Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0653600-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:33341978:33346528:1 gene:Os04g0653600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PLETHORA 1 description:Similar to AINTEGUMENTA-like protein. (Os04t0653600-01);Non-protein coding transcript. (Os04t0653600-02)
Sequence	ATGGACATGGACACCTCGCACCACTATCCATGGCTCAACTTCTCCCTCGCCCACCACTGT GAAATGGAGGAGGAGGAGAGGGGCGCGGCGGCCGAGCTGGCCGCGATAGCCGGGGCGGCT CCGCCGCCGAAACTGGAGGACTTCCTCGGCGGCGGCTGCAACGGGGGATCAAGCGGTGGC GCTTGCCCGCCGGTCCAGACGACGGCGCCGACGGCCGCCGAGCTGTACGAGTCGGAGCTC AAGTTTCTCGCCGCCGGCTTCCAGCTGAGCGGCGCGGCTGGGGCGGCGCCGCCGGTGCCC GCGCTGTTGCCGGCGGCTGCTCTAGAGCAGACCGACGAGACGAAGCAGCTGGCCTTGCCG CCGCAGGCCGCGGTGGCGCCGCCGCCGGAGCAGAAGAAGGCGGTGGACTCGTTCGGGCAG AGAACGTCTATCTACCGCGGCGTCACACGGCATCGGTGGACCGGAAGGTACGAGGCGCAT CTGTGGGATAACAGCTGCCGGCGTGAGGGCCAGAGCCGCAAGGGACGCCAAGTGTACTTG GGTGGCTATGATAAGGAGGAGAAAGCGGCGAGGGCGTATGATCTTGCCGCGTTGAAGTAC TGGGGTCCTAGCACCACAACCAACTTTCCGGTTGCCGAGTACGAAAAGGAGCTTGAGGAG ATGAAGCATATGACACGCCAGGAGTTTGTAGCTTCACTTAGGAGGAAGAGCAGTGGATTC TCTCGTGGTGCTTCTATATACAGGGGTGTTACAAGACATCACCAGCATGGGCGATGGCAA GCAAGGATCGGAAGAGTGGCTGGCAACAAGGATCTCTACCTCGGAACATTCGGCACTGAG GAGGAAGCTGCAGAAGCTTATGACATCGCGGCGATCAAGTTCCGTGGCCTGAATGCTGTC ACCAACTTTGAGATCGGCCGGTATAACGTGGAGAGCATAATCAGTAGCAACCTTCCAATC GGGAGCATGGCCGGCAACCGGAGCACCAAGGCCGGCCTAGAGCTCGCTCCGTCGAGCTCC GCCGACGCCATCGCCGCCACCGAAGCGAACCACACCGGCGTCGCGCCACCGTCGACGCTT GCGTTCACAGCTCTTCCAATGAAGTATGATCAGGCAGATTACCTGTCATACCTCGCATTG CAGCATCACCAGCAAGGAAACCTTCAGGGGCTAGGCTTCGGTCTCTACAGCTCAGGTGTA AACCTGGATTTCGCAAATGCCAATGGCAATGGAGCCATGTCAAATTGCTACACCAATGTC TCATTACATGAGCAGCAGCAGCAACATCAGCACCAGCATCAGCAGGAGCAGCAGCAAGAT CAACAGGATGATCAGTCACAAAGCTCCAACAACAGCTGCGGCTCCATTCCGTTTGCAACA CCCATAGCTTTCAGTGGGTCATATGAAAGCTCCATGACAGCAGCAGGCACCTTTGGATAC TACCCAAATGTTGCAGCCTTTCAGACACCAATCTTTGGGATGGAATGA

Peptide Sequence

PEP ID	Os04t0653600-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:33341978:33346528:1 gene:Os04g0653600 transcript:Os04t0653600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PLETHORA 1 description:Similar to AINTEGUMENTA-like protein. (Os04t0653600-01);Non-protein coding transcript. (Os04t0653600-02)
Sequence	MDMDTSHHYPWLNFSLAHHCEMEEEERGAAAELAAIAGAAPPPKLEDFLGGGCNGGSSGG ACPPVQTTAPTAAELYESELKFLAAGFQLSGAAGAAPPVPALLPAAALEQTDETKQLALP PQAAVAPPPEQKKAVDSFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYL GGYDKEEKAARAYDLAALKYWGPSTTTNFPVAEYEKELEEMKHMTRQEFVASLRRKSSGF SRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTEEEAAEAYDIAAIKFRGLNAV TNFEIGRYNVESIISSNLPIGSMAGNRSTKAGLELAPSSSADAIAATEANHTGVAPPSTL AFTALPMKYDQADYLSYLALQHHQQGNLQGLGFGLYSSGVNLDFANANGNGAMSNCYTNV SLHEQQQQHQHQHQQEQQQDQQDDQSQSSNNSCGSIPFATPIAFSGSYESSMTAAGTFGY YPNVAAFQTPIFGME

