCCGCCGAGAGGCGGCTACACCTACGGCCACCACCCGCCGCGGTGCCAGGCC GAGGGCTGCAAGGCCGACCTCTCCAGCGCCAAGCGCTACCACCGCCGCCACAAGGTGTGC GAGCACCACTCCAAGGCGCCCGTCGTCGTCACCGCCGGCGGCCTCCACCAGAGATTCTGC CAGCAGTGCAGCAGATTCCATCTTCTTGATGAGTTCGACGATGCCAAGAAGAGCTGCAGG AAGCGACTCGCCGACCACAACCGCCGGCGGAGGAAGTCGAAGCCGTCCGACGGCGAGCAT TCTGGTGAAAAGAGAAGGGCGCAGGCGAATAAATCGGCAGCTACTAAAGACAAAGCAGGA AGTAGCAGCAAGAACGCAGGCATTGGAGACGGTTTCGAGACACAGCTACTGGGGGGTGCA CACATGTCCAAAGATCAAGACCAAGCCATGGATCTGGGAGAGGTGGTGAAAGAAGCTGTA GATCCCAAAGGTAAGGCATCGATGCAGCAGCAGCAGCAGCAAGCACATCATGGGATTCAT CAGCAGAGCCACCAGCAGCATGGCTTCCCTTTCCCTTCGTCGTCTGGCTCGTGCTTATTC CCTCAGAGCCAAGGAGCTGTCTCGAGCACTGACACATCAAATATAGCTCAAGTGCAAGAA CCAAGCTTAGCCTTCCATCAGCAGCATCACCAACACAGCAACATCCTTCAGCTTGGACAG GCGATGTTTGATCTCGACTTCGATCACTAGTATAATTAATATTTATCAATCATCTCGATC TCTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC TCTCTCTCCCTCGTACGTGTGTGTACGTCCAGACATCTCTTTTCATCTTGTCTCTATTAA TTACTGTAATTTGGATATAATAATGATAGCTTATGCGTTATTGTCATGTGTACTGGCAGT TTTCCTCGTTGGAGAAGCTGGTTAATTAGCCGGTACATCAAATTTAGTG