Transcript Sequence

Transcript ID	Os04t0653600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:33341978:33346528:1 gene:Os04g0653600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PLETHORA 1 description:Similar to AINTEGUMENTA-like protein. (Os04t0653600-01);Non-protein coding transcript. (Os04t0653600-02)
Sequence	ATCTTCACCTTCACCTAGCTGCTGCTGCTGCTTCTTCTTCTTCTATCTGCTACTAGTAGC TCGCAGAAAAATACTCGCCTCGATCGACAAGCTCTCGTTGTTACCTTACCATGGACATGG ACACCTCGCACCACTATCCATGGCTCAACTTCTCCCTCGCCCACCACTGTGAAATGGAGG AGGAGGAGAGGGGCGCGGCGGCCGAGCTGGCCGCGATAGCCGGGGCGGCTCCGCCGCCGA AACTGGAGGACTTCCTCGGCGGCGGCTGCAACGGGGGATCAAGCGGTGGCGCTTGCCCGC CGGTCCAGACGACGGCGCCGACGGCCGCCGAGCTGTACGAGTCGGAGCTCAAGTTTCTCG CCGCCGGCTTCCAGCTGAGCGGCGCGGCTGGGGCGGCGCCGCCGGTGCCCGCGCTGTTGC CGGCGGCTGCTCTAGAGCAGACCGACGAGACGAAGCAGCTGGCCTTGCCGCCGCAGGCCG CGGTGGCGCCGCCGCCGGAGCAGAAGAAGGCGGTGGACTCGTTCGGGCAGAGAACGTCTA TCTACCGCGGCGTCACACGGCATCGGTGGACCGGAAGGTACGAGGCGCATCTGTGGGATA ACAGCTGCCGGCGTGAGGGCCAGAGCCGCAAGGGACGCCAAGTGTACTTGGGTGGCTATG ATAAGGAGGAGAAAGCGGCGAGGGCGTATGATCTTGCCGCGTTGAAGTACTGGGGTCCTA GCACCACAACCAACTTTCCGGTTGCCGAGTACGAAAAGGAGCTTGAGGAGATGAAGCATA TGACACGCCAGGAGTTTGTAGCTTCACTTAGGAGGAAGAGCAGTGGATTCTCTCGTGGTG CTTCTATATACAGGGGTGTTACAAGACATCACCAGCATGGGCGATGGCAAGCAAGGATCG GAAGAGTGGCTGGCAACAAGGATCTCTACCTCGGAACATTCGGCACTGAGGAGGAAGCTG CAGAAGCTTATGACATCGCGGCGATCAAGTTCCGTGGCCTGAATGCTGTCACCAACTTTG AGATCGGCCGGTATAACGTGGAGAGCATAATCAGTAGCAACCTTCCAATCGGGAGCATGG CCGGCAACCGGAGCACCAAGGCCGGCCTAGAGCTCGCTCCGTCGAGCTCCGCCGACGCCA TCGCCGCCACCGAAGCGAACCACACCGGCGTCGCGCCACCGTCGACGCTTGCGTTCACAG CTCTTCCAATGAAGTATGATCAGGCAGATTACCTGTCATACCTCGCATTGCAGCATCACC AGCAAGGAAACCTTCAGGGGCTAGGCTTCGGTCTCTACAGCTCAGGTGTAAACCTGGATT TCGCAAATGCCAATGGCAATGGAGCCATGTCAAATTGCTACACCAATGTCTCATTACATG AGCAGCAGCAGCAACATCAGCACCAGCATCAGCAGGAGCAGCAGCAAGATCAACAGGATG ATCAGTCACAAAGCTCCAACAACAGCTGCGGCTCCATTCCGTTTGCAACACCCATAGCTT TCAGTGGGTCATATGAAAGCTCCATGACAGCAGCAGGCACCTTTGGATACTACCCAAATG TTGCAGCCTTTCAGACACCAATCTTTGGGATGGAATGATTTGGGGAGGTGGCACTTTGCA GGCAAAAAGGATGAAGAGCCTGATCCCTGATCAGAGGTGATGAGGATCAAGACTGACATA GTTCATTCTCACACAACAACAACAACAACAAACATAAAGAGCAGGGGAAAAGAGAGGTAA TGTAGTAGTAGTGGTATGATGATAAAGTATGATGCAAACATAGTAGGAAGCAGTATGCAG GAGAGAGATACTGACAGGTCAGAGACAGGAGGAGAAGACTCTGCTAACAAAACGATGCAG CGCAAGCATATTGTTTTATTTTACTGCCCTTTTACCCTTTTGTAGCTTTGTTTTCTTGTG CTTTTGTCATCGCTGAGCTTTGTTTGCCGCTCAGCTTCTTTTGAGCTTTTCTTTCTACTG ACATGATTCTGCAAGTGCCATGATAGCTTAGCCCATGTACAATGGAAGCAGGGACGTCTC TTTGTAGCTTTTGCTTCTTTTCTTTTGTTAGATCGCCTTTGGTAGCGGCCCCTGTTTACT CAAGAAGTTGCTCTCCCTCCACAAGTATACAATGAAATGTACTGCAGGAACT